BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0382300 Os10g0382300|AK069060
         (700 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66810.1  | chr5:26672926-26676450 FORWARD LENGTH=751          368   e-102
AT1G61150.1  | chr1:22542928-22544355 FORWARD LENGTH=244           53   7e-07

>AT5G66810.1 | chr5:26672926-26676450 FORWARD LENGTH=751
          Length = 750

 Score =  368 bits (944), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 181/318 (56%), Positives = 220/318 (69%), Gaps = 7/318 (2%)

Query: 22  VNWDALDALVLDFARSDRLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRSRLLI 81
           VNW+ALDAL++DF  S+ L+                                 Y SRL+I
Sbjct: 62  VNWEALDALIIDFVSSENLV----EDAAAAVNSPPSPLSSPSSSSSPSISSSSYHSRLII 117

Query: 82  RRARTALEEGDVXXXXXXXXXXXXXXXXXXXXXFHLHKQRFVELVRRGTEADREAALDCL 141
           RR R+++E GD+                     F L KQ+F+EL+R+GT    EAA+DCL
Sbjct: 118 RRIRSSIESGDIETAIDILRSHAPFVLDDHRILFRLQKQKFIELLRKGTH---EAAIDCL 174

Query: 142 RTALAPCALDAYPEAYEEFKHILLVLIYDKDDQSSPVANEWSIKKRFELAGLLSSILRTH 201
           RT +APCALDAYPEAYEEFKH+LL LIYDKDDQ+SPVANEW+ K+R+E+AGL+SS+LR  
Sbjct: 175 RTCVAPCALDAYPEAYEEFKHVLLALIYDKDDQTSPVANEWAEKRRYEMAGLMSSVLRAS 234

Query: 202 LQAYDPILSMTLRYLISIHKLLCSRQGISSPISNLTERLLFDDRDPPAVPQECSLEAPPF 261
           LQAYDP+ SMTLRYLISIHK  C  QGISS +S+LT RLL ++RD PA P E   E PPF
Sbjct: 235 LQAYDPVFSMTLRYLISIHKGFCFHQGISSAVSDLTHRLLLEERDAPATPIESMYEVPPF 294

Query: 262 DEVDVQALAHAVELTRQGAVDSLKFAKGDLFQAFQNELCRMKLDLPLLDKLIHEYCIYRG 321
           DEVD+QALAHAVELTRQGAVDS+KFAKGDLFQAFQNELCRM+LD+ +LD+L+ EYCIYRG
Sbjct: 295 DEVDIQALAHAVELTRQGAVDSMKFAKGDLFQAFQNELCRMRLDVSVLDELVKEYCIYRG 354

Query: 322 IVEGGSHVLPGLQSNNQS 339
           IV+    ++      NQS
Sbjct: 355 IVDSEMQMITIPAKRNQS 372




 Score =  243 bits (621), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/258 (55%), Positives = 181/258 (70%), Gaps = 14/258 (5%)

Query: 453 DQKYEVILEMRDLTRKGMASKVVEEINNMDPDFFLKNPILLFQLKQVEFLKLVASGDHGA 512
           + KYE+ L +++L  +GMA++   EI+ MDPDFF +NP LLF LKQVEFLKLV++GDH  
Sbjct: 495 EDKYEIALALKELVSRGMAAEAFSEISTMDPDFFTQNPGLLFHLKQVEFLKLVSAGDHNG 554

Query: 513 ALKVASTHLGPLAASNQALLKPLKETLVTLIQPCEDVLTKSVSLPVLASSLQIAMSRRLG 572
           ALKVA  HLGPLAA++Q+LLK LKETL+ L+QP      K + L  LA++LQ+++  RLG
Sbjct: 555 ALKVACFHLGPLAANDQSLLKTLKETLLVLLQPDGTAPGKDLPLNDLANTLQVSVGNRLG 614

Query: 573 IEEPQLMKIIRTTLHTHSEWFKLQMCKDRFEHFLKIDSLKEVDPSAGSHNMSKVLTDECA 632
           IEEP+LMKII+ TLHTH+EWFKLQMCKDRF + LKIDSLKEV+        SK   D   
Sbjct: 615 IEEPKLMKIIKATLHTHTEWFKLQMCKDRFNNLLKIDSLKEVNTDLIGAIKSKSKKDSNT 674

Query: 633 N--GSSQITTCSSGKVLDEGSS---------PQESSEVTCDENAILKVMEFLALPRADAI 681
           N       T+ S+    D GSS         P+E+     +E+AILKVMEFLA+PR+DAI
Sbjct: 675 NLSSQVTTTSSSTMTSEDGGSSSLMMMTQTLPREA---LWEESAILKVMEFLAMPRSDAI 731

Query: 682 QLLMQYGGNAEEVIQQIF 699
           QLL QY G+AE VIQQ+F
Sbjct: 732 QLLSQYNGDAEAVIQQLF 749



>AT1G61150.1 | chr1:22542928-22544355 FORWARD LENGTH=244
          Length = 243

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%)

Query: 462 MRDLTRKGMASKVVEEINNMDPDFFLKNPILLFQLKQVEFLKLVASGDHGAALKVASTHL 521
           ++   + G     +E++N+++P+    NP L F L+Q   ++L+  G    AL+ A   L
Sbjct: 85  VKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEEL 144

Query: 522 GPLAASNQALLKPLKETLVTLI 543
            P    NQA L+ L++T+  L+
Sbjct: 145 APRGEENQAFLEELEKTVALLV 166



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,447,587
Number of extensions: 483232
Number of successful extensions: 1265
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1262
Number of HSP's successfully gapped: 3
Length of query: 700
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 594
Effective length of database: 8,200,473
Effective search space: 4871080962
Effective search space used: 4871080962
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)