BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0118800 Os10g0118800|Os10g0118800
         (225 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G25570.1  | chr4:13053887-13055518 REVERSE LENGTH=240          117   5e-27
AT5G38630.1  | chr5:15466141-15467511 FORWARD LENGTH=231          115   1e-26
AT1G14730.1  | chr1:5073244-5074568 FORWARD LENGTH=225             96   2e-20
AT1G26100.1  | chr1:9022716-9024081 REVERSE LENGTH=237             94   5e-20

>AT4G25570.1 | chr4:13053887-13055518 REVERSE LENGTH=240
          Length = 239

 Score =  117 bits (293), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 8/187 (4%)

Query: 38  FRGGVSWSWHRSSTPQLVYTAHPLFMVIGLVICTGEAIMAYRIMLGSREXXXXXXXXXXX 97
           +RGG++W    ++   L++  HP+ M+IG +I  GEAI++Y+ +   +            
Sbjct: 32  YRGGLAW---EATNKNLIFNLHPVLMLIGFIILGGEAIISYKSLPLEKPVKKLIHLILHA 88

Query: 98  XXXXXXXXXXXXXXKFHHDLRAPDIRSLHAWLGITTAALYAFQWLVGFVYFVFPGAVMTM 157
                         K H++   P++ SLH+W+GI   +LY FQW+  F+ F FPG    +
Sbjct: 89  IALALGIFGICAAFKNHNESHIPNLYSLHSWIGIGVISLYGFQWVYSFIVFFFPGGSTNL 148

Query: 158 RADYAPWHILLGIVIFLMAICTAETG-LARFIFPFHG----YPSEAFVVNFTGLAILMFG 212
           ++   PWH +LG+ ++++A+  A  G L +  F  +G    Y SEAF++NFT +  ++FG
Sbjct: 149 KSGLLPWHAMLGLFVYILAVGNAALGFLEKLTFLENGGLDKYGSEAFLINFTAIITILFG 208

Query: 213 VAVVVAA 219
             VV+ A
Sbjct: 209 AFVVLTA 215



>AT5G38630.1 | chr5:15466141-15467511 FORWARD LENGTH=231
          Length = 230

 Score =  115 bits (289), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 9/192 (4%)

Query: 37  HFRGGVSWSWHRSSTPQLVYTAHPLFMVIGLVICTGEAIMAYRIMLGSREXXXXXXXXXX 96
           H+RGG++ S   S     ++  HP+ MVIGL++  GEA++AY+ + G++           
Sbjct: 32  HYRGGLALS---SDNKDHIFNVHPVMMVIGLILFNGEAMLAYKSVQGTKNLKKLVHLTLQ 88

Query: 97  XXXXXXXXXXXXXXXKFHHDLRAPDIRSLHAWLGITTAALYAFQWLVGFVYFVFPGAVMT 156
                          KFH D    +  SLH+WLG+    L+AFQW  GFV + +PG    
Sbjct: 89  LTAFILSLIGVWAALKFHIDKGIENFYSLHSWLGLACLFLFAFQWAAGFVTYWYPGGSRN 148

Query: 157 MRADYAPWHILLGIVIFLMAICTAETGLARFIFPFH------GYPSEAFVVNFTGLAILM 210
            RA   PWH+ LGI I+ +A+ TA TG+   +           Y +EA +VN  G+ IL+
Sbjct: 149 SRASLMPWHVFLGISIYALALVTATTGILEKVTFLQVNQVITRYSTEAMLVNTMGVLILI 208

Query: 211 FGVAVVVAAILP 222
            G  V++  + P
Sbjct: 209 LGGFVILGVVTP 220



>AT1G14730.1 | chr1:5073244-5074568 FORWARD LENGTH=225
          Length = 224

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 81/180 (45%), Gaps = 4/180 (2%)

Query: 37  HFRGGVSWSWHRSSTPQLVYTAHPLFMVIGLVICTGEAIMAYRIMLGSREXXXXXXXXXX 96
           H+R G+ +    S  P  V   HP  M  G +   G+A+M Y+    S +          
Sbjct: 38  HYREGIEYG---SDNPLKVLNVHPFLMYCGFLFLVGQAMMTYKTAYASHQVQKMVHGGLH 94

Query: 97  XXXXXXXXXXXXXXXKFHHDLRAPDIRSLHAWLGITTAALYAFQWLVGFVYFVFPGAVMT 156
                          +FH  +   D+ SLH+W+G+TT  L   QWL G   F+ P +   
Sbjct: 95  LIGLVLGIVGICAAFRFHDKVNLKDMVSLHSWIGLTTFILLGVQWLFGAFTFLAPQSSSG 154

Query: 157 MRADYAPWHILLGIVIFLMAICTAETGL-ARFIFPFHGYPSEAFVVNFTGLAILMFGVAV 215
            R    PWH+L G  +  M I  A TGL  R         +E+ ++NF GLAIL+FGV+V
Sbjct: 155 TRTRMMPWHVLGGRALLYMGIVAALTGLMQRATMLGQSTNAESRLINFLGLAILLFGVSV 214



>AT1G26100.1 | chr1:9022716-9024081 REVERSE LENGTH=237
          Length = 236

 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 90/174 (51%), Gaps = 9/174 (5%)

Query: 57  TAHPLFMVIGLVICTGEAIMAYRIMLGSREXXXXXXXXXXXXXXXXXXXXXXXXXKFHHD 116
           T HPL MVIG ++ +GEAI+ +R + GSR+                         KFH+ 
Sbjct: 42  TLHPLLMVIGFILVSGEAILIHRWLPGSRKTKKAVHLWLQGMALASAVFGIWT--KFHYQ 99

Query: 117 LRA-PDIRSLHAWLGITTAALYAFQWLVGFVYFVFPGAVMTMRADYAPWHILLGIVIFLM 175
                +  SLH+W+G+ + +L+A QW+ GF+ F   G V T R  + PWH+ LG+  + +
Sbjct: 100 RGVFANFYSLHSWMGLLSVSLFAAQWVTGFMSFWHRGEVRTTRTTFLPWHVFLGLYTYGL 159

Query: 176 AICTAETGLAR---FIFPFHGYP---SEAFVVNFTGLAILMFGVAVVVAAILPS 223
           AI TAETGL     F+      P   SE+  VN  GL + + G  V+ AAILP 
Sbjct: 160 AIATAETGLLEKLTFLQTKRNVPRRGSESMTVNGLGLGLALLGCIVITAAILPK 213



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.333    0.142    0.471 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,532,659
Number of extensions: 109277
Number of successful extensions: 354
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 347
Number of HSP's successfully gapped: 4
Length of query: 225
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 130
Effective length of database: 8,502,049
Effective search space: 1105266370
Effective search space used: 1105266370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 110 (47.0 bits)