BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0147400 Os10g0147400|AK102295
(547 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G21050.1 | chr2:9034289-9036439 FORWARD LENGTH=484 698 0.0
AT1G77690.1 | chr1:29201232-29203317 REVERSE LENGTH=471 684 0.0
AT2G38120.1 | chr2:15973493-15976792 FORWARD LENGTH=486 667 0.0
AT5G01240.1 | chr5:98228-101493 FORWARD LENGTH=489 642 0.0
>AT2G21050.1 | chr2:9034289-9036439 FORWARD LENGTH=484
Length = 483
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/433 (76%), Positives = 366/433 (84%)
Query: 50 RTRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFAQLGMASXXXXXXXXXXXXSWTA 109
+++LS + WHGGSAYDAWFSCASNQVAQVLLTLPYSF+QLGM S SWTA
Sbjct: 29 KSKLSDMFWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTA 88
Query: 110 YLISILYLEYRTRKERDKVDFRNHVIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGSVIQL 169
YLISILY+EYRTRKER+KV+FRNHVIQWFEVLDGLLG+HWRNVGLAFNCTFLLFGSVIQL
Sbjct: 89 YLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQL 148
Query: 170 IGCASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYIAVA 229
I CASNIYYIND+LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWY+ +A
Sbjct: 149 IACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIA 208
Query: 230 SLIHGQVEGVAHSGPTSIVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIXXXXXX 289
S++HGQVEGV HSGP+ +VLYFTGATNILYTFGGHAVTVEIMHAMW+PQKFK+I
Sbjct: 209 SILHGQVEGVKHSGPSKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLFATL 268
Query: 290 XXXXXXXPSASAAYWAFGDALLTHSNALALLPRTPWRDAAVVLMLIHQFITFGFACTPLY 349
PSASA YWAFGD LL HSNA ALLP+ +RD AVVLMLIHQFITFGFACTPLY
Sbjct: 269 YVLTLTLPSASAVYWAFGDLLLNHSNAFALLPKNLYRDFAVVLMLIHQFITFGFACTPLY 328
Query: 350 FVWEKLVGLHGCPSLCKRAAARLPVVLPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPS 409
FVWEKL+G+H C S+CKRAAARLPVV+PIWFLAIIFPFFGPINS VGSLLVSFTVYIIP+
Sbjct: 329 FVWEKLIGMHECRSMCKRAAARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPA 388
Query: 410 LAYMVTFRSPQSRQNAVERPPRFAGGWTGAYVINSXXXXXXXXXXXXXXXXXSITNFVHQ 469
LA++ TFRS +R+NAVE+PPRF G WTGA+ IN+ S+ NFVHQ
Sbjct: 389 LAHIFTFRSSAARENAVEQPPRFLGRWTGAFTINAFIVVWVFIVGFGFGGWASMINFVHQ 448
Query: 470 VDTFGLFAKCYQC 482
+DTFGLF KCYQC
Sbjct: 449 IDTFGLFTKCYQC 461
>AT1G77690.1 | chr1:29201232-29203317 REVERSE LENGTH=471
Length = 470
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/437 (74%), Positives = 357/437 (81%)
Query: 46 KTAARTRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFAQLGMASXXXXXXXXXXXX 105
K++ +T+LS WHGGS YDAWFSCASNQVAQVLLTLPYSF+QLGM S
Sbjct: 29 KSSTKTKLSNFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMMSGILFQLFYGLMG 88
Query: 106 SWTAYLISILYLEYRTRKERDKVDFRNHVIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGS 165
SWTAYLIS+LY+EYRTRKER+K DFRNHVIQWFEVLDGLLG+HWRN+GL FNCTFLLFGS
Sbjct: 89 SWTAYLISVLYVEYRTRKEREKFDFRNHVIQWFEVLDGLLGKHWRNLGLIFNCTFLLFGS 148
Query: 166 VIQLIGCASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWY 225
VIQLI CASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MTTYT+WY
Sbjct: 149 VIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLAMTTYTSWY 208
Query: 226 IAVASLIHGQVEGVAHSGPTSIVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIXX 285
+ +ASL+HGQ E V HSGPT++VLYFTGATNILYTFGGHAVTVEIMHAMW+PQKFKAI
Sbjct: 209 LTIASLLHGQAEDVKHSGPTTMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYL 268
Query: 286 XXXXXXXXXXXPSASAAYWAFGDALLTHSNALALLPRTPWRDAAVVLMLIHQFITFGFAC 345
PSASA YWAFGD LLTHSNAL+LLP+T +RD AV+LMLIHQFITFGFA
Sbjct: 269 LATIYVLTLTLPSASAVYWAFGDKLLTHSNALSLLPKTGFRDTAVILMLIHQFITFGFAS 328
Query: 346 TPLYFVWEKLVGLHGCPSLCKRAAARLPVVLPIWFLAIIFPFFGPINSAVGSLLVSFTVY 405
TPLYFVWEKL+G+H S+ KRA ARLPVV+PIWFLAIIFPFFGPINSAVGSLLVSFTVY
Sbjct: 329 TPLYFVWEKLIGVHETKSMFKRAMARLPVVVPIWFLAIIFPFFGPINSAVGSLLVSFTVY 388
Query: 406 IIPSLAYMVTFRSPQSRQNAVERPPRFAGGWTGAYVINSXXXXXXXXXXXXXXXXXSITN 465
IIP+LA+M+TF SR+NAVERPPR GGW G Y IN S+ N
Sbjct: 389 IIPALAHMLTFAPAPSRENAVERPPRVVGGWMGTYCINIFVVVWVFVVGFGFGGWASMVN 448
Query: 466 FVHQVDTFGLFAKCYQC 482
FV Q+DTFGLF KCYQC
Sbjct: 449 FVRQIDTFGLFTKCYQC 465
>AT2G38120.1 | chr2:15973493-15976792 FORWARD LENGTH=486
