BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0570500 Os09g0570500|AK069259
(451 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G04460.1 | chr5:1260009-1263695 FORWARD LENGTH=864 339 2e-93
AT2G27950.1 | chr2:11899422-11903171 REVERSE LENGTH=840 257 1e-68
AT2G34920.1 | chr2:14728375-14730816 REVERSE LENGTH=653 99 4e-21
AT1G30860.1 | chr1:10986696-10989246 REVERSE LENGTH=731 98 7e-21
AT4G20160.1 | chr4:10890983-10894971 FORWARD LENGTH=1189 63 3e-10
AT5G19080.1 | chr5:6378400-6380287 FORWARD LENGTH=379 56 5e-08
AT3G23280.1 | chr3:8321588-8324109 FORWARD LENGTH=463 55 1e-07
AT2G38195.1 | chr2:16003836-16006261 FORWARD LENGTH=400 55 1e-07
AT2G38220.1 | chr2:16008112-16010538 FORWARD LENGTH=405 54 1e-07
AT3G53410.1 | chr3:19801175-19802274 REVERSE LENGTH=300 54 2e-07
AT4G14365.1 | chr4:8271660-8273685 REVERSE LENGTH=377 52 8e-07
AT3G09770.1 | chr3:2996402-2997835 REVERSE LENGTH=389 51 1e-06
AT3G06140.1 | chr3:1856993-1858777 REVERSE LENGTH=360 51 1e-06
AT2G38185.4 | chr2:16000155-16002699 FORWARD LENGTH=448 50 2e-06
>AT5G04460.1 | chr5:1260009-1263695 FORWARD LENGTH=864
Length = 863
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/287 (59%), Positives = 201/287 (70%), Gaps = 4/287 (1%)
Query: 167 WHDDDESNDTADNWHDDNSDQPIDHDSALIRRANTFVPADDDNVYSTELRELLSRRSVSN 226
WH++ S + NW S+ +RR N F P +DDNVYS ELRELLSRRSVSN
Sbjct: 579 WHENS-SRQSDGNWPGTRSEALRSRRVVQLRRLNRFHPPEDDNVYSMELRELLSRRSVSN 637
Query: 227 LLHSAFRENLDRLIRSYVERQGRAPLSWDLEG--APPAPDSPEQSQEQHRDEEEQELHDN 284
LLHS FRE+LD+LI+SY ER+G + WDL PDSPE+ + H+ + N
Sbjct: 638 LLHSGFRESLDQLIQSYAERRGHTHVDWDLHANLQTAIPDSPERDTD-HQVFVRNDNQLN 696
Query: 285 VXXXXXXXXXXXXXXXXXXWHSELHRNNWIRQNIHRSDIEWEAINDLRADMARLQQGMSH 344
WH +LH +W R ++HRS+IEWE +NDLR D+ARLQQGMS
Sbjct: 697 GINGSQLLPTPPAPPPQPIWHQDLHHTSWSRHSMHRSEIEWEVMNDLRGDVARLQQGMSQ 756
Query: 345 MQRMLEACMDMQLELQRSVRQEVSAALNRFIGEQGESKETIDDGSKWIHVRKGTCCICCD 404
MQRMLEACMDMQLELQRSVRQEVSAALNR G+QG S ET +DGS+W HV KGTCC+CCD
Sbjct: 757 MQRMLEACMDMQLELQRSVRQEVSAALNRSAGDQGMSAETSEDGSRWSHVSKGTCCVCCD 816
Query: 405 TPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVIRAYFIM 451
ID+LLYRCGHMCTCSKCANELVR+GGKCPLCRAPIIEVIRAY I+
Sbjct: 817 NHIDALLYRCGHMCTCSKCANELVRNGGKCPLCRAPIIEVIRAYSIL 863
>AT2G27950.1 | chr2:11899422-11903171 REVERSE LENGTH=840
Length = 839
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/286 (46%), Positives = 183/286 (63%), Gaps = 7/286 (2%)
Query: 169 DDDESN--DTADNWHDDNSDQPIDHDSALIRRANTFVPADDDNVYSTELRELLSRRSVSN 226
DDD ++ T +W +++SDQ D+ + RA TF P DD N + ELREL SRR VSN
Sbjct: 558 DDDAASLQSTIQDWSEEHSDQ----DTVSMGRATTFFPPDDGNENNMELRELSSRRRVSN 613
Query: 227 LLHSAFRENLDRLIRSYVERQGRAPLSWDLEGAPPAPDSPEQSQEQHRDEEEQELHDNVX 286
LL S FRENL +LI+SY++R+ + P+ W+ + EQ D + +
Sbjct: 614 LLQSGFRENLSQLIQSYMDRRSQNPVDWEEAETYSDHTIVGEDTEQQDDAQSGGQELDAV 673
Query: 287 XXXXXXXXXXXXXXXXXWHSELHRNNWIRQNIHRS-DIEWEAINDLRADMARLQQGMSHM 345
W + +NW ++H+ ++W++INDLR DM R+QQ M ++
Sbjct: 674 ESPPLTLPSPVIPIQPRWDHDRSHSNWPAHDLHQGIGMDWDSINDLRVDMGRIQQRMDNL 733
Query: 346 QRMLEACMDMQLELQRSVRQEVSAALNRFIGEQGESKETIDDGSKWIHVRKGTCCICCDT 405
QRMLEACM+MQLELQRS+RQEVSAA++R + G SK+T SKW +VRKG CC+CC++
