BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0550000 Os09g0550000|AK067716
(567 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G20670.1 | chr1:7164537-7167933 REVERSE LENGTH=653 291 6e-79
AT1G76380.2 | chr1:28651416-28654536 REVERSE LENGTH=581 270 2e-72
AT5G55040.1 | chr5:22327727-22331703 REVERSE LENGTH=917 246 2e-65
AT3G01770.1 | chr3:275582-278386 REVERSE LENGTH=621 67 3e-11
AT5G63320.1 | chr5:25374413-25378783 REVERSE LENGTH=1062 66 4e-11
AT1G32750.1 | chr1:11846385-11856261 REVERSE LENGTH=1920 65 7e-11
AT5G46550.1 | chr5:18884439-18886503 REVERSE LENGTH=495 65 8e-11
AT3G54610.1 | chr3:20213593-20217375 FORWARD LENGTH=569 65 9e-11
AT5G14270.2 | chr5:4605173-4608517 FORWARD LENGTH=690 62 7e-10
AT1G73150.1 | chr1:27504327-27505996 REVERSE LENGTH=462 61 2e-09
AT1G17790.1 | chr1:6125532-6127276 REVERSE LENGTH=488 61 2e-09
AT3G27260.1 | chr3:10068411-10072403 FORWARD LENGTH=814 59 6e-09
AT1G06230.1 | chr1:1907626-1910183 FORWARD LENGTH=767 59 8e-09
AT3G19040.1 | chr3:6567157-6575282 REVERSE LENGTH=1787 57 3e-08
AT2G34900.1 | chr2:14723333-14725562 REVERSE LENGTH=387 55 7e-08
AT1G58025.2 | chr1:21457755-21461757 REVERSE LENGTH=583 55 1e-07
AT5G65630.1 | chr5:26226311-26228257 REVERSE LENGTH=591 55 1e-07
AT5G10550.1 | chr5:3332855-3335232 REVERSE LENGTH=679 54 2e-07
AT1G05910.1 | chr1:1790796-1796503 FORWARD LENGTH=1211 52 7e-07
>AT1G20670.1 | chr1:7164537-7167933 REVERSE LENGTH=653
Length = 652
Score = 291 bits (745), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 167/344 (48%), Positives = 216/344 (62%), Gaps = 19/344 (5%)
Query: 94 GEKTRKATDGSE-EPSDSGPTTPLPDKKLLVFVLDRLQKKDTYGVFSDPVDPEELPDYHD 152
GEK KATD + P +SGPTTPLPDKKLL+F+LDRLQKKDTYGV+SDPVDPEELPDY +
Sbjct: 151 GEKASKATDILQGSPVESGPTTPLPDKKLLLFILDRLQKKDTYGVYSDPVDPEELPDYFE 210
Query: 153 IIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFLLTSNAMCYNSPDTIYYRQARAIQELAKK 212
IIK+PMDFST+R KL+ GAY LEQFE DVFL+ +NAM YNS DT+YYRQARAIQELAKK
Sbjct: 211 IIKNPMDFSTLRNKLDSGAYSTLEQFERDVFLICTNAMEYNSADTVYYRQARAIQELAKK 270
Query: 213 DFENLRQDSDASXXXXXXXXXXXXXXXXXXRRGRPPNKNTIKQKVGKPPVERATADFSGA 272
DFENLRQDSD RRGRPP K+ ++R ++ S
Sbjct: 271 DFENLRQDSD---DEEPQSQQQQQQQPKVARRGRPPKKHPEPSS-----IDRTASEISAD 322
Query: 273 TLASVGNNGHRTQPPFDLQRQVMNGSF--IADVLRASFASRNNGYNWSNERKLERIEDYS 330
L G++ ++ ++L++ + F +R + S WS + + E +
Sbjct: 323 ALIP-GDSSNKFSGAYNLRKAPPSYKFRQAESSVRINHNSETQS-GWSVDWESE----FP 376
Query: 331 GSIGKWSAKSGRKPILTEESSRSTYCQPQPSSSIYELPVSSSYNETRKLLVPVGVQLQQS 390
S+ K K G K +++ R TY S+S E V ++ + K L+PVG+ ++
Sbjct: 377 SSVVKAVNKYGMKHFNVDDNRRDTYN--HLSTSTQEPSVLTTLEDELKQLIPVGLNMEYG 434
Query: 391 YPRSLARFAAQLGPVAWEIASKRIERALPPGTKFGRGWVGDGEA 434
Y +SLAR+AA LGPVAW+IAS+RIE LP G KFG+GWVG+ A
