BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0158400 Os10g0158400|Os10g0158400
(398 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13930.1 | chr5:4488762-4490035 FORWARD LENGTH=396 378 e-105
AT4G34850.1 | chr4:16608349-16609720 FORWARD LENGTH=393 286 1e-77
AT4G00040.1 | chr4:14653-15897 FORWARD LENGTH=386 262 2e-70
AT1G02050.1 | chr1:359164-360441 REVERSE LENGTH=396 252 3e-67
AT4G34510.1 | chr4:16491796-16493259 FORWARD LENGTH=488 50 2e-06
AT1G19440.1 | chr1:6729119-6730669 FORWARD LENGTH=517 50 2e-06
>AT5G13930.1 | chr5:4488762-4490035 FORWARD LENGTH=396
Length = 395
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/395 (48%), Positives = 255/395 (64%), Gaps = 11/395 (2%)
Query: 1 MPGATTAAIVDSRRGTQHSEGPATILAIGTANPENIMFQDNFADYYFGLTKSEHLTELKE 60
M GA++ +D R Q ++GPA ILAIGTANPEN + Q + DYYF +T SEH+T+LKE
Sbjct: 3 MAGASS---LDEIRQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKE 59
Query: 61 KMKRICHKSGIEKRYIHLDAELISVHPEIIDKHLPSLETRVDIVATEVPKLAESAARKAI 120
K KR+C KS I KR++HL E + +P + PSL+TR DIV EVPKL + AA KAI
Sbjct: 60 KFKRMCDKSTIRKRHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAI 119
Query: 121 AEWGRPATDITHLIFSTYSGCRAPSADLQLASLLGLRPSVSRTILSLHGCSGGGRALQLA 180
EWG+P + ITH++F T SG P AD QL LLGLRPSV R ++ GC GG L++A
Sbjct: 120 KEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIA 179
Query: 181 KEIAENNRGARVLIACSELTLICFSTPDES---KIIGHGLFXXXXXXXXXXXXPSVD-GE 236
K++AENNRGARVL+ CSE+T + F P ++ ++G LF P GE
Sbjct: 180 KDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGE 239
Query: 237 CPLFEMVAASQTMIPGTEHALGMQATSSGIDFHLSIQVPTLIKDNIHQCLLNAFRSVGNT 296
P+FEMV+A+QT++P ++ A+ G+ FHL VP LI NI + L AF+ +G +
Sbjct: 240 KPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGIS 299
Query: 297 DPNWNDLFWAVHPGGRAILDNIEDKLQLHPCKLAASRQVLSEYGNMSGATIAFVLDELRR 356
D WN LFW HPGG AILD +E KL L K+ A+R VLSEYGNMS A + F+LDE+RR
Sbjct: 300 D--WNSLFWIAHPGGPAILDQVEIKLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRR 357
Query: 357 RREKE--QDIQQQPEWGVLLAFGPGVTIESIVLRN 389
+ K+ + EWGVL FGPG+T+E++VL +
Sbjct: 358 KSAKDGVATTGEGLEWGVLFGFGPGLTVETVVLHS 392
>AT4G34850.1 | chr4:16608349-16609720 FORWARD LENGTH=393
Length = 392
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/391 (39%), Positives = 229/391 (58%), Gaps = 7/391 (1%)
Query: 3 GATTAAIVDSRRGTQHSEGPATILAIGTANPENIMFQDNFADYYFGLTKSEHLTELKEKM 62
G+ AA++ S + + + G ATILA+G A P ++ Q+ D YF TK + ELK+K+
Sbjct: 2 GSIDAAVLGSEK--KSNPGKATILALGKAFPHQLVMQEYLVDGYFKTTKCDD-PELKQKL 58
Query: 63 KRICHKSGIEKRYIHLDAELISVHPEIIDKHLPSLETRVDIVATEVPKLAESAARKAIAE 122
R+C + ++ RY+ + E++ +PE+ + ++ R+DI V ++A A+R I
