BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0392600 Os10g0392600|AK108539
         (277 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45130.1  | chr2:18606489-18607754 FORWARD LENGTH=246          233   6e-62
AT2G26660.1  | chr2:11338932-11340703 FORWARD LENGTH=288          204   4e-53
AT5G20150.1  | chr5:6802429-6803367 FORWARD LENGTH=257            194   5e-50
AT5G15330.1  | chr5:4980595-4982043 FORWARD LENGTH=319            164   6e-41

>AT2G45130.1 | chr2:18606489-18607754 FORWARD LENGTH=246
          Length = 245

 Score =  233 bits (595), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 131/270 (48%), Positives = 166/270 (61%), Gaps = 25/270 (9%)

Query: 1   MKFGKRLKKQVEESLPEWRDKFLAYXXXXXXXXXXXXXXXXXXXXXXXEAEFVRLLDGEV 60
           MKFGKR+K+Q++ESLPEWRDKFL Y                       E+ FV LL+ E+
Sbjct: 1   MKFGKRIKEQIQESLPEWRDKFLRYKELKNLISSPAPV----------ESIFVGLLNAEI 50

Query: 61  DRINAFFLEQEEEFVIRQRELQETVEKVXXXXXXXXXXXXXXXXXVRKEIVDLHGEMVLL 120
           D+ NAFF+EQEE+F+I  +ELQ  ++++                 +RK+IV+ HGEMVLL
Sbjct: 51  DKFNAFFVEQEEDFIIHHKELQYRIQRLVEKCGHNDEMSRENISEIRKDIVNFHGEMVLL 110

Query: 121 LNYSAVNYTGLAKILKKYDKRTGRLLRLPFIEKVLRQPFFTTELISRLVRDCEATMEAIF 180
           +NYS +NYTGLAKILKKYDKRT   LR PFI+KVL QPFF T+L+SRLVR+ E TM+A+ 
Sbjct: 111 VNYSNINYTGLAKILKKYDKRTRGGLRSPFIQKVLHQPFFKTDLVSRLVREWETTMDAVD 170

Query: 181 TSSVATTAMAGDRRTWKGCSGDAGMAPMADQQGIFRNTVAALATMKELRSGSSTYGRFSL 240
              VA           +G    A +   A  +GIFRNTVAAL TMKE+R GSSTY  FSL
Sbjct: 171 PVKVAEA---------EGYERCAAVTSAAAGEGIFRNTVAALLTMKEMRRGSSTYSAFSL 221

Query: 241 PPMAAPASPESDVLQSIRSDPHLKENGRIP 270
           PP+    S   +VL+S+    HL     IP
Sbjct: 222 PPLN--ISDSDNVLRSL----HLSSPIPIP 245



>AT2G26660.1 | chr2:11338932-11340703 FORWARD LENGTH=288
          Length = 287

 Score =  204 bits (519), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 113/275 (41%), Positives = 158/275 (57%), Gaps = 38/275 (13%)

Query: 1   MKFGKRLKKQVEESLPEWRDKFLAYX------------------XXXXXXXXXXXXXXXX 42
           MKFGK L  Q+EE+LPEWRDKFL+Y                                   
Sbjct: 1   MKFGKSLSNQIEETLPEWRDKFLSYKELKKKLKLMEPRSVENRPNKRSRSDSNSVDTDPT 60

Query: 43  XXXXXXEAEFVRLLDGEVDRINAFFLEQEEEFVIRQRELQETVEKVXXXXXXXXXXXXXX 102
                 E +F+ LL+ E+++ N+FF+EQEEE++IR +EL++ V K               
Sbjct: 61  VGMTKEELDFISLLEDELEKFNSFFVEQEEEYIIRLKELKDQVAKAKNSNEEMIN----- 115

Query: 103 XXXVRKEIVDLHGEMVLLLNYSAVNYTGLAKILKKYDKRTGRLLRLPFIEKVLRQPFFTT 162
              ++KEIVD HGEMVLL+NYSA+NYTGLAKILKKYDKRTG L+RLPFI+KVL++PFFTT
Sbjct: 116 ---IKKEIVDFHGEMVLLMNYSALNYTGLAKILKKYDKRTGALIRLPFIQKVLQEPFFTT 172

Query: 163 ELISRLVRDCEATMEAIFTSSVATTAMAGDRRTWKGC----SGDAGMAPMADQQG----- 213
           +L++  V++CEA ++ +F S+ +         T  G     + D+ +  +  +       
Sbjct: 173 DLLNTFVKECEAMLDRLFPSNKSRNLDEEGEPTTSGMVKTGTDDSELLRVPKELSEIEYM 232