Sbjct: 435 YAKSLARYAANLGPVAWKIASRRIETVLPSGIKFGQGWVGENPA 478
>AT1G76380.2 | chr1:28651416-28654536 REVERSE LENGTH=581
Length = 580
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 218/357 (61%), Gaps = 24/357 (6%)
Query: 89 DGSAK-GEKTRKATDGSEEPSDSGPTTPLPDKKLLVFVLDRLQKKDTYGVFSDPVDPEEL 147
DGS GEK KATD + +TPLPDKKLL F+LDR+QKKDTYGV+SDP DPEEL
Sbjct: 116 DGSDNTGEKASKATDILLQRGSLVESTPLPDKKLLFFILDRVQKKDTYGVYSDPADPEEL 175
Query: 148 PDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFLLTSNAMCYNSPDTIYYRQARAIQ 207
PDY++IIK+PMDF+T+RKKL GAY LEQFE DVFL+ +NAM YNS DT+YYRQARA+
Sbjct: 176 PDYYEIIKNPMDFTTLRKKLESGAYTTLEQFEQDVFLICTNAMEYNSADTVYYRQARAML 235
Query: 208 ELAKKDFENLRQDSDASXXXXXXXXXXXXXXXXXXRRGRPPNKNTIKQKVGKPPVERATA 267
ELAKKDF NLRQ+SD +RGRPP +K+++ + ++R T+
Sbjct: 236 ELAKKDFGNLRQESDGE------EPVSLSQQPKVVKRGRPPGSG-LKKQLEQSLIDRTTS 288
Query: 268 DFSG-ATLASVGNNGHRTQPPFDLQRQVMNGSFIADVLRASFASRNNGYNWSNERKL--E 324
D S A + + R ++L++ + F R + S +N N+ L +
Sbjct: 289 DISADAAAFTYAGDSSRLSGSYNLRKNPPSYGF-----RHAETSVRINHNSENQSGLLID 343
Query: 325 RIEDYSGSIGKWSAKSGRKPILTEESSRSTYCQPQPSSSIYELPVSSSYNETRKLLVPVG 384
+++ S+ K K G K + +E+ R TY Q S+S+ + + + ++ K L PVG
Sbjct: 344 WEKEFPPSVVKAVNKYGMKNV--DENRRDTYN--QNSASLQDSSIFTLLDDNLKQLTPVG 399
Query: 385 VQLQQSYPRSLARFAAQLGPVAWEIASKRIERALPPGTKFGRGWVGDGEAPNATQPP 441
++ + Y RSLAR+AA +GPVAW A+ RIE+ LP GT+FG GWVG+ N PP
Sbjct: 400 LKAEYGYARSLARYAANIGPVAWTFANVRIEKLLPTGTEFGPGWVGE----NPENPP 452
>AT5G55040.1 | chr5:22327727-22331703 REVERSE LENGTH=917
Length = 916
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 197/356 (55%), Gaps = 36/356 (10%)
Query: 86 GLPDGSAKGEKTRKATDGSEEPSD-SGPTTPLPDKKLLVFVLDRLQKKDTYGVFSDPVDP 144
G D + +K RK S D S TTP+ DKK L +LD+LQKKD YGV+++PVDP
Sbjct: 154 GHADSEEEDDKERKRRSASGNQCDHSSETTPILDKKSLELILDKLQKKDIYGVYAEPVDP 213
Query: 145 EELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFLLTSNAMCYNSPDTIYYRQAR 204
EELPDYHD+I+HPMDFST+RKKL G+Y LE+ E DV L+ SNAM YNS DT+YY+QAR
Sbjct: 214 EELPDYHDMIEHPMDFSTVRKKLANGSYSTLEELESDVLLICSNAMQYNSSDTVYYKQAR 273
Query: 205 AIQELAKKDFENLRQDSDASXXXXXXXXXXXXXXXXXXRRGRPPN--KNTIKQKVGKPPV 262
IQE+ K+ FE R + +P + K ++Q + +
Sbjct: 274 TIQEMGKRKFEKAR-----------LKIKRAEKELKTDEKVKPDSSVKKQVRQPFSRNGL 322
Query: 263 ERATADF-SGATLASVGNNGHRTQPPFDLQRQVMNGSFIADVLRASFASRNNGYNWSNER 321
E +DF SGA LAS G + + P Q DVL N S
Sbjct: 323 EAVGSDFSSGANLASGGASQNE---PVSTQIGGHEKHSYTDVLFEG--------NTSLVD 371
Query: 322 KLERIEDYSGSIGKWSAKSGRKPILTEESSRSTY----CQPQPSSSIYELPVSSSYNETR 377
LE+ ED S G + K GRK + EE R+TY Q S SI+ +++
Sbjct: 372 SLEKAEDLSSGKGLF-GKCGRKLSVVEEDRRATYEDSDQQGDRSESIF-----TTFESEI 425
Query: 378 KLLVPVGVQLQQSYPRSLARFAAQLGPVAWEIASKRIERALPPGTKFGRGWVGDGE 433
K V VG+ + +Y RSLARFAA LGPVAW+IAS+RIE+ALP KFGRGWVG+ E
