BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0147900 Os10g0147900|AK105620
(660 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34940.1 | chr4:16639760-16641754 FORWARD LENGTH=665 449 e-126
AT5G66200.1 | chr5:26453648-26455603 REVERSE LENGTH=652 448 e-126
AT4G36030.1 | chr4:17045084-17047096 REVERSE LENGTH=671 417 e-117
AT3G26600.1 | chr3:9769889-9771736 FORWARD LENGTH=616 189 4e-48
>AT4G34940.1 | chr4:16639760-16641754 FORWARD LENGTH=665
Length = 664
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 276/697 (39%), Positives = 374/697 (53%), Gaps = 73/697 (10%)
Query: 1 MGEGVKAMLARPIQLADEVAKQCGAARCFRAECGEXXXXXXXXX--XXXXXXXXXXXYDR 58
M + VK +L RPIQLAD++ K A FR EC E Y+R
Sbjct: 1 MADIVKQILVRPIQLADQITKASDEAYSFRQECLEVKAKTEKLAGLLRQAARASNDLYER 60
Query: 59 PAARIMXXXXXXXXXXXXXXXXXXXGHPRLRRLFTLSPAAGFPRTVALLDTALEDVAWLL 118
P RI+ ++R+FT+ PAA F + L+ ++ DV+WLL
Sbjct: 61 PTRRIIDDTEQVLFKALALVEKCR-ATGLMKRVFTIIPAAAFRKITMQLENSIGDVSWLL 119
Query: 119 RISSPRSXXXXXXXXXXXXXXXXXXXXXLRGLPNIAQNEPILFLIWDHVARLHTGGXXXX 178
R+S+ GLP IA NEPIL LIW+ VA L TG
Sbjct: 120 RVSASGDDRDDEYL----------------GLPPIAANEPILCLIWEQVAILFTGSLDDR 163
Query: 179 XXXXXXXXXXXXXXQHFAKLIIEEDGVPPLLRLLKEGTDDGQEAAARALGLLGCDDESID 238
+ +LIIEE GVP LL+L KEG +GQE AARA+GLLG D ES++
Sbjct: 164 SDAAASLVSLARDNDRYGRLIIEEGGVPSLLKLAKEGKMEGQENAARAIGLLGRDPESVE 223
Query: 239 KLVQAGVCSVFAAALKDPPMRVQAAVADAIGTLADRSATCQELFAQNNAVRYLVGHLASG 298
++V AGVC VFA LK+ M+VQ VA A+ LA CQ+ FAQNN +R+LV HLA
Sbjct: 224 QIVNAGVCQVFAKILKEGHMKVQTVVAWAVSELASNHPKCQDHFAQNNIIRFLVSHLAFE 283
Query: 299 TIQEHXXXXXXXXXXXXXXXXPQHMTSLHSVVLAKTLSMRHGGDRGTSSSTDEPPR---- 354
T+QEH Q ++S+H+VV+A S + D+ ++ DE
Sbjct: 284 TVQEHSKYAIVSNK--------QTLSSIHTVVMA---SNTNPADKKENNEQDETKSNISH 332
Query: 355 -VSNEQDTKRNQMQSVVQSAMAAKTK-------------TNGSLVPPFRPQLGT---SGS 397
+SN+ + QM S++ + +A K TN + + Q GS
Sbjct: 333 PLSNQTPS---QMHSLIANTLAMKGSGPSSGSGSGSGSGTNKNQIKQSNQQHQNHTKGGS 389
Query: 398 SGRGAV-------------REVEDPETXXXXXXXXXXXXXXXXXGHLGVCKSITDSRALL 444
+ RG RE EDP T G+L +C+SIT+SRALL
Sbjct: 390 NPRGNNPTHVSLMGTSIKGREYEDPATKAQMKAMAARALWQLSRGNLQICRSITESRALL 449
