BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0553200 Os09g0553200|AK065780
         (469 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17310.2  | chr5:5696955-5700845 REVERSE LENGTH=471            778   0.0  
AT3G03250.1  | chr3:749761-754014 REVERSE LENGTH=470              767   0.0  

>AT5G17310.2 | chr5:5696955-5700845 REVERSE LENGTH=471
          Length = 470

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/470 (80%), Positives = 415/470 (88%), Gaps = 1/470 (0%)

Query: 1   MAVTADVKLEGLRAATDKLDQISENEKSGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVP 60
           MA TA  KL  L++A D L ++SENEKSGFI+LVSRYLSGEA+ IEWSKIQTPTDE+VVP
Sbjct: 1   MAATATEKLPQLKSAVDGLTEMSENEKSGFINLVSRYLSGEAQHIEWSKIQTPTDEIVVP 60

Query: 61  YDTLSAAPEDLNEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGFTFLDLIVIQIE 120
           YD ++   ED +E                    MGCTGPKSVIEVR+G TFLDLIVIQIE
Sbjct: 61  YDKMANVSEDASETKYLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIE 120

Query: 121 SLNKKYGCNVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSK 180
           +LN KY C VPL+LMNSFNTHDDTQKIVEKY+ SN++IHTFNQS+YPR+V ++F+P PSK
Sbjct: 121 NLNNKYNCKVPLVLMNSFNTHDDTQKIVEKYTKSNVDIHTFNQSKYPRVVADEFVPWPSK 180

Query: 181 GKTGKDGWYPPGHGDVFPSLNNSGKLDTLLAQGKEYVFVANSDNLGAIVDIKILNHLIHN 240
           GKT KDGWYPPGHGDVFPSL NSGKLD  L+QGKEYVF+ANSDNLGAIVD+KIL HLI N
Sbjct: 181 GKTDKDGWYPPGHGDVFPSLMNSGKLDAFLSQGKEYVFIANSDNLGAIVDLKILKHLIQN 240

Query: 241 QNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWV 300
           +NEYCMEVTPKTLADVKGGTLISYEG+VQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWV
Sbjct: 241 KNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWV 300

Query: 301 NLKAIKRLVEAEALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAIGINVPRSRFLPV 360
           NLKAIK+LVEA+ALKMEIIPNPKEVDGVKVLQLETAAGAAIRFF+ AIG+NVPRSRFLPV
Sbjct: 301 NLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPV 360

Query: 361 KATSDLLLVQSDLYTLVDGFVIRNPARTNPSNPSIELGPEFKKVANFLARFKSIPSIVEL 420
           KATSDLLLVQSDLYTLVDGFV RN ARTNP+NP+IELGPEFKKVA+FL+RFKSIPSIVEL
Sbjct: 361 KATSDLLLVQSDLYTLVDGFVTRNKARTNPTNPAIELGPEFKKVASFLSRFKSIPSIVEL 420

Query: 421 DTLKVSGDVWFGSGVTLKGKVTITAKSG-KLEIPDGAVLENKDINGPEDL 469
           D+LKVSGDVWFGSGV LKGKVT+ A +G KLEIPD AVLENKDINGPEDL
Sbjct: 421 DSLKVSGDVWFGSGVVLKGKVTVKANAGTKLEIPDNAVLENKDINGPEDL 470



>AT3G03250.1 | chr3:749761-754014 REVERSE LENGTH=470
          Length = 469

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/470 (79%), Positives = 414/470 (88%), Gaps = 2/470 (0%)

Query: 1   MAVTADVKLEGLRAATDKLDQISENEKSGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVP 60
           MA T +  L  L++A D L ++SE+EKSGFISLVSRYLSGEA+ IEWSKIQTPTDE+VVP
Sbjct: 1   MAATTE-NLPQLKSAVDGLTEMSESEKSGFISLVSRYLSGEAQHIEWSKIQTPTDEIVVP 59

Query: 61  YDTLSAAPEDLNEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGFTFLDLIVIQIE 120
           Y+ ++   +D+ E                    MGCTGPKSVIEVR+G TFLDLIVIQIE
Sbjct: 60  YEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIE 119

Query: 121 SLNKKYGCNVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSK 180
           +LN KYGC VPL+LMNSFNTHDDT KIVEKY+NSN++IHTFNQS+YPR+V ++F+P PSK
Sbjct: 120 NLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWPSK 179

Query: 181 GKTGKDGWYPPGHGDVFPSLNNSGKLDTLLAQGKEYVFVANSDNLGAIVDIKILNHLIHN 240
           GKT K+GWYPPGHGDVFP+L NSGKLDT L+QGKEYVFVANSDNLGAIVD+ IL HLI N
Sbjct: 180 GKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKHLIQN 239

Query: 241 QNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWV 300
           +NEYCMEVTPKTLADVKGGTLISYEG+VQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWV
Sbjct: 240 KNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWV 299

Query: 301 NLKAIKRLVEAEALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAIGINVPRSRFLPV 360
           NLKAIK+LVEA+ALKMEIIPNPKEVDGVKVLQLETAAGAAIRFF+ AIG+NVPRSRFLPV
Sbjct: 300 NLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPV 359

Query: 361 KATSDLLLVQSDLYTLVDGFVIRNPARTNPSNPSIELGPEFKKVANFLARFKSIPSIVEL 420
           KA+SDLLLVQSDLYTLVDGFV RN ARTNPSNPSIELGPEFKKVA FL+RFKSIPSIVEL
Sbjct: 360 KASSDLLLVQSDLYTLVDGFVTRNKARTNPSNPSIELGPEFKKVATFLSRFKSIPSIVEL 419

Query: 421 DTLKVSGDVWFGSGVTLKGKVTITAKSG-KLEIPDGAVLENKDINGPEDL 469
           D+LKVSGDVWFGS + LKGKVT+ AKSG KLEIPD AV+ENK+INGPEDL
Sbjct: 420 DSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNINGPEDL 469



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.135    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,018,832
Number of extensions: 424694
Number of successful extensions: 732
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 728
Number of HSP's successfully gapped: 2
Length of query: 469
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 367
Effective length of database: 8,310,137
Effective search space: 3049820279
Effective search space used: 3049820279
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)