BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0411000 Os10g0411000|Os10g0411000
(220 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27690.1 | chr1:9636681-9638307 FORWARD LENGTH=434 177 4e-45
AT5G06610.1 | chr5:2029953-2033620 FORWARD LENGTH=369 176 7e-45
AT1G49840.1 | chr1:18452243-18454157 FORWARD LENGTH=495 173 5e-44
AT3G19540.1 | chr3:6780762-6782633 FORWARD LENGTH=486 172 1e-43
AT1G79420.1 | chr1:29871537-29874166 FORWARD LENGTH=418 151 3e-37
AT5G05840.1 | chr5:1757268-1760458 REVERSE LENGTH=440 150 6e-37
AT1G75160.1 | chr1:28209534-28211624 FORWARD LENGTH=396 135 2e-32
AT5G66740.1 | chr5:26647114-26648558 FORWARD LENGTH=371 134 4e-32
AT3G55720.1 | chr3:20679893-20681338 FORWARD LENGTH=439 128 2e-30
>AT1G27690.1 | chr1:9636681-9638307 FORWARD LENGTH=434
Length = 433
Score = 177 bits (449), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 110/160 (68%)
Query: 37 VHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLSAWGDGAAEVIRHGMTGYF 96
+ GLDP T A +F+ A +GEK +DGEDCF L+L P+ L A +GA+E IRH + GYF
Sbjct: 250 LQGLDPRTTAYMFANARCIGEKKIDGEDCFILKLCADPATLKARSEGASETIRHTLFGYF 309
Query: 97 SQRSGLLARLDDSQLTRIQTPGAPAMYWETTVSSRLGDYRAADGAVVAHAGTSVAHLARF 156
SQ++GLL L+DSQLTRIQ G A+YWETT++S L DY+ +G ++AH+G SVA L RF
Sbjct: 310 SQKTGLLVHLEDSQLTRIQNNGGEAVYWETTINSYLEDYKPVEGIMIAHSGRSVATLLRF 369
Query: 157 GADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAPEEV 196
G T M+EAW ID+++FNV GL + FI P E+
Sbjct: 370 GDMSSGHNTKTTMQEAWVIDEISFNVPGLSIDCFIPPSEL 409
>AT5G06610.1 | chr5:2029953-2033620 FORWARD LENGTH=369
Length = 368
Score = 176 bits (447), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 115/162 (70%), Gaps = 2/162 (1%)
Query: 37 VHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLSAWGDGAAEVIRHGMTGYF 96
+ GLDP+TI+SVFS+A+ VGEK ++G+DCF L+L LS D AE+I+H GYF
Sbjct: 189 LQGLDPLTISSVFSSAQFVGEKEINGKDCFILKLSTDQIDLSKRSDSTAEMIKHVAFGYF 248
Query: 97 SQRSGLLARLDDSQLTRIQTPGAPAMYWETTVSSRLGDYRAADGA--VVAHAGTSVAHLA 154
SQ+SGLL L+DS LTRIQ PG YWET++SS + DYRA +G+ V+AH+G + ++
Sbjct: 249 SQKSGLLICLEDSSLTRIQIPGTVPTYWETSMSSWMEDYRAIEGSEVVIAHSGKTDVLIS 308
Query: 155 RFGADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAPEEV 196
RFG + +VTRMEE WTIDDVAF+V GL + FI P+E+
Sbjct: 309 RFGETLKGGISVTRMEEKWTIDDVAFDVPGLSVDCFIPPKEM 350
>AT1G49840.1 | chr1:18452243-18454157 FORWARD LENGTH=495
Length = 494
Score = 173 bits (439), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 37 VHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLSAWGDGAAEVIRHGMTGYF 96
+ GLDP T A++F+ ++ VGE+ V+GEDCF L+L P L A +G AE++RH + GYF
Sbjct: 284 LQGLDPRTTATMFAESKCVGERKVNGEDCFILKLCTDPETLRARSEGPAEIVRHILFGYF 343
