BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0400100 Os10g0400100|AK067274
         (605 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G13780.1  | chr4:7993366-7998433 REVERSE LENGTH=798            953   0.0  
AT3G55400.1  | chr3:20535809-20538999 REVERSE LENGTH=617          161   9e-40
AT5G02680.1  | chr5:605799-607884 FORWARD LENGTH=167               58   1e-08

>AT4G13780.1 | chr4:7993366-7998433 REVERSE LENGTH=798
          Length = 797

 Score =  953 bits (2463), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/600 (73%), Positives = 508/600 (84%), Gaps = 5/600 (0%)

Query: 9   VPVEGRRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCGTDEYGTA 68
           +P+ G+RN+L+TSALPYVNNVPHLGNIIGCVLSAD +ARYCRLRG+N +Y+CGTDEYGTA
Sbjct: 11  LPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTA 70

Query: 69  TETKAMEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNN 128
           TETKA+EE C+P+EICDKYHAIHKEVY+WF ISFD FGRTS+P+QTEVCQ IF KL DN 
Sbjct: 71  TETKALEENCTPKEICDKYHAIHKEVYDWFGISFDKFGRTSTPEQTEVCQAIFNKLWDNK 130

Query: 129 WLSENTMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKC 188
           WLSENTMQQLYC++C++FLADRLVEG CP EGCNYDSARGDQCEKCGKLLN TEL +PKC
Sbjct: 131 WLSENTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLNPTELKDPKC 190

Query: 189 KVCGSTPCVRDTDHXXXXXXXXXXXXXKYIDETSLTGSWSQNAIHATNAWLKEGLKPRCI 248
           KVC +TP +RDTDH              YI +TS+TGSWSQNAI  TNAWL++GL+ RCI
Sbjct: 191 KVCQNTPRIRDTDHLFIELPLLKDRLEAYIKKTSVTGSWSQNAIQTTNAWLRDGLRQRCI 250

Query: 249 TRDLKWGVPVPHEKYKDKVFYVWFDAPIGYISITACYTPEWEKWWKNPENVELYQFMGKD 308
           TRDLKWGVPVPHEKYKDKVFYVWFDAPIGY+SIT+CYT EWEKWWKNPENVELYQFMGKD
Sbjct: 251 TRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPENVELYQFMGKD 310

Query: 309 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDAKSTNIPPE 368
           NVPFHTVMFPST LGT ENWTLMKTISVTEYLNYE GKFSK+KG+GVFGND K TNIP E
Sbjct: 311 NVPFHTVMFPSTQLGTEENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGNDVKDTNIPVE 370

Query: 369 VWRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGSVVPD 428
           VWRYYLLTNRPE SDT F+WTDLQAK N ELL+NLGNF+NRVLSFIAKP+  GYGSV+PD
Sbjct: 371 VWRYYLLTNRPEVSDTSFSWTDLQAKLNGELLSNLGNFVNRVLSFIAKPDNAGYGSVIPD 430

Query: 429 SPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQFWKLY 488
           + D +SH+LT+SLAE V K + +Y++AM+KVK+KQGLK AM ISSEGN YLQ SQFWKLY
Sbjct: 431 AHDAESHSLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNYYLQASQFWKLY 490

Query: 489 KQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPEEHLSFCDEKGEVEKA 548
           K+D   CA V++T+ G+V+LLA LLEPFMP+FS +V +QLNL P+   S  DE+GEV  A
Sbjct: 491 KEDKPLCAVVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQLNLPPQ--FSLSDERGEVLLA 548

Query: 549 KRPWDLIPSGHRIGKPAPLFKGLENEAVKGLREKFAGSQAERKLRTQ---VAAQLEATSI 605
            RPWD++P  HRIG P PLFK LEN+ V   REKFAGSQ++R+ R +   +A QL  T +
Sbjct: 549 SRPWDILPPSHRIGTPQPLFKELENDEVARYREKFAGSQSDRRARDEAANLADQLNKTKL 608



