BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0562400 Os09g0562400|Os09g0562400
(1972 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64260.1 | chr1:23847756-23849915 FORWARD LENGTH=720 142 2e-33
AT1G48120.1 | chr1:17774238-17779624 REVERSE LENGTH=1341 140 6e-33
AT1G64255.1 | chr1:23844954-23847206 FORWARD LENGTH=751 126 1e-28
AT1G49920.1 | chr1:18481798-18484233 REVERSE LENGTH=786 123 9e-28
AT2G04865.1 | chr2:1712149-1714599 FORWARD LENGTH=668 102 2e-21
AT2G25010.1 | chr2:10631691-10633547 FORWARD LENGTH=510 100 1e-20
AT1G17930.1 | chr1:6166638-6168432 REVERSE LENGTH=479 86 2e-16
>AT1G64260.1 | chr1:23847756-23849915 FORWARD LENGTH=720
Length = 719
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/573 (21%), Positives = 245/573 (42%), Gaps = 79/573 (13%)
Query: 221 GARYAHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWK 280
G + +DE+K+AV W + +R V ++ +Y C++ C W + A + + + +
Sbjct: 188 GLCFKDRDELKKAVDWWCIRRRRNCIVRETEKEMYTFECVRWKCKWSLRAARMEEHGLVE 247
Query: 281 VSIVT-EHKCYLQGVEKYHRNITSAFVASEMYSSVVGNIGFEPKSIIRHIENKFKYTISY 339
++ T H C +Y + S F A E+ V + + + K Y +
Sbjct: 248 ITKYTGPHTC----SHEYPNDFESEFAADEIERVVRIQPTLSIAELKKWWKEKTGYELQT 303
Query: 340 AKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNN---NTYYDLHTFTSVDDRTKSVL 396
+K K ++I+ +G + S+ +P+L++ N + YDL F + D +
Sbjct: 304 SKMRDGKLEVIKRVFGDEDQSFRVMPKLISAFHSSNGLLVDWQYDL--FPNPDFAS---F 358
Query: 397 QRAFFSLGACINAFVHCRPVLCIDGTFMTGKYRGQILTAIGCDGNNQVLPMAFAFVESEN 456
+ F+S I F HCRP++ +D + GKY+ +++ A G D N+ P+AFA + +
Sbjct: 359 RGVFWSFSQSIEGFQHCRPLIVVDTKSLNGKYQLKLMIASGVDAANKFFPLAFAVTKEVS 418
Query: 457 TESWYWFLERVHIAVVRMRPNVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDVRSRWC 516
T+SW WF ++ V + R ++CLI ++ ++ + W E P ++C
Sbjct: 419 TDSWRWFFTKIREKVTQ-RKDLCLISSPLRDIVAVVNEPGSLWQE-------PWAHHKFC 470
Query: 517 MRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEQSRRPLVEGD 576
+ H+ + F F++ +L L ++ + NQ+++F+ + + E
Sbjct: 471 LNHLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSYMNDIKE------------------ 512
Query: 577 EPPIPLGALHDDPPTMRRRSGSSIRNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEV 636
+P + W++ P+ KW+L D+ G RYGI+ + +
Sbjct: 513 ----------KNPEAWK------------WLDQIPRHKWALAHDS-GLRYGIIEIDREAL 549
Query: 637 YNWVMRGVRVLPLVAIVEFILHGTQAYFRDRYKKIGPSMAD--NNIVFGNVVTKYMEDKI 694
+ V RG P + + G F + S++ +++ G V T+ DK+
Sbjct: 550 FA-VCRG---FPYCTVA--MTGGVMLMFDELRSSFDKSLSSIYSSLNRGVVYTEPFMDKL 603
Query: 695 KKARRHRVVAQGTQVHRYEIMCVDRSRRGIYRKQAVQECVLKADGGCTCSCMKPKLHHLP 754
++ + TQ+ R + S + +E +++ + TC+C K + + P
Sbjct: 604 EEFMTDSIPYVITQLERDSFKVSESSEK--------EEWIVQLNVS-TCTCRKFQSYKFP 654
Query: 755 CSHVLAAAGDCGISPNVYVSNYFRKEAIFHTWS 787
