BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0568200 Os09g0568200|J090023D18
(134 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27470.1 | chr2:11745196-11746375 REVERSE LENGTH=276 114 1e-26
AT4G14540.1 | chr4:8344663-8345148 FORWARD LENGTH=162 62 1e-10
AT5G47640.1 | chr5:19309414-19309986 FORWARD LENGTH=191 61 2e-10
AT2G38880.8 | chr2:16238685-16240316 FORWARD LENGTH=165 56 6e-09
AT2G37060.1 | chr2:15576336-15577660 FORWARD LENGTH=174 55 9e-09
AT3G53340.1 | chr3:19774667-19775991 REVERSE LENGTH=177 54 2e-08
AT2G13570.1 | chr2:5655842-5656489 REVERSE LENGTH=216 54 3e-08
AT5G47670.1 | chr5:19315061-19315975 FORWARD LENGTH=235 50 3e-07
AT5G08190.1 | chr5:2636204-2637125 FORWARD LENGTH=164 50 3e-07
AT1G21970.1 | chr1:7727750-7729571 REVERSE LENGTH=239 50 4e-07
AT5G23090.2 | chr5:7749391-7750203 FORWARD LENGTH=160 50 5e-07
AT2G47810.1 | chr2:19582938-19583420 REVERSE LENGTH=161 46 5e-06
>AT2G27470.1 | chr2:11745196-11746375 REVERSE LENGTH=276
Length = 275
Score = 114 bits (285), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
LP AIVRR+VK+KL++ + +V ++K+A+ AF+ESARIFIHYLSATAND CK+++RQT
Sbjct: 11 LPLAIVRRVVKKKLSECSPD-YDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQT 69
Query: 91 INADDVLKALDEMEFPEFVEPLNTSLQ 117
+ ADDV KAL+EM+F EF+EPL +SL+
Sbjct: 70 MKADDVFKALEEMDFSEFLEPLKSSLE 96
>AT4G14540.1 | chr4:8344663-8345148 FORWARD LENGTH=162
Length = 161
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
LP A V R++K+ L A ++KDA E FI +++ A+D C+ KR+T
Sbjct: 26 LPIANVSRIMKKALP------ANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 79
Query: 91 INADDVLKALDEMEFPEFVEPLNTSLQ 117
IN DD+L A+ + F ++VEPL LQ
Sbjct: 80 INGDDLLWAMTTLGFEDYVEPLKVYLQ 106
>AT5G47640.1 | chr5:19309414-19309986 FORWARD LENGTH=191
Length = 190
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
LP A V R++K+ L A ++KDA E FI +++ A+D C++ KR+T
Sbjct: 32 LPIANVSRIMKKALP------ANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKT 85
Query: 91 INADDVLKALDEMEFPEFVEPLNTSLQ 117
IN DD+L A+ + F ++VEPL LQ
Sbjct: 86 INGDDLLWAMTTLGFEDYVEPLKVYLQ 112
>AT2G38880.8 | chr2:16238685-16240316 FORWARD LENGTH=165
Length = 164
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
LP A + R++K+ L + KDA E FI ++++ A+D C++ KR+T
Sbjct: 26 LPIANISRIMKKALPPNGK------IGKDAKDTVQECVSEFISFITSEASDKCQKEKRKT 79
Query: 91 INADDVLKALDEMEFPEFVEPLNTSL 116
+N DD+L A+ + F +++EPL L
Sbjct: 80 VNGDDLLWAMATLGFEDYLEPLKIYL 105
>AT2G37060.1 | chr2:15576336-15577660 FORWARD LENGTH=174
Length = 173
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
LP A + R++K L A + KDA E FI ++++ A+D C+ KR+T
Sbjct: 35 LPIANISRIMKRGLP------ANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKT 88
Query: 91 INADDVLKALDEMEFPEFVEPLNTSL 116
IN DD+L A+ + F +++EPL L
Sbjct: 89 INGDDLLWAMATLGFEDYMEPLKVYL 114
>AT3G53340.1 | chr3:19774667-19775991 REVERSE LENGTH=177
Length = 176
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
