BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0551600 Os09g0551600|AK066658
(127 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51880.2 | chr3:19247241-19248491 REVERSE LENGTH=186 133 2e-32
AT1G20693.1 | chr1:7177282-7178487 FORWARD LENGTH=145 125 4e-30
AT2G17560.1 | chr2:7642486-7643468 REVERSE LENGTH=139 122 4e-29
AT1G20696.2 | chr1:7179825-7181193 FORWARD LENGTH=148 114 9e-27
AT4G35570.1 | chr4:16887363-16888184 REVERSE LENGTH=126 102 5e-23
AT5G23420.1 | chr5:7888712-7890111 REVERSE LENGTH=242 72 9e-14
AT2G34450.2 | chr2:14527918-14529448 REVERSE LENGTH=153 69 5e-13
AT4G23800.1 | chr4:12390228-12392516 FORWARD LENGTH=457 57 2e-09
AT4G11080.1 | chr4:6760898-6763272 REVERSE LENGTH=447 55 9e-09
AT3G28730.1 | chr3:10784954-10788498 FORWARD LENGTH=647 48 1e-06
>AT3G51880.2 | chr3:19247241-19248491 REVERSE LENGTH=186
Length = 185
Score = 133 bits (335), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 88/114 (77%), Gaps = 3/114 (2%)
Query: 13 RLSVRKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTD 72
R + ++ KA+KDPNKPKR PSAFFVF+E FR +K+++PNVK VS +GKAGG KWKSM+
Sbjct: 38 RETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQ 97
Query: 73 ADKAPFVTKAEKLKAEYTKKIDAYNNKQAGGPATSGDSDKSKSEVNDEDEGSGD 126
A+KAP+ KA K KAEY K++DAYN G S +S+KS+SE+NDEDE SG+
Sbjct: 98 AEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG---SDESEKSRSEINDEDEASGE 148
>AT1G20693.1 | chr1:7177282-7178487 FORWARD LENGTH=145
Length = 144
Score = 125 bits (315), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 85/125 (68%), Gaps = 9/125 (7%)
Query: 3 ARSRSSNGDSRLSV---------RKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNV 53
A+S++ S+LSV R A KDPNKPKRP SAFFVFME FR+ +K+++P
Sbjct: 4 AKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKN 63
Query: 54 KQVSVIGKAGGDKWKSMTDADKAPFVTKAEKLKAEYTKKIDAYNNKQAGGPATSGDSDKS 113
K V+ +GKA GDKWKS++D++KAP+V KAEK K EY K I AYN K GP +SDKS
Sbjct: 64 KSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKS 123
Query: 114 KSEVN 118
SEVN
Sbjct: 124 VSEVN 128
>AT2G17560.1 | chr2:7642486-7643468 REVERSE LENGTH=139
Length = 138
Score = 122 bits (306), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 84/122 (68%), Gaps = 5/122 (4%)
Query: 3 ARSRSSNGDSRLSVRKTKA----EKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSV 58
+++ +++ D RL R KA +KDPN+PKRPPSAFFVF+E FRK++ +PN K V+
Sbjct: 6 SKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVAT 65
Query: 59 IGKAGGDKWKSMTDADKAPFVTKAEKLKAEYTKKIDAYNNKQAGGP-ATSGDSDKSKSEV 117
+GKA G +WK+MTD DKAP+V KAE K EY K + YN K A G DSDKSKSEV
Sbjct: 66 VGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKSKSEV 125
Query: 118 ND 119
++
Sbjct: 126 DE 127
>AT1G20696.2 | chr1:7179825-7181193 FORWARD LENGTH=148
Length = 147
Score = 114 bits (286), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 75/103 (72%), Gaps = 6/103 (5%)
Query: 3 ARSRSSNGDSRLSVRKTKAE------KDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQV 56
A+S++ ++LSV K A+ KDPNKPKRP SAFFVFME FR YKE+HP K V
Sbjct: 4 AKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSV 63
Query: 57 SVIGKAGGDKWKSMTDADKAPFVTKAEKLKAEYTKKIDAYNNK 99
+ +GKAGG+KWKS++D++KAP+V KA+K K EY K + AYN K
Sbjct: 64 AAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKK 106
>AT4G35570.1 | chr4:16887363-16888184 REVERSE LENGTH=126
Length = 125
Score = 102 bits (254), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 76/118 (64%), Gaps = 5/118 (4%)
Query: 5 SRSSNGDSRLSVRKTKA---EKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGK 61
SRS+ D RL VR K KDPN+PK+PPS FFVF++ FRK++ +P+ K V +G+
Sbjct: 10 SRST--DDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGR 67