Sbjct: 59 TRLCKTTTVKTRYVVMSEEILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKN 118
Query: 123 WGRPATDITHLIFSTYSGCRAPSADLQLASLLGLRPSVSRTILSLHGCSGGGRALQLAKE 182
WGR +DITH+++ + S R P DL LA LGL P R +L GCSGG L++AK+
Sbjct: 119 WGRSISDITHVVYVSSSEARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKD 178
Query: 183 IAENNRGARVLIACSELTLICFSTPDESK---IIGHGLFXXXXXXXXXXXXPSVDGECPL 239
IAENN G+RVL+A SE T+I F P + ++G LF P E PL
Sbjct: 179 IAENNPGSRVLLATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPDPICEKPL 238
Query: 240 FEMVAASQTMIPGTEHALGMQATSSGIDFHLSIQVPTLIKDNIHQCLLNAFRSVGNTDPN 299
FE+ A Q +P TE + + T GI+F LS ++P +I+DN+ G N
Sbjct: 239 FELHTAIQNFLPETEKTIDGRLTEQGINFKLSRELPQIIEDNVENFCKKLIGKAGLAHKN 298
Query: 300 WNDLFWAVHPGGRAILDNIEDKLQLHPCKLAASRQVLSEYGNMSGATIAFVLDELRRRRE 359
+N +FWAVHPGG AIL+ IE +L L P KL+ SR+ L +YGN S +I +VL+ + +
Sbjct: 299 YNQMFWAVHPGGPAILNRIEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYMLEESK 358
Query: 360 KEQDI-QQQPEWGVLLAFGPGVTIESIVLRN 389
K +++ +++ EWG++LAFGPGVT E I+ RN
Sbjct: 359 KVRNMNEEENEWGLILAFGPGVTFEGIIARN 389
>AT4G00040.1 | chr4:14653-15897 FORWARD LENGTH=386
Length = 385
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 217/373 (58%), Gaps = 7/373 (1%)
Query: 20 EGPATILAIGTANPENIMFQDNFADYYFGLTKSEHLTELKEKMKRICHKSGIEKRYIHLD 79
+G AT+LA+G A P N++ Q+N + Y K ++L+ +K+K++ +C + ++ RY +
Sbjct: 16 QGKATVLALGKALPSNVVSQENLVEEYLREIKCDNLS-IKDKLQHLCKSTTVKTRYTVMS 74
Query: 80 AELISVHPEIIDKHLPSLETRVDIVATEVPKLAESAARKAIAEWGRPATDITHLIFSTYS 139
E + +PE+ + P+++ R++I V ++A A+ I EWGR DITHL++ + S
Sbjct: 75 RETLHKYPELATEGSPTIKQRLEIANDAVVQMAYEASLVCIKEWGRAVEDITHLVYVSSS 134
Query: 140 GCRAPSADLQLASLLGLRPSVSRTILSLHGCSGGGRALQLAKEIAENNRGARVLIACSEL 199
R P DL L++ LGL V R +L GC GG L++AK+IAENN G+RVL+ SE
Sbjct: 135 EFRLPGGDLYLSAQLGLSNEVQRVMLYFLGCYGGLSGLRVAKDIAENNPGSRVLLTTSET 194
Query: 200 TLICFSTPDESK---IIGHGLFXXXXXXXXXXXXPSVDGECPLFEMVAASQTMIPGTEHA 256
T++ F P++++ ++G LF P+ + E P E+ A Q +P T+
Sbjct: 195 TVLGFRPPNKARPYNLVGAALFGDGAAALIIGADPT-ESESPFMELHCAMQQFLPQTQGV 253
Query: 257 LGMQATSSGIDFHLSIQVPTLIKDNIHQCLLNAFRSVGNTDPNWNDLFWAVHPGGRAILD 316
+ + + GI F L +P I+DN+ + G+ NDLFWAVHPGG AIL
Sbjct: 254 IDGRLSEEGITFKLGRDLPQKIEDNVEEFCKKLVAKAGSGALELNDLFWAVHPGGPAILS 313
Query: 317 NIEDKLQLHPCKLAASRQVLSEYGNMSGATIAFVLDELRRRREKEQDIQQQPEWGVLLAF 376
+E KL+L P KL SR+ L +YGN+S TI +++D++R EK+ + EWG+ LAF
Sbjct: 314 GLETKLKLKPEKLECSRRALMDYGNVSSNTIFYIMDKVRDELEKKG--TEGEEWGLGLAF 371
Query: 377 GPGVTIESIVLRN 389
GPG+T E ++RN
Sbjct: 372 GPGITFEGFLMRN 384
>AT1G02050.1 | chr1:359164-360441 REVERSE LENGTH=396
Length = 395
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 223/372 (59%), Gaps = 7/372 (1%)