Query: 445 CFAVLLEKGDGGMGTSVQYFSAMAIMEISRVAEHSLALRQXXXXXXXXXXXXVVDQLLHI 504
CFAVLLEKGD V+ +SA+A+MEI+ VAE LR+ VV+QLL +
Sbjct: 450 CFAVLLEKGDD----EVKSYSALAMMEITDVAEQYPELRRSAFKPTSPAAKAVVEQLLKV 505
Query: 505 VSKGDYDDLLLPCITALGCLARTFTASENRVIAPLVELLDEREPPVIKEAVLALTKFACN 564
+ + + DLL+PCI ++G L+RTF A+E R+I PLV+LLDERE + EA +AL KF+C
Sbjct: 506 I-ENEILDLLIPCIKSIGSLSRTFRATETRIIGPLVKLLDEREAEIAMEAAVALIKFSCT 564
Query: 565 ENHLHVNHCKAIVDSGGARHLVQLVYLGDE-VQIEALILLCFIALHVPESEELAQAGVLA 623
EN L NH KAI+ +GGA+HL+QLVY G++ VQ+ AL+LLC+IAL+VP+SE LAQ VL
Sbjct: 565 ENFLRDNHSKAIIAAGGAKHLIQLVYFGEQMVQVPALMLLCYIALNVPDSETLAQEEVLV 624
Query: 624 VLLWASKQAHMIQDMRVDALLPDAKGRLELFQSRASR 660
VL W++KQAH+++ +D +LP+AK RLEL+QSR SR
Sbjct: 625 VLEWSTKQAHLVEAPTIDEILPEAKSRLELYQSRGSR 661
>AT5G66200.1 | chr5:26453648-26455603 REVERSE LENGTH=652
Length = 651
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 279/683 (40%), Positives = 369/683 (54%), Gaps = 60/683 (8%)
Query: 1 MGEGVKAMLARPIQLADEVAKQCGAARCFRAECGEXXXXXXXXX--XXXXXXXXXXXYDR 58
M + VK +LA+PIQL+D+V K A F+ ECGE Y+R
Sbjct: 1 MADIVKQILAKPIQLSDQVVKAADEASSFKQECGELKAKTEKLAGLLRQAARASNDLYER 60
Query: 59 PAARIMXXXXXXXXXXXXXXXXXXXGHPRLRRLFTLSPAAGFPRTVALLDTALEDVAWLL 118
P RI+ + ++R+FT+ PAA F + L+ ++ DV+WLL
Sbjct: 61 PTRRIIDDTEQMLEKALSLVLKCR-ANGLMKRVFTIIPAAAFRKMSGQLENSIGDVSWLL 119
Query: 119 RISSPRSXXXXXXXXXXXXXXXXXXXXXLRGLPNIAQNEPILFLIWDHVARLHTGGXXXX 178
R+S+P GLP IA NEPIL LIW+ +A L+TG
Sbjct: 120 RVSAP---------------AEDRGDAGYLGLPPIAANEPILCLIWEQIAILYTGSLEDR 164
Query: 179 XXXXXXXXXXXXXXQHFAKLIIEEDGVPPLLRLLKEGTDDGQEAAARALGLLGCDDESID 238
+ KLIIEE GV PLL+LLKEG +GQE AARALGLLG D ES++
Sbjct: 165 SDAAASLVSLARDNDRYTKLIIEEGGVVPLLKLLKEGKPEGQENAARALGLLGRDPESVE 224
Query: 239 KLVQAGVCSVFAAALKDPPMRVQAAVADAIGTLADRSATCQELFAQNNAVRYLVGHLASG 298
++ G CSVF LK+ PM+VQA VA A L CQ++FAQ+NA+R LVGHLA
Sbjct: 225 HMIHGGACSVFGKVLKEGPMKVQAVVAWATSELVSNHPKCQDVFAQHNAIRLLVGHLAFE 284
Query: 299 TIQEHXXXXXXXXXXXXXXXXPQHMTSL-HSVVLAKTLSMRHGGDRGTSSSTDEPPRVSN 357
T+QEH TS+ H+V LAK + ++S+T P +
Sbjct: 285 TVQEHSKYAIATN---------NKATSIHHAVALAKE-------NPNSTSATALPKGLDE 328
