BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0376900 Os10g0376900|AK058809
(328 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G72210.1 | chr1:27180066-27182268 FORWARD LENGTH=321 188 3e-48
AT1G22490.1 | chr1:7938448-7940489 REVERSE LENGTH=305 175 3e-44
AT4G01460.1 | chr4:621334-622697 FORWARD LENGTH=316 166 2e-41
AT5G46690.1 | chr5:18945639-18947434 FORWARD LENGTH=328 146 1e-35
AT3G24140.1 | chr3:8715525-8717772 REVERSE LENGTH=415 135 3e-32
AT3G61950.1 | chr3:22939661-22941332 FORWARD LENGTH=359 135 3e-32
AT2G46810.1 | chr2:19239694-19242373 FORWARD LENGTH=372 135 4e-32
AT5G53210.1 | chr5:21586606-21588941 REVERSE LENGTH=365 98 7e-21
AT3G06120.1 | chr3:1846531-1848016 FORWARD LENGTH=203 94 9e-20
AT5G65320.1 | chr5:26107368-26108640 REVERSE LENGTH=297 62 3e-10
AT1G01260.1 | chr1:109595-111367 FORWARD LENGTH=591 49 5e-06
>AT1G72210.1 | chr1:27180066-27182268 FORWARD LENGTH=321
Length = 320
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 138/222 (62%), Gaps = 18/222 (8%)
Query: 102 NREEIESQRMTHIAVERNRRRQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINYVRELEQ 161
N+EEIE+QRMTHIAVERNRR+QMNEYLAVLRSLMPP YAQRGDQASIVGGAINY++ELE
Sbjct: 116 NKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEH 175
Query: 162 LLQTLEAR-RTIKDHIDGGAGEXXXXXXXXXXXXQYSTATSGHGGGGDAHSRIVVKPXXX 220
LQ++E +T + D GAG S ++SG A + +P
Sbjct: 176 HLQSMEPPVKTATE--DTGAGHDQTKTT--------SASSSGPFSDFFAFPQYSNRP--- 222
Query: 221 XXXXXXXXXXXXXXXXXXSMVEGHASVKVQARRRPRQLLKLVAXXXXXXXXXXXXNVTTV 280
+MVE HAS+K+ A++RPRQLLKLV+ NVTT
Sbjct: 223 ----TSAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTR 278
Query: 281 AAMAMYSFSLKVEDGCKLGSVEEIATAVHEILERMQEEQAFA 322
+YS S+KVE+G +L +VE+IA AV++IL R++EE +F+
Sbjct: 279 DDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRIEEESSFS 320
>AT1G22490.1 | chr1:7938448-7940489 REVERSE LENGTH=305
Length = 304
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 131/217 (60%), Gaps = 19/217 (8%)
Query: 102 NREEIESQRMTHIAVERNRRRQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINYVRELEQ 161
N+EEIE+QRMTHIAVERNRR+QMNEYLAVLRSLMP SYAQRGDQASIVGGAINYV+ELE
Sbjct: 106 NKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEH 165
Query: 162 LLQTLEARRTIKDHIDGGAGEXXXXXXXXXXXXQYSTATSGHGGGGDAHSRIVVKPXXXX 221
+LQ++E +RT + H G ++ +S G D S
Sbjct: 166 ILQSMEPKRT-RTHDPKGDK---------------TSTSSLVGPFTDFFS---FPQYSTK 206
Query: 222 XXXXXXXXXXXXXXXXXSMVEGHASVKVQARRRPRQLLKLVAXXXXXXXXXXXXNVTTVA 281
++ E HA++K+ +++PRQLLKL+ NVTT+
Sbjct: 207 SSSDVPESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLH 266
Query: 282 AMAMYSFSLKVEDGCKLGSVEEIATAVHEILERMQEE 318
+YS S++VE+G +L +V++IATA+++ + R+QEE
Sbjct: 267 NSILYSISVRVEEGSQLNTVDDIATALNQTIRRIQEE 303
>AT4G01460.1 | chr4:621334-622697 FORWARD LENGTH=316
Length = 315
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 125/226 (55%), Gaps = 34/226 (15%)
Query: 102 NREEIESQRMTHIAVERNRRRQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINYVRELEQ 161
N++E+E+QRMTHIAVERNRRRQMNE+L LRSLMPPS+ QRGDQASIVGGAI++++ELEQ
Sbjct: 106 NKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQ 165
Query: 162 LLQTLEARRTIKDHIDGGAGEXXXXXXXXXXXXQYS---------TATSGHGGGGDAHSR 212
LLQ+LEA + KD D S + GGGD
Sbjct: 166 LLQSLEAEKR-KDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDT--- 221