Query: 97 SQRSGLLARLDDSQLTRIQTPGAPAMYWETTVSSRLGDYRAADGAVVAHAGTSVAHLARF 156
SQR+GLLA+++DSQLTRIQ+ A+YWETT++S L DY+ +G ++AH+G SV L RF
Sbjct: 344 SQRTGLLAQIEDSQLTRIQSNDGDAVYWETTINSSLDDYKQVEGIMIAHSGRSVVTLFRF 403
Query: 157 GADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAPEEV 196
G +V + T+MEE WTI++VAFNV GL + FI P ++
Sbjct: 404 G-EVAMSHTRTKMEERWTIEEVAFNVPGLSLDCFIPPADL 442
>AT3G19540.1 | chr3:6780762-6782633 FORWARD LENGTH=486
Length = 485
Score = 172 bits (435), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 113/160 (70%), Gaps = 1/160 (0%)
Query: 37 VHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLSAWGDGAAEVIRHGMTGYF 96
+ GLDP T A++F+ A+ +GEK V+GEDCF L+L P L A +G AE+IRH + GYF
Sbjct: 276 LQGLDPRTTAAMFAEAKCIGEKKVNGEDCFILKLCTDPETLKARSEGPAEIIRHVLFGYF 335
Query: 97 SQRSGLLARLDDSQLTRIQTPGAPAMYWETTVSSRLGDYRAADGAVVAHAGTSVAHLARF 156
SQ++GLL ++DS LTRIQ+ G ++WETT +S L DYR +G ++AH+G SV L RF
Sbjct: 336 SQKTGLLVHIEDSHLTRIQSNGGETVFWETTYNSSLDDYRQVEGIMIAHSGHSVVTLFRF 395
Query: 157 GADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAPEEV 196
G +V + T+MEE+WTI++VAFNV GL + FI P ++
Sbjct: 396 G-EVATSHTRTKMEESWTIEEVAFNVPGLSLDCFIPPADL 434
>AT1G79420.1 | chr1:29871537-29874166 FORWARD LENGTH=418
Length = 417
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 105/165 (63%), Gaps = 5/165 (3%)
Query: 36 IVHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLSAWGDGAA--EVIRHGMT 93
++ GLDP T AS+F+ A+ +GE+ + +DCF L++ L D A EVIRH +
Sbjct: 236 LIQGLDPKTTASLFAKAQCLGERRIGDDDCFVLKVSADRDSLLERNDAGAPAEVIRHALY 295
Query: 94 GYFSQRSGLLARLDDSQLTRIQT--PGAPAMYWETTVSSRLGDYRAADGAVVAHAGTSVA 151
GYF Q+SGLL L+DS LTR+ T P A+YWETT+ + +GDYR DG VAH G +VA
Sbjct: 296 GYFCQKSGLLVYLEDSHLTRVMTISPEDEAVYWETTIGTSIGDYRDVDGVAVAHCGRAVA 355
Query: 152 HLARFGADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAPEEV 196
+ RFG + + TRMEE W IDDV F+V GL +SFI P ++
Sbjct: 356 TVFRFG-ETSLQYSRTRMEEIWRIDDVVFDVPGLSLDSFIPPADI 399
>AT5G05840.1 | chr5:1757268-1760458 REVERSE LENGTH=440
Length = 439
Score = 150 bits (379), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Query: 36 IVHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLSAWGDGAAEVIRHGMTGY 95
+ GLDP + A++F+ + +GEK ++ EDCF L+LD PS L A E+IRH + G
Sbjct: 227 FLQGLDPKSTANLFARSVCMGEKKINDEDCFILKLDAEPSALKARSSSNVEIIRHTVWGC 286
Query: 96 FSQRSGLLARLDDSQLTRIQTPGAPAMYWETTVSSRLGDYRAADGAVVAHAGTSVAHLAR 155
FSQR+GLL +L+DS L RI+ +++WETT+ S + DYR DG +VAHAG S L R
Sbjct: 287 FSQRTGLLIQLEDSHLLRIKAQDDNSIFWETTMESLIQDYRTVDGILVAHAGKSSVSLFR 346
Query: 156 FGADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAPEEV 196
FG + + TRMEE W I+++ FN+ GL + F+ P ++
Sbjct: 347 FGEN-SDNHSRTRMEETWEIEEMDFNIKGLSMDCFLPPSDL 386
