BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0363700 Os10g0363700|J090026E10
         (111 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22060.1  | chr1:7773373-7780586 REVERSE LENGTH=2000           173   1e-44
AT5G52280.1  | chr5:21226959-21230109 FORWARD LENGTH=854           84   1e-17
AT5G41140.1  | chr5:16468726-16472546 FORWARD LENGTH=984           83   2e-17
AT1G63300.1  | chr1:23482193-23486067 FORWARD LENGTH=1030          83   4e-17

>AT1G22060.1 | chr1:7773373-7780586 REVERSE LENGTH=2000
          Length = 1999

 Score =  173 bits (439), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/109 (71%), Positives = 93/109 (85%)

Query: 1   IPSTGWDKLFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKL 60
           +P  GWDKLF+SFI AD+ K +AKT KA VRNG+CKW DPIYE TRLLQD+RTK +D+KL
Sbjct: 27  VPQAGWDKLFISFIPADSVKATAKTTKALVRNGTCKWGDPIYETTRLLQDTRTKQFDEKL 86

Query: 61  YKIVVAMGTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHV 109
           YKIVVAMGTSRSSILGE  +NLAE+A+ALKP ++ LPL+GC+ G ILHV
Sbjct: 87  YKIVVAMGTSRSSILGEAMINLAEYADALKPFAVILPLQGCDPGAILHV 135



>AT5G52280.1 | chr5:21226959-21230109 FORWARD LENGTH=854
          Length = 853

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/109 (33%), Positives = 64/109 (58%)

Query: 1   IPSTGWDKLFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKL 60
           +P      L +S +  D GK + K  K+ V+ G C W +PIY + +L+++ +T    +K+
Sbjct: 25  VPKLKKTALMISLVPDDVGKPTFKLEKSEVKEGICSWENPIYVSVKLIKEPKTGIVREKI 84

Query: 61  YKIVVAMGTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHV 109
           Y  VVA G+S+S  LGE  ++ A+F     P++++LPL+    G +L+V
Sbjct: 85  YHFVVATGSSKSGFLGEASIDFADFLTEADPLTVSLPLKFANSGAVLNV 133



>AT5G41140.1 | chr5:16468726-16472546 FORWARD LENGTH=984
          Length = 983

 Score = 83.2 bits (204), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/102 (33%), Positives = 64/102 (62%), Gaps = 1/102 (0%)

Query: 9   LFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKLYKIVVA-M 67
           L +S +  D GK + K  KA V +G C+W  P+YE  + LQD +T   + ++Y +V++  
Sbjct: 36  LTISVVPGDVGKSTGKAEKAMVLDGHCRWESPVYETVKFLQDVKTGKVNQRIYHLVMSTT 95

Query: 68  GTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHV 109
           G+++S ++GE  ++ A++ +A+K  +++LPL+      +LHV
Sbjct: 96  GSTKSGVVGETSIDFADYVDAIKTCNVSLPLQNSNSKAMLHV 137



>AT1G63300.1 | chr1:23482193-23486067 FORWARD LENGTH=1030
          Length = 1029

 Score = 82.8 bits (203), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/102 (33%), Positives = 64/102 (62%), Gaps = 1/102 (0%)

Query: 9   LFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKLYKIVVA-M 67
           L LS +  D GK +A++ KA V +G C+W  P+YE  + L+D +T   + ++Y ++V+  
Sbjct: 35  LILSLVPGDIGKPTARSEKAIVNDGHCRWEIPVYETVKFLKDVKTGKVNQRIYHLIVSTT 94

Query: 68  GTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHV 109
           G++R  ++GE  ++ A++ +A K  +++LPL+      +LHV
Sbjct: 95  GSARGGLVGETSIDFADYVDATKTCNVSLPLQNSSSKALLHV 136



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,269,334
Number of extensions: 76975
Number of successful extensions: 176
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 174
Number of HSP's successfully gapped: 4
Length of query: 111
Length of database: 11,106,569
Length adjustment: 80
Effective length of query: 31
Effective length of database: 8,913,289
Effective search space: 276311959
Effective search space used: 276311959
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 104 (44.7 bits)