Query: 213 IVVKPXXXXXXXXXXXXXXXXXXXXXSMVEGHASVKVQARRRPRQLLKLVAXXXXXXXXX 272
++++ H S+KV+ +R RQ+LK +
Sbjct: 222 ---------------------TEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAI 260
Query: 273 XXXNVTTVAAMAMYSFSLKVEDGCKLGSVEEIATAVHEILERMQEE 318
+++ +YSF+LK+EDGCKLGS +EIATAVH+I E++ E
Sbjct: 261 LHLTISSSFDFVIYSFNLKMEDGCKLGSADEIATAVHQIFEQINGE 306
>AT5G46690.1 | chr5:18945639-18947434 FORWARD LENGTH=328
Length = 327
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 131/248 (52%), Gaps = 35/248 (14%)
Query: 102 NREEIESQRMTHIAVERNRRRQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINYVRELEQ 161
N EE E+QRMTHIAVERNRRRQMN++L+VLRSLMP +A +GDQASIVGGAI++++ELE
Sbjct: 79 NEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEH 138
Query: 162 LLQTLEARRTIKDHIDGGAGEXXXXXXXXXXXXQYSTATSGHGGGGDAH-------SRIV 214
L +LEA++ H + + ST+ +G + H S+
Sbjct: 139 KLLSLEAQK----HHNAKLNQSVTS----------STSQDSNGEQENPHQPSSLSLSQFF 184
Query: 215 V---KPXXXXXXXXXXXXXXXXXXXXXSMVEGHASVKVQARRR-----------PRQLLK 260
+ P +++E HA++++ +RRR P QL K
Sbjct: 185 LHSYDPSQENRNGSTSSVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSK 244
Query: 261 LVAXXXXXXXXXXXXNVTTVAAMAMYSFSLKVEDGCKLGSVEEIATAVHEILERMQEEQA 320
LVA +VTT+ A+YS S KVE+ C+L SV++IA AVH +L ++EE
Sbjct: 245 LVASLQSLSLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEEPF 304
Query: 321 FADAKTSL 328
+ + L
Sbjct: 305 CCSSMSEL 312
>AT3G24140.1 | chr3:8715525-8717772 REVERSE LENGTH=415
Length = 414
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 114/221 (51%), Gaps = 29/221 (13%)
Query: 104 EEIESQRMTHIAVERNRRRQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINYVRELEQLL 163
EE+ESQRMTHIAVERNRR+QMNE+L VLRSLMP SY QRGDQASI+GGAI +VRELEQLL
Sbjct: 190 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLL 249
Query: 164 QTLEARRTIKDHIDGGAGEXXXXXXXXXXXXQYSTA------------TSGHGGGGDAHS 211
Q LE+++ + I G G + A T GGGG
Sbjct: 250 QCLESQK--RRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGG---- 303
Query: 212 RIVVKPXXXXXXXXXXXXXXXXXXXXXSMVEGHASVKVQARRRPRQLLKLVAXXXXXXXX 271
++ A +K+ +RRRP QL+K +A
Sbjct: 304 ----------LREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLS 353
Query: 272 XXXXNVTTVAAMAMYSFSLKVEDGCKLGSVEEIATAVHEIL 312
N+TT+ +YSF++K+ + + E+IA+++ +I
Sbjct: 354 ILHTNITTMEQTVLYSFNVKITSETRF-TAEDIASSIQQIF 393
>AT3G61950.1 | chr3:22939661-22941332 FORWARD LENGTH=359
Length = 358
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 114/213 (53%), Gaps = 28/213 (13%)
Query: 102 NREEIESQRMTHIAVERNRRRQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINYVRELEQ 161
N EEIE+QR+ HIAVERNRRRQMNE++ LR+L+PPSY QRGDQASIVGGAINYV+ LEQ
Sbjct: 169 NNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQ 228
Query: 162 LLQTLEARRTIKDHIDGGAGEXXXXXXXXXXXXQYSTATSGHGGGGDAHSRIVVKPXXXX 221
++Q+LE+++ + + E + + S + + +
Sbjct: 229 IIQSLESQKRTQQQSNSEVVE---------NALNHLSGISSNDLWTTLEDQTCIP----- 274
Query: 222 XXXXXXXXXXXXXXXXXSMVEGHASVKVQARRRPRQLLKLVAXXXXXXXXXXXXNVTT-V 280
++++ H S+KVQ ++ QLLK + N+TT
Sbjct: 275 -------------KIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSS 321
Query: 281 AAMAMYSFSLKVEDGCKLGSVEEIATAVHEILE 313
+ YSF+LK+ED C L S +EI AVH I +
Sbjct: 322 HSSVSYSFNLKMEDECDLESADEITAAVHRIFD 354
>AT2G46810.1 | chr2:19239694-19242373 FORWARD LENGTH=372
Length = 371
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 115/213 (53%), Gaps = 27/213 (12%)