Query: 21 GPATILAIGTANPENIMFQDNFADYYFGLTKSEHLTELKEKMKRICHKSGIEKRYIHLDA 80
G AT+LA+G A P ++ Q+N + + TK + +KEK++ +C + ++ RY L
Sbjct: 24 GKATLLALGKAFPSQVVPQENLVEGFLRDTKCDD-AFIKEKLEHLCKTTTVKTRYTVLTR 82
Query: 81 ELISVHPEIIDKHLPSLETRVDIVATEVPKLAESAARKAIAEWGRPATDITHLIFSTYSG 140
E+++ +PE+ + P+++ R++I V ++A A+ I EWGRP DITH+++ + S
Sbjct: 83 EILAKYPELTTEGSPTIKQRLEIANEAVVEMALEASLGCIKEWGRPVEDITHIVYVSSSE 142
Query: 141 CRAPSADLQLASLLGLRPSVSRTILSLHGCSGGGRALQLAKEIAENNRGARVLIACSELT 200
R P DL L++ LGLR V+R +L GC GG L++AK+IAENN G+RVL+ SE T
Sbjct: 143 IRLPGGDLYLSAKLGLRNDVNRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
Query: 201 LICFSTPDESK---IIGHGLFXXXXXXXXXXXXPSVDGECPLFEMVAASQTMIPGTEHAL 257
++ F P++++ ++G LF P + E P E+ A Q +PGT++ +
Sbjct: 203 ILGFRPPNKARPYDLVGAALFGDGAAAVIIGADPR-ECEAPFMELHYAVQQFLPGTQNVI 261
Query: 258 GMQATSSGIDFHLSIQVPTLIKDNIHQCLLNAFRSVGNTDPNWNDLFWAVHPGGRAILDN 317
+ T GI+F L +P I++NI + G+ +ND+FWAVHPGG AIL+
Sbjct: 262 EGRLTEEGINFKLGRDLPQKIEENIEEFCKKLMGKAGDESMEFNDMFWAVHPGGPAILNR 321
Query: 318 IEDKLQLHPCKLAASRQVLSEYGNMSGATIAFVLDELRRRREKEQDIQQQPEWGVLLAFG 377
+E KL+L KL +SR+ L +YGN+S TI +V++ +R +K+ D Q EWG+ LAFG
Sbjct: 322 LETKLKLEKEKLESSRRALVDYGNVSSNTILYVMEYMRDELKKKGDAAQ--EWGLGLAFG 379
Query: 378 PGVTIESIVLRN 389
PG+T E +++R+
Sbjct: 380 PGITFEGLLIRS 391
>AT4G34510.1 | chr4:16491796-16493259 FORWARD LENGTH=488
Length = 487
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 305 WAVHPGGRAILDNIEDKLQLHPCKLAASRQVLSEYGNMSGATIAFVL--DELRRRREKEQ 362
+ +H GGRA++D +E L+L P + ASR L +GN S ++I + L E + R K
Sbjct: 383 FCIHAGGRAVIDELEKSLKLSPKHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGN 442
Query: 363 DIQQQPEWGVLLAFGPGVTIESIV---LRN 389
+ Q +AFG G S V LRN
Sbjct: 443 RVWQ-------IAFGSGFKCNSAVWVALRN 465
>AT1G19440.1 | chr1:6729119-6730669 FORWARD LENGTH=517
Length = 516
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 305 WAVHPGGRAILDNIEDKLQLHPCKLAASRQVLSEYGNMSGATIAFVLD--ELRRRREKEQ 362
+ +H GGRA++D +E LQL P + ASR L +GN S ++I + L E + R +
Sbjct: 412 FCIHAGGRAVIDELEKNLQLSPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRRGN 471
Query: 363 DIQQQPEWGVLLAFGPGVTIESIV 386
+ Q +AFG G S +
Sbjct: 472 RVWQ-------IAFGSGFKCNSAI 488
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,279,502
Number of extensions: 332226
Number of successful extensions: 856
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 845
Number of HSP's successfully gapped: 6
Length of query: 398
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 297
Effective length of database: 8,337,553
Effective search space: 2476253241
Effective search space used: 2476253241
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)