BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0402200 Os10g0402200|AB100408
         (718 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16690.1  | chr5:5474410-5479878 FORWARD LENGTH=735            551   e-157

>AT5G16690.1 | chr5:5474410-5479878 FORWARD LENGTH=735
          Length = 734

 Score =  551 bits (1421), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 308/730 (42%), Positives = 431/730 (59%), Gaps = 43/730 (5%)

Query: 11  TAATNIEPFYVLHKXXXXXXXXXXXXXXXXXXXXXXXXIDVSGLASPNPKPGKRSXXXXX 70
           TA  +I PF+VLHK                             + SP+PK  KRS     
Sbjct: 24  TAENDIRPFFVLHKASSGNHNGKLTGIVKSKRR----------IESPSPKIAKRSEVESV 73

Query: 71  XXXXXXXXXXXXXXXXXFHRVWSKIQSTINEVLRGISLKLFDQVLRWVQESFSAVRSIAR 130
                            F  VWSKI+ TI +VLR  + K+F  +  W++ESF ++ S   
Sbjct: 74  EEEDGQFFSTLRFKV--FETVWSKIEKTIEDVLRNSNSKVFSGIHDWIRESFESIISSGA 131

Query: 131 PSAAEVRQPYPLLTDVICRKIPTAFVLTKNAEFVDDITTFRDLAEYLESNGCHLAKLSAT 190
              +E  + YP+LT    +++ TA VLT+N E VDD+ TF +L  +L+S GCH+AKLS+ 
Sbjct: 132 LKLSEAVRSYPVLTQASSKQLLTAMVLTRNLEMVDDLLTFEELELHLKSQGCHVAKLSSM 191

Query: 191 ELSEKNGVGCCFRSLLRQLLSDVPDVADIFALASWYSAAENYDQPIVVVIDDLEQCSGDV 250
           + S K+GVG C R LLRQ +    DVAD+  LASWY   +N++ P+V+++DD E+C G V
Sbjct: 192 DFSAKSGVGGCLRGLLRQFVMPTVDVADVTILASWYRENKNHENPVVIIVDDTERCCGPV 251

Query: 251 LGELVMMLSEWVIKIPIFFVMGIATTLDAPRKLLSSEDLQRLEPCKLTLGSPSDRMNALV 310
           L +L+++LSEW IK+PIF +MG++T  DAPRK+LS   LQRL   + TL SP++RM+A++
Sbjct: 252 LSDLILILSEWAIKVPIFLIMGVSTAHDAPRKILSVNALQRLCATRFTLSSPAERMDAVL 311

Query: 311 EAILVKPCAGFCISHEVAVFLRNYFFKHDGTITSFISALKLACSKHFSVEPLSFLCMGML 370
           +A+ +KPC+GF +SH+VA+F+R+YF   DGT+TSF+  LK+AC +HFS+EPLS +     
Sbjct: 312 KAVFLKPCSGFTVSHKVALFMRSYFLCQDGTLTSFVRTLKIACLQHFSLEPLSIML---- 367

Query: 371 EEDRENFWHDKFNALPQE--------LRKYASGLPSCTREKDSTKSGDNMVDGLSELMNI 422
               E+F HD  N L  E          K+A  LPS TR K +  + + +   L +L  +
Sbjct: 368 ----EHFCHDGVNQLSGEGTELLTEATMKHAFDLPSVTRNKITRSTFEMLPHFLLDLQRM 423

Query: 423 QKDWSSVLLCLYEAGKHGKVQLLDIFCEAVNPDLHTQK--APN-LPNEKSGTSRR--FID 477
              WS V+LCLYEAGK  K++LLDIFCE ++P+    K  +P+ + N +S  S R   I 
Sbjct: 424 PNPWSIVVLCLYEAGKFDKLRLLDIFCEILDPEARYLKYFSPSEIVNSQSHNSGRNNVIR 483

Query: 478 QVMDTIRYLPVETLFCLLEVWSIHLNGMDKITNKVKELQSTTISTDSVRITK------DK 531
           +V+  +R L    L  +L+ W        +I +KV EL     + ++    +       K
Sbjct: 484 RVLRKLRDLSPSQLSSMLKSWENLTAEFTEINDKVIELHPFMRAVEAAGQRQGLPNSPKK 543

Query: 532 WPRRSTNSTGNSTVALNDKVAMLLDDVTRKFLVSVECLPFHEIVCFKNVSILQSALIGNP 591
              RS +       A+ DKVA +++ + R+++  VE +PFHEI+CFKNV  LQSAL+G+P
Sbjct: 544 HASRSNSKLEKELKAMTDKVATVIEFMLREYMKPVESVPFHEILCFKNVDKLQSALLGDP 603

Query: 592 RRMVQLDLVKSHKHLKCSCCRKNGIAVLASMHDTSIMCNLAQEYGDVINLHDWYISFDGI 651
           R  +QLDL++SH  L C CC + G  +L SMHDTSI+  LAQE+ DVINLHDWY SF  I
Sbjct: 604 RGRIQLDLLESHDILHCVCCSQRGTTLLPSMHDTSILYKLAQEHADVINLHDWYQSFKTI 663

Query: 652 INSVHSKIXXXXXXXXXXXXXXXVAAE----SEAMIQARFCRAVTELQITGLLRMPSKRR 707
           +    SK                +  E    +EA+IQARFCRAV ELQITGL+RMPSKRR
Sbjct: 664 LIPRSSKAKQKSKSSSKSKKRKEICEEPEAPAEALIQARFCRAVMELQITGLIRMPSKRR 723

Query: 708 PDLVQRIAFG 717
           PD VQR+AFG
Sbjct: 724 PDFVQRVAFG 733



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.135    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,967,676
Number of extensions: 541836
Number of successful extensions: 1299
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1296
Number of HSP's successfully gapped: 1
Length of query: 718
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 612
Effective length of database: 8,200,473
Effective search space: 5018689476
Effective search space used: 5018689476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)