BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0197200 Os10g0197200|Os10g0197200
         (946 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1  | chr3:14321838-14323928 FORWARD LENGTH=697          232   7e-61
AT1G18560.1  | chr1:6385614-6388005 FORWARD LENGTH=691            138   2e-32

>AT3G42170.1 | chr3:14321838-14323928 FORWARD LENGTH=697
          Length = 696

 Score =  232 bits (591), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 181/657 (27%), Positives = 289/657 (43%), Gaps = 84/657 (12%)

Query: 292 EVEPVAKRQKKCTSKVWDYFIKYTDKAKNKVTGVEEQQRKAKCKKCGRVFG---AETVNG 348
           E +P+ +R+KK  S VW++F          +  VE   R+A CK C + F       V G
Sbjct: 57  ETQPIKRRKKK--SMVWEHFT---------IEAVEPNCRRAFCKGCNQSFAYSNGNKVAG 105

Query: 349 TKHLWNHLNR------IHSLKQGQQELQV-----KGEVQTFRY------DPEVSLE---- 387
           T HL  H+ +      IH+       L       K +    RY       P V+      
Sbjct: 106 TSHLKRHIFKGTCPALIHTHDNDNNPLMSTPYTPKTDTPRRRYRSQNNASPYVAFNQDKC 165

Query: 388 KWYIA--VIMHEYPFSMVDHVYFNEFIHSLRPSFEFKCRIITSKAILEIFEVRKRILYDE 445
           +  IA  +IMH+YP  MV H  F  F+ S++P F+           +  +   K+ +   
Sbjct: 166 RQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVSFNNVQGDCVATYLAEKQNVMKS 225

Query: 446 LKSVSSRISTTMDMWTSNQNKAYMCITAHWIDENWLMQKRILKFIHIDGKHTGTRLANAF 505
           L+ +  R   T+D WTS     Y+ ITAH+ID +W +QK++L  +          L+ A 
Sbjct: 226 LEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAV 285

Query: 506 VKGVMSMNIEKKLFALTLDNASSNDKCAREVVIELNKLFNISKVPPLMCDGAFFHVRCLC 565
              V    +E KLF +T ++ +SN       V  +     I    P + DG      C+ 
Sbjct: 286 ANCVSEWGLEGKLFNVTFNHPASN-----SAVENIRPQLCIKN--PGILDGQLVIGNCVA 338

Query: 566 HILNLVAQDGLKIIAHTIQNIRTTIGIVKNSTLQWEEFQKCAVECDLNNNSGLPLDVPTR 625
                +A+D L+     I+NIR ++  VK S    E F +   +  + +   L LD  T+
Sbjct: 339 RTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFTELKEQLQVPSEKVLSLDDQTQ 398

Query: 626 WNSTYDMLKQAIYYRGAFERLLFLDEDRYQRCASSAEEWGMAESLCNCLEKFNDATLLFS 685
           WN+TY ML  A   +  F  L   D D Y++   SAE+W   E+LC  L+   +A     
Sbjct: 399 WNTTYMMLVAASELKEVFSCLDTADPD-YKK-PPSAEDWRHVEALCTFLKPLFEAVSTLQ 456

Query: 686 GCLYPTANLFWWKFCEIKLALREWCASADVSIASMAVAMQLKYDKYWDKSNLALA----- 740
               P+A  F+ +  + +  L    A  D  +  +A  MQ K DKYW   +L LA     
Sbjct: 457 STGNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVM 516

Query: 741 --------------KIYPDKYEEEFKRVLAAIDKFFRAYKSCVARSSKPTAAGSSENSQP 786
                         KI+ +   +  K V   I + F  Y           A  S +N+  
Sbjct: 517 DPRFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHELFTEY----------MALPSPQNTTS 566

Query: 787 HGNTSLGHNEIEKFLYDDAAANKEDDINELDVYMKEKPIRWVDPTGEGVEFDILAWWKNN 846
            G  + G ++ + ++ +    N +   +ELD Y+ E  +  V       EFD+L WWK N
Sbjct: 567 EGGKADGLSDFDTYIMETTGQNLK---SELDQYLDETLLPRVQ------EFDVLDWWKQN 617

Query: 847 QMTFPILSTLARDVMAVQISTVASESAFSAGGRVVGPFRSSLHPEMIEALVCTKDWI 903
           ++ +P LS +ARD++++ +S  A +  F    R +  +++SL PE +EAL+C ++W+
Sbjct: 618 KLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674



>AT1G18560.1 | chr1:6385614-6388005 FORWARD LENGTH=691
          Length = 690

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 154/646 (23%), Positives = 261/646 (40%), Gaps = 66/646 (10%)