Query: 214 ---IFRNTVAALATMKELRSGSSTYGRFSLPPMAA 245
                ++TV+AL  +KE+RSGSST   FSLPP+ A
Sbjct: 233 ESLYMKSTVSALKVLKEIRSGSSTVSVFSLPPLPA 267



>AT5G20150.1 | chr5:6802429-6803367 FORWARD LENGTH=257
          Length = 256

 Score =  194 bits (492), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 105/254 (41%), Positives = 148/254 (58%), Gaps = 29/254 (11%)

Query: 1   MKFGKRLKKQVEESLPEWRDKFLAYXXXXXXXXXXXXXXXX-----------XXXXXXXE 49
           MKFGK L  Q+E++LPEW+DKFL+Y                                  E
Sbjct: 1   MKFGKSLSNQIEQTLPEWQDKFLSYKELKKRLKLIGSKTADRPVKRLRLDEFSVGISKEE 60

Query: 50  AEFVRLLDGEVDRINAFFLEQEEEFVIRQRELQETVEKVXXXXXXXXXXXXXXXXXVRKE 109
             F++LL+ E+++ N FF+E+EEE++IR +E ++ + K                  +RKE
Sbjct: 61  INFIQLLEDELEKFNNFFVEKEEEYIIRLKEFRDRIAKAKDSMEKMIK--------IRKE 112

Query: 110 IVDLHGEMVLLLNYSAVNYTGLAKILKKYDKRTGRLLRLPFIEKVLRQPFFTTELISRLV 169
           IVD HGEMVLL NYSA+NYTGL KILKKYDKRTG L+RLPFI+KVL+QPF+TT+L+ +LV
Sbjct: 113 IVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGDLMRLPFIQKVLQQPFYTTDLLFKLV 172

Query: 170 RDCEATMEAIFTSSVATTAMAGDRRTWKGCSGDAGMAPMADQQGIFRNTVAALATMKELR 229
           ++ EA ++ IF ++   + +     +         M          ++T+AAL  +KE+R
Sbjct: 173 KESEAMLDQIFPANETESEIIQAELSEHKFMESLHM----------KSTIAALRVLKEIR 222

Query: 230 SGSSTYGRFSLPPM 243
           SGSST   FSLPP+
Sbjct: 223 SGSSTVSVFSLPPL 236



>AT5G15330.1 | chr5:4980595-4982043 FORWARD LENGTH=319
          Length = 318

 Score =  164 bits (414), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 142/283 (50%), Gaps = 43/283 (15%)

Query: 1   MKFGKRLKKQVEESLPEWRD---------KFLAYXXXXXXXXXXXXXXXXXXX------- 44
           MKFGK  +  +EE+LPEWRD         K L Y                          
Sbjct: 1   MKFGKEFRTHLEETLPEWRDKFLCYKPLKKLLKYYPYYSADFGPANSDHNDSRPVFADTT 60

Query: 45  -----------------XXXXEAEFVRLLDGEVDRINAFFLEQEEEFVIRQRELQETVEK 87
                                +  FVR+L+ E+++ N F++++EE+FVIR +EL+E +E+
Sbjct: 61  NISSAADDGGVVPGVRPSEDLQGSFVRILNDELEKFNDFYVDKEEDFVIRLQELKERIEQ 120

Query: 88  VXXXXXXXXXXX--XXXXXXVRKEIVDLHGEMVLLLNYSAVNYTGLAKILKKYDKRTGRL 145
           V                   +R+++V +HGEMVLL NYS++N+ GL KILKKYDKRTG L
Sbjct: 121 VKEKNGEFASESEFSEEMMDIRRDLVTIHGEMVLLKNYSSLNFAGLVKILKKYDKRTGGL 180

Query: 146 LRLPFIEKVLRQPFFTTELISRLVRDCEATMEAIF--------TSSVATTAMAGDRRTWK 197
           LRLPF + VL QPFFTTE ++RLVR+CEA +E +F        +SS      +  +    
Sbjct: 181 LRLPFTQLVLHQPFFTTEPLTRLVRECEANLELLFPSEAEVVESSSAVQAHSSSHQHNSP 240

Query: 198 GCSGDAGMAPMADQQGIFRNTVAALATMKELRSGSSTYGRFSL 240
             S +       +   I+++T+AA+  ++ L+  SSTY   S 
Sbjct: 241 RISAETSSTLGNENLDIYKSTLAAMRAIRGLQKASSTYNPLSF 283



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.135    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,792,390
Number of extensions: 156660
Number of successful extensions: 453
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 447
Number of HSP's successfully gapped: 4
Length of query: 277
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 180
Effective length of database: 8,447,217
Effective search space: 1520499060
Effective search space used: 1520499060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)