C H LA I+P YV + E T++
Sbjct: 655 CLHALAVFEKLKINPLQYVDECYTVEQYCKTYA 687
>AT1G48120.1 | chr1:17774238-17779624 REVERSE LENGTH=1341
Length = 1340
Score = 140 bits (354), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 171/386 (44%), Gaps = 49/386 (12%)
Query: 956 DRSLLAALIDRWRPETHTFHLPCGEMAPTLQDVSYXXXXXXXXXXXXXXDGVFGWKEDIT 1015
D +L+ AL++RWRPETHTFHLP GE+ TLQDV+ + W +
Sbjct: 81 DYALITALVERWRPETHTFHLPAGEITVTLQDVNILLGLRVDGPAVTGSTK-YNWAD--- 136
Query: 1016 ARFEQVMRXXXXXXXXXXXXYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEAYLLWLF 1075
E ++ S AWL + +L D D+ +++ A++L L
Sbjct: 137 -LCEDLLGHRPGPKDLHGSHVSL-----AWLRENFRNL-PADPDEVTLKCHTRAFVLALM 189
Query: 1076 GWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAGA 1135
++ H V + R +V + SWGSA LA YR LC A +T +
Sbjct: 190 SGFLYGDKSKHDVALTFLPLLRDF-----DEVAKLSWGSATLALLYRELCRASKRT--VS 242
Query: 1136 IIAGCPMLLQLWAAERFAIGRPVVDSAPYGVGRSAQWPEDGPTMGTYWCRRGRRYAHVQV 1195
I G +LLQLWA ER +GRP VG S DGP CR +H +
Sbjct: 243 TICGPLVLLQLWAWERLHVGRP---GRLKDVGASYMDGIDGPLPDPLGCRWRASLSHKEN 299
Query: 1196 RRGYPDFVF-EFDRLQPSDVIWEPYTEEAVAARAPLGLSSLCTRDQAYWLTILPMV-FDI 1253
RG DF +FD+ + VIW+PYT + +A + PL +C + W T+ P++ FD+
Sbjct: 300 PRGGLDFYRDQFDQQKDEQVIWQPYTPDLLA-KIPL----ICVSGENIWRTVAPLICFDV 354
Query: 1254 FVEPHCPQRVMRQFGLRQLAGAL-------------------WAPRVQQYVDDWVLATEE 1294
VE H P RV+RQFGL Q A W+ R +++ W
Sbjct: 355 -VEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEARVSS 413
Query: 1295 VINELFPHTEENYRD-YLRWYLPRTR 1319
V++ + +Y D Y+ WY TR
Sbjct: 414 VVSGEPECSPMDYNDPYMEWYRRITR 439
>AT1G64255.1 | chr1:23844954-23847206 FORWARD LENGTH=751
Length = 750
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/578 (21%), Positives = 242/578 (41%), Gaps = 87/578 (15%)
Query: 221 GARYAHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWK 280
G + DE+K+AV ++ Q++ V ++ Y C++ C W + A + K + +
Sbjct: 195 GLCFKDGDELKKAVDWCSLKAQQKCVVRETAKDEYIFECIRWKCKWSLGAARMKKHGLVE 254
Query: 281 VSIVT-EHKCYLQGVEKYHRNITSAFVASEMYSSVVGNIGFEPKSIIRHIENKFKYTISY 339
+ T H C+ E + S F E+ +V + P I ++ +K I Y
Sbjct: 255 IIKYTGPHTCHPIVPEDFK----SEFETDEIERAV----RYMPTQTISELKKWWKKKIGY 306
Query: 340 ----AKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNN---NTYYDLHTFTSVDDRT 392
+ AK+K I+ +G ++ S+++ P+L++ + N + YDL +
Sbjct: 307 ELETSDVRLAKEKAIKRVFGDWDQSFEDFPKLMSALCSSNGLLVDWKYDLFP-----NPN 361
Query: 393 KSVLQRAFFSLGACINAFVHCRPVLCIDGTFMTGKYRGQILTAIGCDGNNQVLPMAFAFV 452
+ F++ I F HCRP++ +D + +Y+ +++ A G D N+ P+AFA
Sbjct: 362 FASFCGVFWAFPQSIEGFQHCRPLIVVDTKNLNCEYQLKLMIASGVDAANKYFPLAFAVT 421
Query: 453 ESENTESWYWFLERVHIAVVRMRPNVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDVR 512
+ +T+ W WFL + V + R +CLI H ++ ++ + W E P