>AT3G55400.1 | chr3:20535809-20538999 REVERSE LENGTH=617
          Length = 616

 Score =  161 bits (408), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 146/594 (24%), Positives = 252/594 (42%), Gaps = 93/594 (15%)

Query: 2   AAAKEAVVPVEGRRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCG 61
           ++++E+ V  EG   VL T+ L YVN  PH+G+     ++AD+ AR+ RL G  V+++ G
Sbjct: 58  SSSQESTVD-EGETFVL-TTPLYYVNAPPHMGSAY-TTIAADSIARFQRLLGKKVIFITG 114

Query: 62  TDEYGTATETKAMEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIF 121
           TDE+G    T A   G +P E CD     ++ +++  DI++D F RT+ P+   + ++ +
Sbjct: 115 TDEHGEKIATSAAANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFY 174

Query: 122 LKLLDNNWLSENTMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNST 181
            ++  N  +     + LYC +C+ +  ++                               
Sbjct: 175 ARVFANGDIYRADYEGLYCVNCEEYKDEK------------------------------- 203

Query: 182 ELVNPKCKVCGSTPCV-RDTDHXXXXXXXXXXXXXKYIDETS--LTGSWSQNAIHATNAW 238
           EL+   C      PCV R  D+               + +    +  S+  N + +   W
Sbjct: 204 ELLENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQNPRFVQPSYRLNEVQS---W 260

Query: 239 LKEGLKPRCITRDL-KWGVPVPHEKYKDKVFYVWFDAPIGYISITACYTPEWEKWWKNPE 297
           +K GL+   I+R L  WG+PVP +    +  YVWFDA +GYIS       +     +N E
Sbjct: 261 IKSGLRDFSISRALVDWGIPVPDDD--KQTIYVWFDALLGYISALTEDNKQ-----QNLE 313

Query: 298 NVELY------QFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTK 351
               +        +GKD + FH V +P+ L+  G    L K +    +L  +  K  K+ 
Sbjct: 314 TAVSFGWPASLHLIGKDILRFHAVYWPAMLMSAG--LELPKMVFGHGFLTKDGMKMGKSL 371

Query: 352 G--------IGVFGNDAKSTNIPPEVWRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNL 403
           G        +  FG         P+  RY+ L      +D  ++        N  L N +
Sbjct: 372 GNTLEPFELVQKFG---------PDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTI 422

Query: 404 GNFINRVLSFIAKPEGTGYGSVVPDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQ 463
           GN +NR L  + K       ++V DS      A    L +TV KL+++     + + +  
Sbjct: 423 GNLLNRTLGLLKK---NCESTLVVDS---TVAAEGVPLKDTVEKLVEKARTNYENLSLSS 476

Query: 464 GLKIAMAISSEGNAYLQESQFWKLYKQDPASCATVMKTSVGIV---YLLACLLEPFMPTF 520
             +  + I + GN Y+ +   W L+KQ   S     K  V I+    ++A  L P  P  
Sbjct: 477 ACEAVLEIGNAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPVAPCL 536

Query: 521 SKDVLQQLNLSPEEH--LSFCDEKGEVEKAKRPWDLIPSGHRIGKPAPLFKGLE 572
           S  +  QL  + ++   +++ D K         W  +  G  + + +P+F  +E
Sbjct: 537 SLRIYSQLGYTEDQFNSITWSDTK---------WGGLKGGQVMEQASPVFARIE 581



>AT5G02680.1 | chr5:605799-607884 FORWARD LENGTH=167
          Length = 166

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/36 (75%), Positives = 28/36 (77%)

Query: 381 ASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAK 416
            SDTLF W DLQAK N E LNNLGN +NR LSFIAK
Sbjct: 87  VSDTLFPWNDLQAKLNGEFLNNLGNSVNRALSFIAK 122



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.134    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,933,282
Number of extensions: 627588
Number of successful extensions: 1415
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1410
Number of HSP's successfully gapped: 4
Length of query: 605
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 501
Effective length of database: 8,255,305
Effective search space: 4135907805
Effective search space used: 4135907805
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)