Sbjct: 734 QRMLEACMEMQLELQRSIRQEVSAAMHRSTDQPGPSKDTASYESKWEYVRKGICCVCCES 793
Query: 406 PIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVIRAYFIM 451
IDSLLYRCGHM TC KCA +LV +GGKCP+C+AP+IEV+RAY I+
Sbjct: 794 NIDSLLYRCGHMNTCEKCAKKLVEAGGKCPMCQAPVIEVVRAYSIL 839
>AT2G34920.1 | chr2:14728375-14730816 REVERSE LENGTH=653
Length = 652
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 56/233 (24%)
Query: 218 LLSRRSVSNLLHSAFRENLDRLIRSYVERQGRAPLSWDLEGAPPAPDSPEQSQEQHRDEE 277
LL RR+VS L S RE +D+LI S V+ PA E ++E+ + +
Sbjct: 471 LLERRTVSGFLQSGLREKIDKLIMSRVQIH-------------PAHRIEEATKEEEKYDI 517
Query: 278 EQELHDNVXXXXXXXXXXXXXXXXXXWHS-ELHRNNWIRQNIHRSDIEWEAINDLRADMA 336
+E ++ W S + + N+H +
Sbjct: 518 GEEKDEDRDDLSQSSSQIFAPSPAGSWSSLDTGVTSTPTHNLHST--------------- 562
Query: 337 RLQQGMSHMQRMLEACMDMQLELQRSVRQEVSAALNRFIGEQGESKETIDDGSKWIHVRK 396
LQ MS ++ ++ C+D+ LQ+SV E N F K
Sbjct: 563 -LQLEMSELRDSVKTCLDVNASLQKSVHLE-----NPF---------------------K 595
Query: 397 GTCCICCDTPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVIRAYF 449
CC+C +T +++LLYRCGHMCTC +CANEL +GGKCP+C A I++V+R +
Sbjct: 596 RKCCVCNETQVETLLYRCGHMCTCLRCANELQYNGGKCPICHAKILDVVRVFV 648
>AT1G30860.1 | chr1:10986696-10989246 REVERSE LENGTH=731
Length = 730
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 39/241 (16%)
Query: 218 LLSRRSVSNLLHSAFRENLDRLIRSYVERQG-RAPLSWDLEGAPPAPDS----PEQSQEQ 272
LL RR+V++ L S RE +D L+ S V+ + W+L+ + E +E
Sbjct: 516 LLERRTVTDFLDSGLREKIDNLMMSRVQTHSDKHSKKWELQQEEEEEVNFEIDEEIKEEP 575
Query: 273 HRDEEEQELHDNVXXXXXXXXXXXXXXXXXXWHSE----LHRNNWIRQNIHRSDIEWEAI 328
R EEQ+ D++ W S+ + QN E E I
Sbjct: 576 LRGGEEQDDRDDLSQSSSSHISASSPAGS--WSSQDTDVTSTPALVVQNPQSP--EMELI 631
Query: 329 NDLRADMARLQQGMSHMQRMLEACMDMQLELQRSVRQEVSAALNRFIGEQGESKETIDDG 388
+ +R+ + +LQQ MS ++ ++ C+D LQ QE
Sbjct: 632 SGMRSQIQQLQQEMSVLRDSVKTCLDANASLQHKAHQE---------------------- 669
Query: 389 SKWIHVRKGTCCICCDTPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVIRAY 448
+ K CC+C +T ++++LYRCGHMC C KCANEL SGGKCP+CRA I++V+R
Sbjct: 670 ----NPMKRKCCVCDETQVEAVLYRCGHMCMCLKCANELHWSGGKCPICRAQIVDVVRVI 725
Query: 449 F 449
+
Sbjct: 726 Y 726
>AT4G20160.1 | chr4:10890983-10894971 FORWARD LENGTH=1189
Length = 1188
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 12/95 (12%)
Query: 324 EWEAINDLRADMARLQQGMSHMQRMLEACMDMQLELQRSVRQEVSAALNRFIGEQGESKE 383
+ + I+DL+ M +LQ+ M ++ +++C+DMQL Q+SV Q++S + G S E
Sbjct: 1094 DMQTISDLKEQMEQLQREMLELRNTVKSCIDMQLHFQKSVTQDLSRS--------GSSAE 1145
Query: 384 TIDDGSKWIHVRKGTCCICCDTPIDSLLYRCGHMC 418
D K RK CC+C + P+DSLLYR + C
Sbjct: 1146 QRVDPKKDPLKRK--CCVCSEMPVDSLLYR--YFC 1176
>AT5G19080.1 | chr5:6378400-6380287 FORWARD LENGTH=379
Length = 378
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 399 CCICCDTPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVIR 446
C IC P D+ + C H+C CS CA EL KCP+CR PI E+++
Sbjct: 321 CVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVK 368
>AT3G23280.1 | chr3:8321588-8324109 FORWARD LENGTH=463
Length = 462
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 397 GTCCICCDTPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVIRAYFI 450