Query: 358 EQDT--------KRNQMQSVVQSAMAA------KTKTNG-----SLVPPFRPQLGTSGSS 398
+Q + NQM +VV + MA K+ +NG + P Q + +S
Sbjct: 329 DQSSIPHPTGKQMPNQMHNVVVNTMAVRANPPRKSTSNGVSQSNGVKQPSSVQQHQNSTS 388
Query: 399 GRGAVREVEDPETXXXXXXXXXXXXXXXXXGHLGVCKSITDSRALLCFAVLLEKGDGGMG 458
RE+ED T G+ +CKSIT+SRALLCFAVL+EKGD
Sbjct: 389 SASKTRELEDSATKCQIKAMAARALWKLAKGNSTICKSITESRALLCFAVLIEKGD---- 444
Query: 459 TSVQYFSAMAIMEISRVAEHSLALRQXXXXXXXXXXXXVVDQLLHIVSKGDYDDLLLPCI 518
V+Y SAMA+MEI+ VAE LR+ VVDQ+L I+ D +LL+PCI
Sbjct: 445 EEVRYNSAMALMEITAVAEQDADLRRSAFKPNSPACKAVVDQVLRIIEIAD-SELLIPCI 503
Query: 519 TALGCLARTFTASENRVIAPLVELLDEREPPVIKEAVLALTKFACNENHLHVNHCKAIVD 578
+G LARTF A+E R+I PLV+LLDEREP V EA ALTKFAC N+LH +H + I++
Sbjct: 504 RTIGNLARTFRATETRMIGPLVKLLDEREPEVTGEAAAALTKFACTANYLHKDHSRGIIE 563
Query: 579 SGGARHLVQLVYLGD-EVQIEALILLCFIALHVPESEELAQAGVLAVLLWASKQAHMIQD 637
+GG +HLVQL Y G+ VQI AL LLC+IAL+VP+SE+LA+ VLAVL WASKQ+ + Q
Sbjct: 564 AGGGKHLVQLAYFGEGGVQIPALELLCYIALNVPDSEQLAKDEVLAVLEWASKQSWVTQL 623
Query: 638 MRVDALLPDAKGRLELFQSRASR 660
++ALL +AK L+L+Q R SR
Sbjct: 624 ESLEALLQEAKRGLDLYQQRGSR 646
>AT4G36030.1 | chr4:17045084-17047096 REVERSE LENGTH=671
Length = 670
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/706 (37%), Positives = 370/706 (52%), Gaps = 86/706 (12%)
Query: 1 MGEGVKAMLARPIQLADEVAKQCGAARCFRAECGEXXXXXXXXXXXXXXXXXXXX--YDR 58
MG+ K +L+RPIQLAD+V K A + EC + Y+R
Sbjct: 1 MGDLAKQILSRPIQLADQVVKAGDEATINKQECADIKSKTEKLAALLRQAARASSDLYER 60
Query: 59 PAARIMXXXXXXXXXXXXXXXX-XXXGHPRLRRLFTLSPAAGFPRTVALLDTALEDVAWL 117
P RI+ G+ + RLF + PAA F + ++ L+ ++ DV+WL
Sbjct: 61 PTRRILDDTENVLEKALTMVQRCRDDGY--IMRLFNIIPAAAFRKMISQLENSVGDVSWL 118
Query: 118 LRISSPRSXXXXXXXXXXXXXXXXXXXXXLRGLPNIAQNEPILFLIWDHVARLHTGGXXX 177
LR+S+P GLP IA NEPIL LIW+ +A L TG
Sbjct: 119 LRVSTPAGNDDDEGFGYL-------------GLPPIAANEPILCLIWEQIAVLMTGSPED 165
Query: 178 XXXXXXXXXXXXXXXQHFAKLIIEEDGVPPLLRLLKEGTDDGQEAAARALGLLGCDDESI 237
+ KLI+EE GV PLL+L+KEG DGQE AAR +GLLG D ES+
Sbjct: 166 KSDAAASLASLARDNDRYVKLIVEEGGVNPLLKLVKEGKIDGQENAARTIGLLGRDPESV 225
Query: 238 DKLVQAGVCSVFAAALKDPPMRVQAAVADAIGTL-ADRSATCQELFAQNNAVRYLVGHLA 296