LP A + R++K L + KDA E FI ++++ A+D C+ KR+T
Sbjct: 34 LPIANISRIMKRGLPLNGK------IAKDAKETMQECVSEFISFVTSEASDKCQREKRKT 87
Query: 91 INADDVLKALDEMEFPEFVEPLNTSL 116
IN DD+L A+ + F ++++PL L
Sbjct: 88 INGDDLLWAMATLGFEDYIDPLKVYL 113
>AT2G13570.1 | chr2:5655842-5656489 REVERSE LENGTH=216
Length = 215
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
LP A V R++K +V G ++ +KDA E FI +++ A+D C+ KR+T
Sbjct: 41 LPIANVGRIMK----KVLPGNGKI--SKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94
Query: 91 INADDVLKALDEMEFPEFVEPLNTSL 116
IN DD++ A+ + F ++V PL L
Sbjct: 95 INGDDIIWAITTLGFEDYVAPLKVYL 120
>AT5G47670.1 | chr5:19315061-19315975 FORWARD LENGTH=235
Length = 234
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
+P A V R+++ L A ++ D+ E +I +++ AN+ C+ +R+T
Sbjct: 63 MPIANVIRIMRRILP------AHAKISDDSKETIQECVSEYISFITGEANERCQREQRKT 116
Query: 91 INADDVLKALDEMEFPEFVEPLNTSLQ 117
I A+DVL A+ ++ F +++EPL L
Sbjct: 117 ITAEDVLWAMSKLGFDDYIEPLTLYLH 143
>AT5G08190.1 | chr5:2636204-2637125 FORWARD LENGTH=164
Length = 163
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
LPKA + +++KE L A+V V +DA E FI+ +S+ +N++C + ++T
Sbjct: 16 LPKATMTKIIKEMLP------ADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRT 69
Query: 91 INADDVLKALDEMEFPEFVEPL 112
I + VLKAL + F E+VE +
Sbjct: 70 IAPEHVLKALQVLGFGEYVEEV 91
>AT1G21970.1 | chr1:7727750-7729571 REVERSE LENGTH=239
Length = 238
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
+P A V R++++ L A ++ DA E +I +++ AN+ C+ +R+T
Sbjct: 64 MPIANVIRIMRKTLPSHAK------ISDDAKETIQECVSEYISFVTGEANERCQREQRKT 117
Query: 91 INADDVLKALDEMEFPEFVEPL 112
I A+D+L A+ ++ F +V+PL
Sbjct: 118 ITAEDILWAMSKLGFDNYVDPL 139
>AT5G23090.2 | chr5:7749391-7750203 FORWARD LENGTH=160
Length = 159
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
LPKA + +++KE L +V V +DA E FI+ +S+ +ND+C + ++T
Sbjct: 16 LPKATMTKIIKEMLP------PDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRT 69
Query: 91 INADDVLKALDEMEFPEFVE 110
I + VLKAL + F E++E
Sbjct: 70 IAPEHVLKALQVLGFGEYIE 89
>AT2G47810.1 | chr2:19582938-19583420 REVERSE LENGTH=161
Length = 160
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 31 LPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDMCKESKRQT 90
LP A V R++K L A V+K+A E FI +++ A+D C + KR+T
Sbjct: 56 LPIANVGRIMKNILP------ANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKT 109
Query: 91 INADDVLKALDEMEFPEFVEPLNTSLQ 117
+N DD+ A+ + F ++ L L
Sbjct: 110 VNGDDICWAMANLGFDDYAAQLKKYLH 136
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,497,129
Number of extensions: 73332
Number of successful extensions: 196
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 195
Number of HSP's successfully gapped: 12
Length of query: 134
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 46
Effective length of database: 8,693,961
Effective search space: 399922206
Effective search space used: 399922206
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 106 (45.4 bits)