GTC IC D P +++ CGH+ C C E+ CP+CRA I +VI+ Y +
Sbjct: 409 GTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYRV 462
>AT2G38195.1 | chr2:16003836-16006261 FORWARD LENGTH=400
Length = 399
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 396 KGTCCICCDTPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVIRAY 448
K C IC D P D CGH +C +C ++ R+ G+CP+CR I+ V R Y
Sbjct: 345 KSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRIY 397
>AT2G38220.1 | chr2:16008112-16010538 FORWARD LENGTH=405
Length = 404
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 396 KGTCCICCDTPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVIRAY 448
K C IC D P D CGH +C +C ++ R+ G+CP+CR +I V R Y
Sbjct: 350 KSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKMIHVKRIY 402
>AT3G53410.1 | chr3:19801175-19802274 REVERSE LENGTH=300
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 361 RSVRQEVSAALNRFIGEQGES-KETIDDGSKWIHVRKGTCCICCDTPIDSLLYRCGHMCT 419
R V+Q + NR++ ++ T+DD + + R C IC P D+ + C HMC
Sbjct: 204 RVVKQILWVNGNRYVLQEIYGIGNTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCM 263
Query: 420 CSKCANELVRSGGKCPLCRAPI 441
CS CA L CP+CR P+
Sbjct: 264 CSGCAKLLRFQTNLCPICRQPV 285
>AT4G14365.1 | chr4:8271660-8273685 REVERSE LENGTH=377
Length = 376
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 397 GTCCICCDTPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVIRAYFI 450
G C IC D P +++ CGH+ C C E+ CP+CRA I +VI+ Y +
Sbjct: 323 GLCVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLYHV 376
>AT3G09770.1 | chr3:2996402-2997835 REVERSE LENGTH=389
Length = 388
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 399 CCICCDTPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPI 441
C IC P D+ + C HMC CS CA L +CP+CR P+
Sbjct: 319 CVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPV 361
>AT3G06140.1 | chr3:1856993-1858777 REVERSE LENGTH=360
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 399 CCICCDTPIDSLLYRCGHMCTCSKCANELVRSGGKCPLCRAPIIEVI 445
C IC D+ + C H+C CS CA EL KCP+CR PI E++
Sbjct: 302 CVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELL 348
>AT2G38185.4 | chr2:16000155-16002699 FORWARD LENGTH=448
Length = 447
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 369 AALNRFIGEQGESKETIDDGSKWIHVRKGTCCICCDTPIDSLLYRCGHMCTCSKCANELV 428
A L F+G GE+ + C IC D P D CGH +C +C +
Sbjct: 376 ADLEEFMGNDGEASNR----------SRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQ 425
Query: 429 RSGGKCPLCRAPIIEVIRAYFI 450
+ G CP+CR + +V R Y +
Sbjct: 426 EADGSCPICRRKMKKVKRIYTV 447
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.130 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,909,653
Number of extensions: 513297
Number of successful extensions: 2416
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 2444
Number of HSP's successfully gapped: 16
Length of query: 451
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 349
Effective length of database: 8,310,137
Effective search space: 2900237813
Effective search space used: 2900237813
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 113 (48.1 bits)