+ ++Q GVCSV ++ LK+ M+VQA VA A+ L + A CQELFAQNN +R LV HLA
Sbjct: 226 EHMIQLGVCSVLSSILKEGSMKVQAVVAWAVSELVSGNHAKCQELFAQNNVIRLLVSHLA 285
Query: 297 SGTIQEHXXXXXXXXXXXXXXXXPQHMTSLHSVVLAKTLSMRHGGDRGT--SSSTDEPPR 354
T+QEH S ++VV + SM H + SSS + P
Sbjct: 286 FETVQEH---------------------SKYAVVAGRATSMHHAVVMASKISSSKENLPA 324
Query: 355 VSNEQDTKR---------NQMQSVVQSAMAAKTKTNGSLV-------------PPFR-PQ 391
++ E+D NQM S+V + MA K +GS PP + P+
Sbjct: 325 LNEEEDDDNHIGVSSPMTNQMHSIVATTMAMKAVGSGSKSNLSSRFVTGDDDKPPEKIPE 384
Query: 392 LGTSGSS---GRGAV------------REVEDPETXXXXXXXXXXXXXXXXXGHLGVCKS 436
S SS G++ RE+EDP T G+ +C+
Sbjct: 385 KSYSMSSQIKAYGSIAHQSRNASVTRGRELEDPVTKTYMKAMAARALWKLAVGNSSICRV 444
Query: 437 ITDSRALLCFAVLLEKGDGGMGTSVQYFSAMAIMEISRVAEHSLALRQXXXXXXXXXXXX 496
IT+SRALLCFAVLL+KGD +Y +AMAIMEI+ VAE + LR+
Sbjct: 445 ITESRALLCFAVLLDKGD----EETKYNTAMAIMEITAVAEENADLRRSAFRRTSPACKA 500
Query: 497 VVDQLLHIVSKGDY-DDLLLPCITALGCLARTFTASENRVIAPLVELLDEREPPVIKEAV 555
VVDQL IV D DLL+PC+ ++G LARTF ++E +I PLV+LLD+ EP + E
Sbjct: 501 VVDQLFRIVENADAGSDLLIPCVRSIGNLARTFKSAETHMIVPLVKLLDDGEPDLAAEVA 560
Query: 556 LALTKFACNENHLHVNHCKAIVDSGGARHLVQLVYLGDE-VQIEALILLCFIALHVPESE 614
+AL KFA +N L H + I+++GG++ LVQL Y G+ QI A++LL ++A++VP+SE
Sbjct: 561 IALAKFATEDNFLGKEHSRTIIEAGGSKLLVQLAYFGENGAQIPAMVLLSYVAMNVPDSE 620
Query: 615 ELAQAGVLAVLLWASKQAHMIQDMRVDALLPDAKGRLELFQSRASR 660
+LA+ VL VL W+SKQA++++D ++ALL +AK RLEL+QSR SR
Sbjct: 621 QLAKDEVLTVLEWSSKQANVLEDEDMEALLYEAKSRLELYQSRGSR 666
>AT3G26600.1 | chr3:9769889-9771736 FORWARD LENGTH=616
Length = 615
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 174/639 (27%), Positives = 270/639 (42%), Gaps = 72/639 (11%)
Query: 26 ARCFRAECGEX------XXXXXXXXXXXXXXXXXXXYDRPAARIMXXXXXXXXXXXXXXX 79
A F+ ECGE YDRP R++
Sbjct: 29 AESFKTECGEVGKQVDRLAQMLRTLVRFVSSSSQQVYDRPIRRVIVDVKKNLERGFALVR 88
Query: 80 XXXXGHPRLRRLFTLSPAAGFPRTVALLDTALEDVAWLLRISSPRSXXXXXXXXXXXXXX 139
H +RR+ T+ AA F + + LL+++ DV W+L +
Sbjct: 89 KCRR-HNIIRRVCTIINAADFRKVINLLESSNGDVKWILSVFDSDGDGSFGGGIVI---- 143
Query: 140 XXXXXXXLRGLPNIAQNEPILFLIWDHVARLHTGGXXXXXXXXXXXXXXXXXXQHFAKLI 199