Sbjct: 422 KEVSTDIWRWFLTGIREKVTQ-RKGLCLISSPHPDIIAVVNESGSQWQE-------PWAY 473
Query: 513 SRWCMRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEQSRRPL 572
R+ + H + F + F + L +R + +Q+ DE + D + + P
Sbjct: 474 HRFSLNHFYSQFSRVFPSFCLGARIRRAGSTSQK----------DEFVSYMNDIKEKNPE 523
Query: 573 VEGDEPPIPLGALHDDPPTMRRRSGSSIRNFTQWIENEPKEKWSLLFDTDGSRYGIMTTN 632
+W++ P+ +W+L D +G RYGIM N
Sbjct: 524 AR------------------------------KWLDQFPQNRWALAHD-NGRRYGIMEIN 552
Query: 633 ---LAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFRDRYKKIGPSMADNNIVFGNVVTKY 689
L V N + V+ ++ F R ++ K S + +++ G+V T+
Sbjct: 553 TKALFAVCNAFEQAGHVVTGSVLLLF------DELRSKFDK-SFSCSRSSLNCGDVYTEP 605
Query: 690 MEDKIKKARRHRVVAQGTQVHRYEIMCVDRSRRGIYRKQAVQECVLKADGGCTCSCMKPK 749
+ DK+++ R V + Y + +D + + EC+++ C+C+C +
Sbjct: 606 VMDKLEEFRTTFV------TYSYIVTPLDNNAFQVATALDKGECIVQL-SDCSCTCGDFQ 658
Query: 750 LHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHTWS 787
+ PC H LA +P YV + + E + T++
Sbjct: 659 RYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYA 696
>AT1G49920.1 | chr1:18481798-18484233 REVERSE LENGTH=786
Length = 785
Score = 123 bits (309), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 117/575 (20%), Positives = 239/575 (41%), Gaps = 78/575 (13%)
Query: 229 EMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWKVSIVT-EH 287
EMK+AV ++ +++ + ++ VY V C + C W + A + + + ++++ + H
Sbjct: 191 EMKKAVDWCSIKRRQKCLLRETEKDVYVVECERWHCKWSICASRREEDGLFEITECSGPH 250
Query: 288 KCYLQGVEKYHRN-----------ITSAFVASEMYSSVVGNIGFEPKSIIRHIENKFKYT 336
CY + + + + +E+ GF ++ H
Sbjct: 251 DCYPEHLNDFDAECIPFQIERVVRVQPTLSTAELDKWWEKKFGFALDQVVEHC------- 303
Query: 337 ISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVL 396
S AK K I+ +G ++ S+ +P+L++ + +N D + D +
Sbjct: 304 -SEGLVEDAKVKAIKRFFGDWDQSFRLIPKLMSVL-HSSNGLLVDWQYDSLTHDPEHASF 361
Query: 397 QRAFFSLGACINAFVHCRPVLCIDGTFMTGKYRGQILTAIGCDGNNQVLPMAFAFVESEN 456
+ F++ I F HCRP++ +D + GKY+ +++ A D NQ P+AFA + +
Sbjct: 362 RGLFWAFSQSIQGFQHCRPLIVVDTKNLGGKYKMKLMIASAFDATNQYFPLAFAVTKEVS 421
Query: 457 TESWYWFLERVHIAVVRMRPNVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDVRSRWC 516
+SW WFL R+ V + R +CLI +L I+ + W E P R+C
Sbjct: 422 VDSWRWFLTRIREKVTQ-RQGICLISSPDPDILAVINEPGSQWKE-------PWAYHRFC 473
Query: 517 MRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEQSRRPLVEGD 576
+ H+ + +LC+ + +N + +DE + E+ + E
Sbjct: 474 LYHLCS----------------KLCSVSPGFDYN-MHFLVDEAGSSSQKEEFDSYMKE-- 514
Query: 577 EPPIPLGALHDDPPTMRRRSGSSIRNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEV 636
++ R+ + + W++ P +W+L D DG RYGIM + +
Sbjct: 515 ---------------IKERNPEAWK----WLDQFPPHQWALAHD-DGRRYGIMRIDTEAL 554