>AT1G75160.1 | chr1:28209534-28211624 FORWARD LENGTH=396
Length = 395
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 36 IVHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLSAWGDGAAEVIRHGMTGY 95
GLDP AS+F A +GE+ V+GEDCF L+++ +L A EVI H + GY
Sbjct: 232 FFQGLDPRCTASLFLDAVCIGEQPVNGEDCFVLKVETPSDILKAQCSPNTEVIHHTVWGY 291
Query: 96 FSQRSGLLARLDDSQLTRIQTPGAP--AMYWETTVSSRLGDYRAADGAVVAHAGTSVAHL 153
FSQR+GLL + D++L R+++ ++WET++ S + DY D +AH G +V L
Sbjct: 292 FSQRTGLLVKFGDTKLVRVKSGRGKNDGVFWETSMESIIDDYIFVDAVNIAHGGQTVTTL 351
Query: 154 ARFGADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAPEEV 196
R+G V R R+EE W I++V FN+ GLC ESF+ P ++
Sbjct: 352 YRYGGAVNHRR---RIEEKWRIEEVDFNICGLCLESFLPPSDI 391
>AT5G66740.1 | chr5:26647114-26648558 FORWARD LENGTH=371
Length = 370
Score = 134 bits (336), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
Query: 19 TNEKRPRVHADEVSVLTIVHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLS 78
+N++ P + + GLDP + A++F A +GEK ++GEDCF L+L+ +P+V
Sbjct: 191 SNQQTPASTGTPRPLRRFLQGLDPRSTANLFLDATCIGEKIINGEDCFILKLETSPAVRE 250
Query: 79 AWGDGAAEVIRHGMTGYFSQRSGLLARLDDSQLTRIQTPGAPAMYWETTVSSRLGDYRAA 138
A E+I H + GYFSQRSGLL + +DS+L R++T ++WET+ S + DYR
Sbjct: 251 AQSGPNFEIIHHTIWGYFSQRSGLLIQFEDSRLLRMRTKEDEDVFWETSAESVMDDYRYV 310
Query: 139 DGAVVAHAGTSVAHLARFGADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAP 193
D +AH G + + R+G +A +M E W I++V FNV GL + F+ P
Sbjct: 311 DNVNIAHGGKTSVTVFRYGE--ASANHRRQMTEKWRIEEVDFNVWGLSVDHFLPP 363
>AT3G55720.1 | chr3:20679893-20681338 FORWARD LENGTH=439
Length = 438
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Query: 36 IVHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLSAWGDGAAEVIRHGMTGY 95
+ GLDP T A++F+ + VGEKAV+ E+CF L+L+ PS L + E ++H + G
Sbjct: 229 FLQGLDPKTTANLFAGSVCVGEKAVNNEECFVLKLETQPSGLKSRSKSGMETVKHTVWGC 288
Query: 96 FSQRSGLLARLDDSQLTRIQT--PGAPAMYWETTVSSRLGDYRAADGAVVAHAGTSVAHL 153
F QR+GLL +L+D+ L RI+T + WETT + + DY++ DG +AH G + L
Sbjct: 289 FGQRTGLLVQLEDTYLVRIKTGLEDEDMVLWETTSETLIQDYKSIDGIQIAHRGKTRVSL 348
Query: 154 ARFGADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAP 193
R + + + T MEE+W I++V FNV GL + F+ P
Sbjct: 349 LRLDESL-ESHSKTTMEESWEIEEVGFNVKGLSSDFFLPP 387
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,098,201
Number of extensions: 146115
Number of successful extensions: 330
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 318
Number of HSP's successfully gapped: 9
Length of query: 220
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 125
Effective length of database: 8,502,049
Effective search space: 1062756125
Effective search space used: 1062756125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 109 (46.6 bits)