Query: 102 NREEIESQRMTHIAVERNRRRQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINYVRELEQ 161
N EEIESQRMTHIAVERNRRRQMN +L LRS++P SY QRGDQASIVGGAI++V+ LEQ
Sbjct: 184 NIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQ 243
Query: 162 LLQTLEARRTIKDHIDGGAGEXXXXXXXXXXXXQYSTATSGHGGGGDAHSRIVVKPXXXX 221
LQ+LEA++ + D S+ + S++ ++
Sbjct: 244 QLQSLEAQKRSQQSDDNKE-----QIPEDNSLRNISSNKLRASNKEEQSSKLKIE----- 293
Query: 222 XXXXXXXXXXXXXXXXXSMVEGHASVKVQARRRPRQLLKLVAXXXXXXXXXXXXNVTTVA 281
+++E H ++K+Q R+ QLL+ + N+T+
Sbjct: 294 ----------------ATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPT 337
Query: 282 AMAM-YSFSLKVEDGCKLGSVEEIATAVHEILE 313
++ YSF+LK+ED C LGS +EI A+ +I +
Sbjct: 338 NTSVSYSFNLKMEDECNLGSADEITAAIRQIFD 370
>AT5G53210.1 | chr5:21586606-21588941 REVERSE LENGTH=365
Length = 364
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%)
Query: 109 QRMTHIAVERNRRRQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINYVRELEQLLQTLEA 168
Q+M+H+ VERNRR+QMNE+L VLRSLMP Y +RGDQASI+GG + Y+ EL+Q+LQ+LEA
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159
Query: 169 RRTIKDH 175
++ K +
Sbjct: 160 KKQRKTY 166
>AT3G06120.1 | chr3:1846531-1848016 FORWARD LENGTH=203
Length = 202
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 111 MTHIAVERNRRRQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINYVRELEQLLQTLEARR 170
M+HIAVERNRRRQMNE+L LRSL P Y +RGDQASI+GG I +++EL+QL+Q LE+++
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 171 TIKDHIDGGAGEXXXXXXXXXXXXQYSTATSGHGGGGDAHSRIVVKPXXXXXXXXXXXXX 230
K Y T G A +R+
Sbjct: 61 RRKT--------------LNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEV 106
Query: 231 XXXXXXXXSMVEGHAS-----VKVQARRRPRQLLKLVAXXXXXXXXXXXXNVTTVAAMAM 285
+ VE S ++V +RR QL+K+++ N++++ +
Sbjct: 107 GACCNSPHANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVL 166
Query: 286 YSFSLKVEDGCKLGSVEEIATAVHE 310
Y F +K+ C L S+EE+ V +
Sbjct: 167 YFFVVKIGLECHL-SLEELTLEVQK 190
>AT5G65320.1 | chr5:26107368-26108640 REVERSE LENGTH=297
Length = 296
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 239 SMVEGHASVKVQARRRPRQLLKLVAXXXXXXXXXXXXNVTTVAAMAMYSFSLKVEDGCKL 298
+MVE HA++KV + +PR L K++ N+TT M++++FS+KVE C+L
Sbjct: 215 TMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVEADCQL 274
Query: 299 G-SVEEIATAVHEILERMQEEQ 319
S E+A VHE++ R+ +E+
Sbjct: 275 TPSGNEVANTVHEVVRRVHKER 296
>AT1G01260.1 | chr1:109595-111367 FORWARD LENGTH=591
Length = 590
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 111 MTHIAVERNRRRQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINYVRELEQLLQTLEARR 170
+ H+ ER RR ++N+ LRS++P + D+AS++G A++Y+ EL L+ +EA R
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVP--NISKMDKASLLGDAVSYINELHAKLKVMEAER 489
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.128 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,323,103
Number of extensions: 119019
Number of successful extensions: 349
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 389
Number of HSP's successfully gapped: 17
Length of query: 328
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 229
Effective length of database: 8,392,385
Effective search space: 1921856165
Effective search space used: 1921856165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 112 (47.8 bits)