Query: 637 YNWVMRGVRVLPLVAIVEFILHGTQAYFRDRYKKIGPSMADNNIVFGNVVTKYMEDKIK- 695
+ V + R + + V + + F + +K ++ ++ G+V T+++ +K++
Sbjct: 555 FA-VCKRFRKVAMAGGVMLLFGQLKDAFAESFK-----LSRGSLKHGDVYTEHVMEKLEE 608
Query: 696 -KARRHRVVAQGTQVHR--YEIMCVDRSRRGIYRKQAVQECVLKADGGCTCSCMKPKLHH 752
+ V T + R Y++ + + + + + TC+C + + +
Sbjct: 609 FETDSDTWVITITPLERDAYQVSMAPKKKTRLMGQSNDSTSGIVQLNDTTCTCGEFQKNK 668
Query: 753 LPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHTWS 787
PC H LA + I+P YV + + E T+S
Sbjct: 669 FPCLHALAVCDELKINPLQYVDDCYTVERYHKTYS 703
>AT2G04865.1 | chr2:1712149-1714599 FORWARD LENGTH=668
Length = 667
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 185/451 (41%), Gaps = 82/451 (18%)
Query: 899 SAV-EGAQLGTFR--PRTSR--EWLRVDPRHVPWLRAAGLLPLCRLVEAAADDRDPAKRW 953
SAV +G + G R TS+ EW ++ P+ + + AG L R+ + D+
Sbjct: 24 SAVWDGQERGALRCHEHTSKLGEW-KLKPKQIELVERAGFGFLRRIPAISLDN------- 75
Query: 954 DADRSLLAALIDRWRPETHTFHLPCGEMAPTLQDVSYXXXXXXXXXXXXXXDGVFGWKED 1013
L++AL++RWR ET+TFH GEM TL+D++ G+ G K
Sbjct: 76 ----PLISALVERWRRETNTFHFTVGEMTVTLEDIALLLGL-----------GIDG-KPV 119
Query: 1014 ITARFEQVMRXXXXXXXXXXXXYSTVGP--SKAWLLQFTADLLHPDADDYSVRRSLEAYL 1071
I + S G +WL ++ DA V R AYL
Sbjct: 120 IGLTYTTCSAVCERYLGKSPASNSASGGMVKLSWLKDNFSEC-PDDASFEEVERRTRAYL 178
Query: 1072 LWLFGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKT 1131
L+L G +F++T G+ V + DA ++WG+A LA YRAL A K+
Sbjct: 179 LYLVGSTIFSTTTGNKVPVMYLPLFEDFDDAG-----TFAWGAAALAFLYRALGNASVKS 233
Query: 1132 DAGAIIAGCPMLLQLWAAERFAIGRPVVDSAPYGVGRSAQWPEDGPTMGTYWCRRGRRYA 1191
+ I GC LLQ W+ IGRP ++ P Q+P W +G++
Sbjct: 234 QS--TICGCLTLLQCWSYYHLNIGRPKLNREPI----HDQFP-----FVLKW--KGKQNG 280
Query: 1192 HVQVRRGYPDFVF---EFDRLQPSDVIWEPYTEEAVAARAP-LGLSSLCTRDQAYWLTIL 1247
R D VF D ++P+DV+W PY + + S L R + ++
Sbjct: 281 PTANR----DVVFYRKALDVMKPTDVVWLPYENMNGGDMSDRMRKSLLLGRSKTMLIS-- 334
Query: 1248 PMVFDIFVEPHCPQRVMRQFGLRQ----------------LAGALWAPRVQQYVDDWVLA 1291
FD E H P R +QF L Q G + +++ + +W +
Sbjct: 335 ---FDK-AERHLPDRCRKQFDLFQDIPADVQRWVRKSRGVDGGVDLSNKMESELSEWEMR 390
Query: 1292 TEEVINELFPHTEENYRDYLRWYLPRTRARV 1322
E ++ + +E DY+RWYL TR V
Sbjct: 391 WENIVPDDVQGVDEA--DYMRWYLGITRKIV 419
>AT2G25010.1 | chr2:10631691-10633547 FORWARD LENGTH=510
Length = 509
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 127/322 (39%), Gaps = 50/322 (15%)
Query: 956 DRSLLAALIDRWRPETHTFHLPCGEMAPTLQDVSYXXXXXXXXXXXXXXDGVFGWKEDIT 1015
+ SL++AL++RWR ET+TFHLP GEM TL +V+ D + G K
Sbjct: 72 NNSLISALVERWRRETNTFHLPLGEMTITLDEVALVLGLEIDG------DPIVGSKVGDE 125
Query: 1016 ARFEQVMRXXXXXXXXXXXXYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEAYLLWLF 1075
+ R + WL + T DA V+ AYLL+L