LP IA N+PIL +W VA + G K+I
Sbjct: 144 ---------SLPPIATNDPILPWVWSLVASIQMGKLVDKIDAANQLGSLAGDNDRNKKII 194
Query: 200 IEEDGVPPLLRLLKEGTD-DGQEAAARALGLLGCDDESIDKLVQAGVCSVFAAALKDPPM 258
++E GV PLLRLLKE + +GQ AAA ALGLL CD++ + +V + L D +
Sbjct: 195 VDEGGVSPLLRLLKESSSAEGQIAAATALGLLACDEDKVRSIVNELGVPIIVQVLGDSSV 254
Query: 259 RVQAAVADAIGTLADRSATCQELFAQNNAVRYLVGHLASGTIQEHXXXXXXXXXXXXXXX 318
RVQ VA + +A+ Q+ FA+ + ++ LV L+ +
Sbjct: 255 RVQIKVATLVARMAEHDPVAQDEFARQSVIKPLVTLLSLDVFVDDIHLS----------- 303
Query: 319 XPQHMTSLHSVVLAKTLSMRHGGDRGTSSSTDEPPRVSNEQDTKRNQMQSVVQSAMAAKT 378
+H S+HS+V M ++ SS P + S +S +
Sbjct: 304 --KH-NSIHSLV-----QMNKEVEKDPSSKLYRPLKSS--------------KSNVYRDI 341
Query: 379 KTNGSLVPPFRPQLGTSGSSGRGAVREVEDPETXXXXXXXXXXXXXXXXXGHLGVCKSIT 438
+GS F+ + R+ E+PE G++ + IT
Sbjct: 342 GGSGSRTGNFKKE------------RDNENPEVKHELKVNCAEALWMLARGNVANSRRIT 389
Query: 439 DSRALLCFAVLLEKGDGGMGTSVQYFSAMAIMEISRVAEHSLALRQXXXXXXXXXXXXVV 498
+++ LL A ++EK G + QY M +MEI+ AE S LR+ V+
Sbjct: 390 ETKGLLSLAKIVEKEVGEL----QYNCLMTLMEITAAAESSADLRRAAFKTNSPAAKAVI 445
Query: 499 DQLLHIVSKGDYDDLLLPCITALGCLARTFTASENRVIAPLVELLDEREPPVIKEAVLAL 558
DQ+L I+ D L +P I ++G LARTF A E R+I PLVE L V AV++L
Sbjct: 446 DQMLWIIKDVDSPILKIPAIQSIGSLARTFPARETRMIKPLVEKLGSSNQEVAITAVISL 505
Query: 559 TKFACNENHLHVNHCKAIVDSGGARHLVQLV-YLGDEVQIEALILLCFIALHVPESEELA 617
KF C EN L H K I++ G L++L+ + ++Q++ L LLC+++++ ++L
Sbjct: 506 QKFVCPENFLCAEHSKNIIEYGAIPLLMKLIRNVEQQMQLQCLALLCYLSVNASNHQQLE 565
Query: 618 QAGVLAVLLWASKQAHMIQDMRVDALLPDAKGRLELFQS 656
QA VL VL A + A + Q+M + L+ A +L L+ +
Sbjct: 566 QAKVLTVLEGAERLAGL-QNMELRELVSKAIYQLSLYNA 603
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,803,156
Number of extensions: 346873
Number of successful extensions: 1012
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 989
Number of HSP's successfully gapped: 7
Length of query: 660
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 555
Effective length of database: 8,227,889
Effective search space: 4566478395
Effective search space used: 4566478395
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)