BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0569300 Os09g0569300|AK069587
         (222 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G49050.1  | chr3:18181498-18183613 FORWARD LENGTH=478          238   1e-63
AT4G00500.1  | chr4:225214-226978 REVERSE LENGTH=461              183   7e-47
AT5G37710.1  | chr5:14979159-14981400 FORWARD LENGTH=437          171   2e-43

>AT3G49050.1 | chr3:18181498-18183613 FORWARD LENGTH=478
          Length = 477

 Score =  238 bits (608), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 126/215 (58%), Positives = 146/215 (67%), Gaps = 30/215 (13%)

Query: 38  CIRCLRDTCIPEDAMLKDPRRLYAPGRIYHIVERKMFRCGRYPPVVKTAVPVDGRFEHIV 97
           CIRC++DTC+PE  MLKDPRRLYAPGR+YHIVERK  R GRYPPVVKTAVPVDGRFEHIV
Sbjct: 262 CIRCMKDTCVPEQKMLKDPRRLYAPGRMYHIVERKPCRLGRYPPVVKTAVPVDGRFEHIV 321

Query: 98  LSCNATMDHAIIWIEREAQKALDLMLEKEKTMEVPSEQRMERNESLQREHVEEHKAALRR 157
           LSCNAT DHAIIWIEREAQ+AL+LM+E EK ME+P +QRMER ESL REH  E++AALRR
Sbjct: 322 LSCNATSDHAIIWIEREAQRALNLMMENEKKMEIPEKQRMERQESLAREHNLEYRAALRR 381

Query: 158 AVTLSVPDARSPS-AYGTF-----------------------------GEQPERSESFPP 187
           AVTL VP A S +  YGTF                             GE    S   P 
Sbjct: 382 AVTLDVPHAESMAYEYGTFDKTQEDETEEEEVETEEEEEDTDSIAPMVGESSSSSSVKPT 441

Query: 188 VSAMARQRMSWNDLIERVFDRDESGHIVLRSSPSP 222
                 +R+SW++LIE +F+RDESG++    S  P
Sbjct: 442 YRIRRNRRVSWDELIEHLFERDESGNLTFEKSDLP 476



>AT4G00500.1 | chr4:225214-226978 REVERSE LENGTH=461
          Length = 460

 Score =  183 bits (464), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 97/187 (51%), Positives = 129/187 (68%), Gaps = 9/187 (4%)

Query: 43  RDTCIPEDAMLKDPRRLYAPGRIYHIVERKMFRCGRYPPVVKTAVPVDGRFEHIVLSCNA 102
           +DT   E+  LKD RRLYAPGR+YHIV RK  R GRYPPVV+TAVPVDGRFE IVLSCNA
Sbjct: 266 KDTFTFEERKLKDARRLYAPGRLYHIVVRKPLRLGRYPPVVRTAVPVDGRFEQIVLSCNA 325

Query: 103 TMDHAIIWIEREAQKALDLMLEKEKTMEVPSEQRMERNESLQREHVEEHKAALRRAVTLS 162
           T DHAIIWIERE+Q+ALDLM+E+++ M++P EQ++ R +S+  +H EE++AA+ +A +L+
Sbjct: 326 TADHAIIWIERESQRALDLMVEEDQVMQIPVEQKIVRQKSIVEDHDEEYRAAIMKAASLN 385

Query: 163 VPDARSPSAYGTF-----GEQPERS--ESFPPVSAMARQRMSWNDLIERVFD-RDESGHI 214
           +P + SPS YGTF     GE    S  E  P   +    R  W+  I+  F   D S H+
Sbjct: 386 IPMSPSPS-YGTFHDTEEGESSAGSGMEGSPSGWSFKGMRRKWDQFIDCHFPVNDNSEHM 444

Query: 215 VLRSSPS 221
           + ++  S
Sbjct: 445 IFKNQES 451



>AT5G37710.1 | chr5:14979159-14981400 FORWARD LENGTH=437
          Length = 436

 Score =  171 bits (434), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/185 (50%), Positives = 123/185 (66%), Gaps = 16/185 (8%)

Query: 41  CLRDTCIPEDAMLKDPRRLYAPGRIYHIVERKMFRCGRYPPVVKTAVPVDGRFEHIVLSC 100
           CLRDT IPE   L+DPRRLYAPGRIYHIVERK   C R+PP V+TA+PVDGRFEHIVLS 
Sbjct: 263 CLRDTFIPEGRKLRDPRRLYAPGRIYHIVERKF--C-RFPPEVRTAIPVDGRFEHIVLSS 319

Query: 101 NATMDHAIIWIEREAQKALDLMLEKEKTMEV---PSEQRMERNESLQREHVEEHKAALRR 157
           NAT DHAI+WIEREA+KAL ++ EK     V   P E+RMER  +L++    EHK AL R
Sbjct: 320 NATSDHAILWIEREAEKALQILREKSSETVVTMAPKEKRMERLSTLEK----EHKDALER 375

Query: 158 AVTLSVPDARSPSAYGTFGEQPERSESFPPVSAMARQRMSWNDLIERVFDRDESGHIVLR 217
           AV+L++P A S +         E S      + +  ++ +W+++++++F R  SG  VL 
Sbjct: 376 AVSLNIPHAVSTAEEEEECNNGEAS------AELKTKKKNWDEVVDKLFHRSNSGEFVLN 429

Query: 218 SSPSP 222
            +  P
Sbjct: 430 DNVVP 434



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.134    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,794,764
Number of extensions: 181601
Number of successful extensions: 622
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 617
Number of HSP's successfully gapped: 3
Length of query: 222
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 127
Effective length of database: 8,502,049
Effective search space: 1079760223
Effective search space used: 1079760223
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)