Sbjct: 126 VAMDMCGRLLGKLPSAANKEVNCSRVKLNWL-KRTFSECPEDASFDVVKCHTRAYLLYLI 184
Query: 1076 GWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAGA 1135
G +F +T G V + + A +++WG+A LA YRAL A K+ +
Sbjct: 185 GSTIFATTDGDKVSVKYLPLFEDFDQAG-----RYAWGAAALACLYRALGNASLKSQSN- 238
Query: 1136 IIAGCPMLLQLWAAERFAIGRPVVDSAPYGVGRSAQWPEDGPTMGTYWCRRGRRYAHVQV 1195
I GC LLQ W+ IGRP A + + W +G R
Sbjct: 239 -ICGCLTLLQCWSYFHLDIGRPEKSEACF-------------PLALLWKGKGSRS----- 279
Query: 1196 RRGYPDFVFEFDRLQPSDVIWEPYTE------EAVAARAPLGLSSLCTRDQAYWLTILPM 1249
+ ++ E D L PS + W PY + A+ LG S +
Sbjct: 280 KTDLSEYRRELDDLDPSKITWCPYERFENLIPPHIKAKLILGRSK------------TTL 327
Query: 1250 VFDIFVEPHCPQRVMRQFGLRQ 1271
V +E H P R +RQFG RQ
Sbjct: 328 VCFEKIELHFPDRCLRQFGKRQ 349
>AT1G17930.1 | chr1:6166638-6168432 REVERSE LENGTH=479
Length = 478
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 153/376 (40%), Gaps = 63/376 (16%)
Query: 956 DRSLLAALIDRWRPETHTFHLPCGEMAPTLQDVSYXXXXXXXXXXXXXXDG--VFGWKED 1013
+ SL++AL++RWR ET+TFH PCGEM TL +VS DG V G KE
Sbjct: 63 NNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAV--------DGKPVVGVKEK 114
Query: 1014 ITARFEQVMRXXXXXXXXXXXXYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEAYLLW 1073
+ +R S + WL + A+ A + AYL++
Sbjct: 115 DEDPSQVCLRLLGKLPKGE---LSGNRVTAKWLKESFAEC-PKGATMKEIEYHTRAYLIY 170
Query: 1074 LFGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDA 1133
+ G +F +T + V Y D + +++WG+A LA YR + A ++ +
Sbjct: 171 IVGSTIFATTDPSKIS---VDYLILFEDFEK--AGEYAWGAAALAFLYRQIGNASQRSQS 225
Query: 1134 GAIIAGCPMLLQLWAAERFAIGRPVVDSAPYGVGRSAQWPEDGPTMGTYWCRRGRRYAHV 1193
II GC LLQ W+ I RP + Q+P + W +GR+
Sbjct: 226 --IIGGCLTLLQCWSYFHLNIDRPK--------RTTRQFP-----LALLW--KGRQ---- 264
Query: 1194 QVRRGYPDFVFE--FDRLQPSDVIWEPYTEEAVAARAPLGLSSLCTRDQAYWLTILPMVF 1251
Q R F + D L PS+V W P+ + + L R + I P V
Sbjct: 265 QSRSKNDLFKYRKALDDLDPSNVSWCPFEGDLDIVPQSFKDNLLLGRSRTK--LIGPKV- 321
Query: 1252 DIFVEPHCPQRVMRQFGLRQLAGALWAPRVQQYVDD-------------WVLATEEVINE 1298
VE H P R M+QFGL Q+ PR + D W+ E ++
Sbjct: 322 ---VEWHFPDRCMKQFGLCQVIPGEVPPRKNEKNHDEDLLEDMNTADEEWMRRRENIVEN 378
Query: 1299 LFPHTEENYRDYLRWY 1314
+ +E+ +Y++W+
Sbjct: 379 GGGNGDES--EYMQWF 392
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 42,581,160
Number of extensions: 1829381
Number of successful extensions: 4511
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 4508
Number of HSP's successfully gapped: 11
Length of query: 1972
Length of database: 11,106,569
Length adjustment: 113
Effective length of query: 1859
Effective length of database: 8,008,561
Effective search space: 14887914899
Effective search space used: 14887914899
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 119 (50.4 bits)