Length = 485
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/432 (73%), Positives = 353/432 (81%)
Query: 51 TRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFAQLGMASXXXXXXXXXXXXSWTAY 110
+ LS LWHGGS +DAWFSCASNQVAQVLLTLPYSF+QLGM S SWTAY
Sbjct: 36 SNLSNFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAY 95
Query: 111 LISILYLEYRTRKERDKVDFRNHVIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGSVIQLI 170
LIS+LY+EYR RKE++ F+NHVIQWFEVLDGLLG +W+ +GLAFNCTFLLFGSVIQLI
Sbjct: 96 LISVLYVEYRARKEKEGKSFKNHVIQWFEVLDGLLGSYWKALGLAFNCTFLLFGSVIQLI 155
Query: 171 GCASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYIAVAS 230
CASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MTTYTAWY+A+AS
Sbjct: 156 ACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAS 215
Query: 231 LIHGQVEGVAHSGPTSIVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIXXXXXXX 290
+IHGQ EGV HSGPT +VLYFTGATNILYTFGGHAVTVEIMHAMW+PQKFK I
Sbjct: 216 IIHGQAEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLY 275
Query: 291 XXXXXXPSASAAYWAFGDALLTHSNALALLPRTPWRDAAVVLMLIHQFITFGFACTPLYF 350
PSA+A YWAFGDALL HSNA +L+P+ WRDAAV+LMLIHQFITFGFACTPLYF
Sbjct: 276 VFTLTIPSAAAVYWAFGDALLDHSNAFSLMPKNAWRDAAVILMLIHQFITFGFACTPLYF 335
Query: 351 VWEKLVGLHGCPSLCKRAAARLPVVLPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPSL 410
VWEK++G+H S+C RA ARLPVV+PIWFLAIIFPFFGPINSAVG+LLVSFTVYIIPSL
Sbjct: 336 VWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSL 395
Query: 411 AYMVTFRSPQSRQNAVERPPRFAGGWTGAYVINSXXXXXXXXXXXXXXXXXSITNFVHQV 470
A+M+T+RS +RQNA E+PP F WT YV+N+ S+TNFV QV
Sbjct: 396 AHMLTYRSASARQNAAEKPPFFMPSWTAMYVLNAFVVVWVLIVGFGFGGWASVTNFVRQV 455
Query: 471 DTFGLFAKCYQC 482
DTFGLFAKCYQC
Sbjct: 456 DTFGLFAKCYQC 467
>AT5G01240.1 | chr5:98228-101493 FORWARD LENGTH=489
Length = 488
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/431 (71%), Positives = 345/431 (80%), Gaps = 1/431 (0%)
Query: 53 LSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFAQLGMASXXXXXXXXXXXXSWTAYLI 112
+ LWHGGSA+DAWFSCASNQVAQVLLTLPYSF+QLGM S SWTAYLI
Sbjct: 43 MKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLMGSWTAYLI 102
Query: 113 SILYLEYRTRKERDKVD-FRNHVIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGSVIQLIG 171
S+LY+EYR R E+ + F+NHVIQWFEVLDGLLG +W+ GLAFNCTFLLFGSVIQLI
Sbjct: 103 SVLYVEYRARMEKQEAKSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIA 162
Query: 172 CASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYIAVASL 231
CASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MTTYTAWY+ +AS
Sbjct: 163 CASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASF 222
Query: 232 IHGQVEGVAHSGPTSIVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIXXXXXXXX 291
+HGQ EGV HSGPT +VLYFTGATNILYTFGGHAVTVEIMHAMW+P+KFK+I
Sbjct: 223 LHGQAEGVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPRKFKSIYLMATLYV 282
Query: 292 XXXXXPSASAAYWAFGDALLTHSNALALLPRTPWRDAAVVLMLIHQFITFGFACTPLYFV 351
PSASA YWAFGD LL HSNA +LLP+T +RD AV+LMLIHQFITFGFACTPLYFV
Sbjct: 283 FTLTLPSASAVYWAFGDQLLNHSNAFSLLPKTRFRDTAVILMLIHQFITFGFACTPLYFV 342
Query: 352 WEKLVGLHGCPSLCKRAAARLPVVLPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPSLA 411
WEK +G+H SLC RA RLPVV+PIWFLAIIFPFFGPINSAVG+LLV+FTVYIIP+LA
Sbjct: 343 WEKAIGMHHTKSLCLRALVRLPVVVPIWFLAIIFPFFGPINSAVGALLVTFTVYIIPALA 402
Query: 412 YMVTFRSPQSRQNAVERPPRFAGGWTGAYVINSXXXXXXXXXXXXXXXXXSITNFVHQVD 471
+M+T+R+ +R+NA E+PP F W G YVIN+ S+TNF+ Q+D
Sbjct: 403 HMLTYRTASARRNAAEKPPFFIPSWAGVYVINAFIVVWVLVLGFGFGGWASMTNFIRQID 462
Query: 472 TFGLFAKCYQC 482
TFGLFAKCYQC
Sbjct: 463 TFGLFAKCYQC 473
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.139 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,527,590
Number of extensions: 340295
Number of successful extensions: 839
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 838
Number of HSP's successfully gapped: 10
Length of query: 547
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 444
Effective length of database: 8,282,721
Effective search space: 3677528124
Effective search space used: 3677528124
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 114 (48.5 bits)