BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0570900 Os09g0570900|AK071292
         (427 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36840.1  | chr2:15451834-15453550 REVERSE LENGTH=411          441   e-124
AT2G39570.1  | chr2:16507963-16509741 FORWARD LENGTH=412          409   e-114

>AT2G36840.1 | chr2:15451834-15453550 REVERSE LENGTH=411
          Length = 410

 Score =  441 bits (1133), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/424 (53%), Positives = 288/424 (67%), Gaps = 16/424 (3%)

Query: 1   MGIPNPSDEVVQVRHGDVAGEPTVVTISCPDKTGLGCDLCRLVLLFGLNIVKGDMSTDGR 60
           MGI   SD+VV +   +  G+P+V+TI+CPDKTGLGCDLCR++L FGLNIV+GD+STDG+
Sbjct: 1   MGIL--SDDVVIISQSEKEGDPSVITINCPDKTGLGCDLCRILLFFGLNIVRGDVSTDGK 58

Query: 61  WCYIVLWVVARPGRAMAMRWDLLKDRLIQLCP-VAAPFGXXXXXXXXXXXXXXXXXXXXP 119
           WCY+V WV+ +P      RW+LLK RL++  P  +  FG                     
Sbjct: 59  WCYLVFWVIGKPN----TRWNLLKMRLVEASPSFSWAFGISRCYLSDSESQPPKL----- 109

Query: 120 SPNIFLLKFFCYDRMGLLHDVTRVLCELELTIRRVKVSTTPDGRVLDLFFITDARELLHT 179
            P++FLLK  C DR GLL+DVT VL +LE+ I +VK+STTPDG+V+DLFF+TD RELL T
Sbjct: 110 -PDLFLLKLACSDRTGLLYDVTEVLYKLEINIEKVKISTTPDGKVMDLFFVTDTRELLGT 168

Query: 180 KSRREETYDKLQSVLGDSLTSCEIESATEEMSSCLQASTLLPHSAXXXXXXXXXXXXQSR 239
             RR E Y+ L+  +GDS+ S +IE    E+++C  +S++                  + 
Sbjct: 169 VKRRNEVYEYLRDAIGDSMISYDIELVGPEITACSTSSSVAETLFSSDVSGEHSSGLHTS 228

Query: 240 SCGGLSVAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEV 299
           S   +S+A+DNSLS AHTLI I C DHKGL+YDIMRT KD NIQISYGRF      +CE+
Sbjct: 229 S--NVSIAVDNSLSSAHTLIHITCQDHKGLLYDIMRTFKDFNIQISYGRFTIKLGKNCEI 286

Query: 300 DLFAVQSDGKKIVDQHKQRALCCRLRTELHRPLRVALVNRGPDTELLVANPVEVSGKGRP 359
           DLF VQSDG+KI+D  K  AL  RLR EL +PLRV ++NRGPDTELLV NPVE+SGKGRP
Sbjct: 287 DLFIVQSDGRKILDSSKLNALITRLRAELQQPLRVVMMNRGPDTELLVTNPVELSGKGRP 346

Query: 360 LVFYDITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSSL-RSKIVDGVTNML 418
            VF+DI LALKK+   IF AEIGRHV GDREWEVY+V + E D   + RSKI + V   L
Sbjct: 347 QVFHDIALALKKIDTCIFSAEIGRHVTGDREWEVYKVLINEEDSLPIPRSKIEEEVWKTL 406

Query: 419 MGWD 422
           MGW+
Sbjct: 407 MGWE 410



>AT2G39570.1 | chr2:16507963-16509741 FORWARD LENGTH=412
          Length = 411

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/429 (51%), Positives = 278/429 (64%), Gaps = 26/429 (6%)

Query: 1   MGIPNPSDEVVQVRHGDVAGEPTVVTISCPDKTGLGCDLCRLVLLFGLNIVKGDMSTDGR 60
           MGI N  D+ V +  G ++G+PTVVT++CPD++GLG  LCR++L FGL+I + D STDGR
Sbjct: 1   MGILN--DDAVLIEPGKISGDPTVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGR 58

Query: 61  WCYIVLWV---VARPGRAMAMRWDLLKDRLIQLCPVAAPFGXXXXXXXXXXXXXXXXXXX 117
           WCYIV WV   ++ P     + WD LK+RL+  CP                         
Sbjct: 59  WCYIVFWVTPDISSP----KIDWDSLKNRLLSACPSC-----------LGSFYFCLQSNV 103

Query: 118 XPSPNIFLLKFFCYDRMGLLHDVTRVLCELELTIRRVKVSTTPDGRVLDLFFITDARELL 177
              P+++LLKFFC DR GLLHDVT+VL ELE TI+RVKV TTPDGRVLD+FFITDA +LL
Sbjct: 104 SKPPSLYLLKFFCRDRKGLLHDVTKVLTELEFTIQRVKVMTTPDGRVLDMFFITDAMDLL 163

Query: 178 HTKSRREETYDKLQSVLGDSLTSCEIESATEEMSSCLQASTLLPHSAXXXXXXXXXXXXQ 237
           HTK R+ +T D L +VLG+   SCE+E A  E+ S  + S+L P +A             
Sbjct: 164 HTKQRQTKTCDHLTAVLGEHGVSCELELAGPELESVQRFSSLPPLAADELFGPDGFDISG 223

Query: 238 SRSCGGLSVAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSC 297
           S S   + + +DN LSPAHTL+QI+C D KGL YDI+RT KDC++ I+YGRF +   G  
Sbjct: 224 SSSNKAV-LTVDNQLSPAHTLLQIRCVDQKGLFYDILRTSKDCDVHIAYGRFSSKVKGYR 282

Query: 298 EVDLFAVQSDGKKIVDQHKQRALCCRLRTELHRPLRVALVNRGPDTELLVANPVEVSGKG 357
            ++LF   +DG KI+D   Q   C RL+ E+  PLRV +VNRGPDTELLVANPVE+SGKG
Sbjct: 283 NLELFVRGTDGNKIMDPKHQANFCARLKEEMVCPLRVIIVNRGPDTELLVANPVELSGKG 342

Query: 358 RPLVFYDITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSSL-----RSKIVD 412
           RP VFYD+TLALK L   IF AEIGRH   DR+WEVYR  L E     L     R+++VD
Sbjct: 343 RPRVFYDVTLALKSLGICIFSAEIGRHSTLDRQWEVYRFLLDESREFPLASLRARNQVVD 402

Query: 413 GVTNMLMGW 421
            VT  LMGW
Sbjct: 403 RVTKTLMGW 411



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.323    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,791,196
Number of extensions: 334661
Number of successful extensions: 735
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 730
Number of HSP's successfully gapped: 3
Length of query: 427
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 326
Effective length of database: 8,337,553
Effective search space: 2718042278
Effective search space used: 2718042278
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)