Query: 298 KRQKKCTSKVWDYFIKYTDKAKNKVTGVEEQQRKAKCKKCGRVFGAETVNGT--KHLWNH 355
           KR+K  TS     ++KY + A +  T         KCK CG+ +   T  G   +HL N 
Sbjct: 48  KRKKTMTS----VYLKYFETAPDSKT--------RKCKFCGQSYSIATATGNLGRHLTNR 95

Query: 356 --------LNRIHSLKQGQQELQVKGEVQTFRYDPEVSLE--KWYIA--VIMHEYPFSMV 403
                    + + S    Q    V    Q+    P++  +   W +   + +   P S V
Sbjct: 96  HPGYDKAAADVVTSSSVPQTPPAVVKPSQSQSKVPQLDYDHLNWLVLKWLALSSLPPSTV 155

Query: 404 DHVYFNEFIHSLRPSFEFKCRIITSKAIL-EIFEVRKRILYDELKSVSSRISTTMDMWTS 462
           D  +       L+PS +        KAIL E+F   +  +   L+ + S++S T+  W S
Sbjct: 156 DETWLGNSFKFLKPSIQL-WPAEKYKAILDEVFTSMRGDVKTTLEHIQSKVSVTLSFWNS 214

Query: 463 NQNKAYMCITAHWIDENWLMQKRILKFIHIDGKHTGTRLANAFVKGVMSMNIEKKLFALT 522
            +N  YM +T  WIDENW   + +L    I     G+ + N+ +K + +  IE ++   T
Sbjct: 215 YENIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKTYAIEDRILCCT 274

Query: 523 LDNASSNDKCAREVVIELNKLFNISKVPPLMCDGAFFHVRCLCHILNLVAQDGLKIIAHT 582
            DN+ +    A      L + F+  KV P      F ++ C    LN +  +GL  I   
Sbjct: 275 HDNSEN----AIHACHSLKEYFDGQKVLP------FCYIPCAAQTLNDIIDEGLATIKPI 324

Query: 583 IQNIRTTIGIVKNSTLQWEEFQKCAVECDLNNNSGLPLDVPTRWNSTYDMLKQAIYYRGA 642
           I  +R     +  ST   ++F +         N  LP+D  +RW+  Y M+        +
Sbjct: 325 ISKVREFTQELNASTELSDDFIQLTTAYQ-EGNWKLPIDASSRWSGNYQMVNILCKASKS 383

Query: 643 FERLLFLDEDRYQ-RCASSAEEWGMAESLCNCLE-----KFNDATLLFSGCLYPTANLFW 696
            + ++  +ED  + R   S+ E      + N L+     K  +            A LF 
Sbjct: 384 LDSVIRKNEDALENRMMLSSVEKNAVTIVHNYLDLDSFHKTTNDMCTNKDLTVGLALLFM 443

Query: 697 WKFCEIKLALREWCASAD------VSIASMAVAMQLKYDKYWDKSNLALAKIYPDKYEEE 750
               E+    ++ C + D       S+A  A +   +    +      L      +Y  E
Sbjct: 444 DNISEMITTCQKSCHNPDWLRTCAESMAQKARSYNTQVCNVFTYITAILDPRIKTEYIPE 503

Query: 751 FKRVLAAIDK----FFRAYKSCVARSSKPTAAGSSENSQPHGNTSLGHNEIEKFLYDDAA 806
              + + ID+    F R Y S    SS  +     E  +  GN S    EI +     + 
Sbjct: 504 TINLESYIDEARSHFIRNYSSSHFTSSMTSGYRPQEVDEGGGNISFAE-EIARRKRRGSM 562

Query: 807 ANKEDDINELDVYMKEKPIRWVDPTGEGVEFDILAWWKNNQMTFPILSTLARDVMAVQIS 866
           +N  + ++EL  Y+ E  +         ++ D+L WWK N   +P LS +ARD +AVQ +
Sbjct: 563 SN--NVVDELTQYLSESIV--------PMQTDVLDWWKVNSGRYPRLSNMARDFLAVQAT 612

Query: 867 TVASESAFSAGGRVVGPFRSSLHPEMIEALVCTKDWIRASRKGPFK 912
           + A E  F   G  +   +  +  +  ++++C + WI A  K  +K
Sbjct: 613 SAAPEEIFCGKGEEIDKQKYCMPHDSTQSVICIRSWIEAGMKLKYK 658



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.133    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,374,520
Number of extensions: 780086
Number of successful extensions: 1993
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1987
Number of HSP's successfully gapped: 3
Length of query: 946
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 838
Effective length of database: 8,145,641
Effective search space: 6826047158
Effective search space used: 6826047158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 116 (49.3 bits)