Query: 62 AGGDKWKSMTDADKAPFVTKAEKLKAEYTKKIDAYNNKQAGGPATSGDSDKSKSEVND 119
A G KWK+MT+ ++APFV K++ K EY + YN + A G T+GD +K + +D
Sbjct: 68 AAGKKWKTMTEEERAPFVAKSQSKKTEYAVTMQQYNMELANGNKTTGDDEKQEKAADD 125
>AT5G23420.1 | chr5:7888712-7890111 REVERSE LENGTH=242
Length = 241
Score = 71.6 bits (174), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 20 KAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDADKAPFV 79
K+ NKPKRP +AFF+FM FRK +K +H N K GG+KWKS+T+ +K ++
Sbjct: 107 KSSSTSNKPKRPLTAFFIFMSDFRKTFKSEH-NGSLAKDAAKIGGEKWKSLTEEEKKVYL 165
Query: 80 TKAEKLKAEYTKKI 93
KA +LKAEY K +
Sbjct: 166 DKAAELKAEYNKSL 179
>AT2G34450.2 | chr2:14527918-14529448 REVERSE LENGTH=153
Length = 152
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 28 PKRPPSAFFVFMEQFRKDYKEKHPNVKQV-SVIGKAGGDKWKSMTDADKAPFVTKAEKLK 86
PK+P +AFF F++ FRK Y+E++P+VK + VIGK G+KWK+MT +K + A + +
Sbjct: 63 PKKPATAFFFFLDDFRKQYQEENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKR 122
Query: 87 AEYTKKIDAYNNKQAGGPATSGDSDKSKSE 116
E+ + + Y + G ++D SE
Sbjct: 123 EEFHRAMTEYTKRMESGAHDESETDSDYSE 152
>AT4G23800.1 | chr4:12390228-12392516 FORWARD LENGTH=457
Length = 456
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 24 DPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDADKAPFVTKAE 83
DPNKPK+P S++F+F + RK E+ P +V KWK +++ +K + KA
Sbjct: 375 DPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISL-KWKELSEEEKQVYNGKAA 433
Query: 84 KLKAEYTKKIDAYNNKQAGGPAT 106
KL Y K+++AYN K A ++
Sbjct: 434 KLMEAYKKEVEAYNKKSAATTSS 456
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 24 DPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDADKAPFVTKAE 83
DP KPK P SAF V+ + R +E++ K V + K G++WK+++D KAP+ A+
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREEN---KSVVEVAKITGEEWKNLSDKKKAPYEKVAK 307
Query: 84 KLKAEYTKKIDAY 96
K K Y + ++ Y
Sbjct: 308 KNKETYLQAMEEY 320
>AT4G11080.1 | chr4:6760898-6763272 REVERSE LENGTH=447
Length = 446
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 24 DPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDADKAPFVTKAE 83
DPNKPK+P S++F+F + RK E+HP + +V KW + + +K + +KA
Sbjct: 368 DPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHISL-KWMELGEEEKQVYNSKAA 426
Query: 84 KLKAEYTKKIDAYN 97
+L Y K+++ YN
Sbjct: 427 ELMEAYKKEVEEYN 440
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 24 DPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDADKAPFVTKAE 83
DP KPK+P SA+ ++ + R K ++ +V +V K G++WK++++ KAP+ A+
Sbjct: 242 DPLKPKQPISAYLIYANERRAALKGENKSVIEV---AKMAGEEWKNLSEEKKAPYDQMAK 298
Query: 84 KLKAEYTKKIDAY 96
K K Y ++++ Y
Sbjct: 299 KNKEIYLQEMEGY 311
>AT3G28730.1 | chr3:10784954-10788498 FORWARD LENGTH=647
Length = 646
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 30 RPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDADKAPFVTKAEKLKAEY 89
R S F F + R + K++HP + +GK GDKW+ M+ DK P+ KA+ K Y
Sbjct: 564 RAMSGFMFFSQMERDNIKKEHPGIA-FGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRY 622
Query: 90 TKKIDAYNNKQAGGPATSGDSD 111
+I Y N Q + DSD
Sbjct: 623 KDEISDYKNPQPMNVDSGNDSD 644
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.304 0.123 0.342
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,090,765
Number of extensions: 125510
Number of successful extensions: 459
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 452
Number of HSP's successfully gapped: 12
Length of query: 127
Length of database: 11,106,569
Length adjustment: 87
Effective length of query: 40
Effective length of database: 8,721,377
Effective search space: 348855080
Effective search space used: 348855080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 105 (45.1 bits)