BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0400800 Os10g0400800|AK068126
         (493 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G39280.1  | chr4:18281641-18284831 REVERSE LENGTH=486          676   0.0  
AT3G58140.1  | chr3:21529988-21532386 REVERSE LENGTH=430           67   2e-11

>AT4G39280.1 | chr4:18281641-18284831 REVERSE LENGTH=486
          Length = 485

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/493 (66%), Positives = 395/493 (80%), Gaps = 13/493 (2%)

Query: 4   VEACLLAHLNSGGEVPDSRSYASSLRVTHDELEAVIKSLSAFRIVDTTDITKETWVLTDE 63
            E  +L  L +  ++ DS  +++   + H+EL  VIKSL  FR +D  DI KETW+LTDE
Sbjct: 2   AEEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTDE 61

Query: 64  AKGYVAGGSPEAQLVAAIPPEGA-SKDVLREKLG-SVFDIGMKTAAKNKWIGFEKGNKDL 121
            K Y A GSPE QL  A+P EG+ SKD L++KL  +VF IG   A KNKW+  E G +  
Sbjct: 62  GKKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWV--EMGKQ-- 117

Query: 122 VLRKVNTIKDDLQEQLKSLESGEVLSDKVIDDLKRRKLITKEKSIW--YALKKGPQFVAK 179
           V RKV  ++D ++ QL  ++ G+    + I+ LK RKLI  +  IW  Y++KKGP +  +
Sbjct: 118 VSRKVKDVEDKVKGQLLQIQQGKEFDKESINSLKARKLIVPQ--IWKGYSVKKGPNYAPE 175

Query: 180 RKKLATDVTQEHLRSGDWKDLEFKDYNFGAQGQPIAIGYVQPLLEVREEIQNIFLQMGFT 239
           RKK+ATD+T+E+L+  +WK+LEFK+YNF A+G P+  G++  LL+VR++ ++IF+QMGF 
Sbjct: 176 RKKVATDLTRENLQ--NWKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFE 233

Query: 240 EMPTNNYVESSFWNFDALFQPQQHPARDSHDTFFLEAPAATKQLPEDYLEKVKEVHQRGG 299
           EMPTNNYVESSFWNFDALFQPQQHPARDSHDTFFL+ P+ T+ LPEDY+E+VK VH+ GG
Sbjct: 234 EMPTNNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRTLPEDYVERVKRVHESGG 293

Query: 300 YGSKGYGYDWKRDEAEKNLLRTHTTAVSTRMLYKLAQEKPFAPKRYYSIDRVFRNEAVDR 359
           YGS+GY YDWKR+EA KNLLRTHTTAVS+RMLY LAQ KPF PK+Y+SIDRVFRNEAVDR
Sbjct: 294 YGSRGYNYDWKREEANKNLLRTHTTAVSSRMLYALAQ-KPFVPKKYFSIDRVFRNEAVDR 352

Query: 360 THLAEFHQIEGLICDYGLTLGDLIGVLEDFFSSLGMSKLRFKPAYNPYTEPSMEIFSYHE 419
           THLAEFHQIEGLICD GLTLGDLIGVLEDFFS LGMSKLRFKPAYNPYTEPSMEIFSYHE
Sbjct: 353 THLAEFHQIEGLICDRGLTLGDLIGVLEDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHE 412

Query: 420 GLKKWVEVGNSGMFRPEMLLPMGLPEGVNVIAWGLSLERPTMILYGIDNIRDLFGPKVDF 479
           GL KWVE+GNSGMFRPEMLLPMGLPE V VIAWGLSLERPTMILYGIDNIRDLFG KVD 
Sbjct: 413 GLGKWVEIGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGHKVDL 472

Query: 480 NLIKSNPLCRLGL 492
           +LIK NP+CR+G+
Sbjct: 473 DLIKRNPICRIGI 485



>AT3G58140.1 | chr3:21529988-21532386 REVERSE LENGTH=430
          Length = 429

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 93/231 (40%), Gaps = 62/231 (26%)

Query: 253 NFDALFQPQQHPARDSHDTFFLEAPAATKQLPEDYLEKVKEVHQRGGYGSKGYGYDWKRD 312
           NFD +  P  H +R  +DT+++++                                    
Sbjct: 131 NFDDVLVPADHVSRSLNDTYYVDS------------------------------------ 154

Query: 313 EAEKNLLRTHTTAVSTRMLYKLAQEKPFAPKRYYSIDRVFRNEAVDRTHLAEFHQIEGLI 372
              + +LR HT+A    +L K          R+     V+R +++D TH   FHQ+EG  
Sbjct: 155 ---QTVLRCHTSAHQAELLRK-------GHSRFLVTGDVYRRDSIDSTHYPVFHQMEGFC 204

Query: 373 C-----------DYGLTLG-DLIGVLEDFFSSL-GMSKLRFKPAYNPYTEPSMEIFSYHE 419
                       D  L    DL   LE     L G  ++R+   Y P+T PS E+  Y +
Sbjct: 205 VFSPEDWNGSGKDSTLYAAEDLKKCLEGLARHLFGSVEMRWVDTYFPFTNPSFELEIYFK 264

Query: 420 GLKKWVEVGNSGMFRPEMLLPMGLPEGVNVIAWGLSLERPTMILYGIDNIR 470
             + W+EV   G+    +L   GL   V   A+GL LER  M+L+ I +IR
Sbjct: 265 --EDWLEVLGCGVTEQVILKQSGLENNV-AWAFGLGLERLAMVLFDIPDIR 312



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.136    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,316,694
Number of extensions: 499483
Number of successful extensions: 1341
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1338
Number of HSP's successfully gapped: 2
Length of query: 493
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 390
Effective length of database: 8,282,721
Effective search space: 3230261190
Effective search space used: 3230261190
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)