Sbjct: 426 KQFVAVGLHAEHAYGRSLARFAATLGPVAWKIASQRIEQALPADFKFGRGWVGEYE 481
>AT3G01770.1 | chr3:275582-278386 REVERSE LENGTH=621
Length = 620
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 125 VLDRLQKKDTYGVFSDPVDPEEL--PDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDV 182
+L RL + +F+ PVD +L PDY IIKHPMD T++ KL G Y + +F DV
Sbjct: 136 LLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADV 195
Query: 183 FLLTSNAMCYNSPDTIYYRQARAIQEL 209
L NAM YN D YR A + +
Sbjct: 196 RLTFRNAMTYNPSDNNVYRFADTLSKF 222
>AT5G63320.1 | chr5:25374413-25378783 REVERSE LENGTH=1062
Length = 1061
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 125 VLDRLQKKDTYGVFSDPVDPEEL--PDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDV 182
+L+RL + F PVDP L PDY ++IKHPMD TIR +L KG Y + F DV
Sbjct: 168 LLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADV 227
Query: 183 FLLTSNAMCYNSPDTIYYRQARAI 206
L SN++ YN P ++ A+ I
Sbjct: 228 RLTFSNSIAYNPPGNQFHTMAQGI 251
>AT1G32750.1 | chr1:11846385-11856261 REVERSE LENGTH=1920
Length = 1919
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 121 LLVFVLDRLQ-KKDTYGVFSDPVDPEELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFE 179
+L ++D L+ K++ +F PV +E PDY DI+++PMD STIR K+ K Y N EQF
Sbjct: 1806 ILERIVDTLRLKEEVSRLFLKPVSKKEAPDYLDIVENPMDLSTIRDKVRKIEYRNREQFR 1865
Query: 180 DDVFLLTSNAMCYN 193
DV+ + NA YN
Sbjct: 1866 HDVWQIKYNAHLYN 1879
>AT5G46550.1 | chr5:18884439-18886503 REVERSE LENGTH=495
Length = 494
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 137 VFSDPVDP--EELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFLLTSNAMCYNS 194
+F +PVDP E+PDY ++I+ PMD T++ KL K Y N ++F DV L +NAM YN
Sbjct: 88 LFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNP 147
Query: 195 PDTIYYRQARAIQELAKKDFENL 217
+ A+ I E+ + +E+L
Sbjct: 148 LWNEVHTIAKEINEIFEVRWESL 170
>AT3G54610.1 | chr3:20213593-20217375 FORWARD LENGTH=569
Length = 568
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 138 FSDPVDPEELPDYHDIIKHPMDFSTIRKKL-NKGAYGNLEQFEDDVFLLTSNAMCYNSPD 196
F +PVD ++PDY+DIIK P+D I K++ ++ Y L+ F D + +N YNSPD
Sbjct: 480 FKEPVDSRDVPDYYDIIKDPIDLKVIAKRVESEQYYVTLDMFVADARRMFNNCRTYNSPD 539
Query: 197 TIYYRQARAIQ 207
TIYY+ A ++
Sbjct: 540 TIYYKCATRLE 550
>AT5G14270.2 | chr5:4605173-4608517 FORWARD LENGTH=690
Length = 689
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 125 VLDRLQKKDTYGVFSDPVDPEELP--DYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDV 182
+L RL VF+ PVD +L DY ++I+HPMD T++ KL G Y +F DV
Sbjct: 144 LLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADV 203
Query: 183 FLLTSNAMCYNSPDTIYYRQARAIQELAKKDFENLRQ 219
L SNAM YN P Y A +++ + ++ L +
Sbjct: 204 RLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEK 240
>AT1G73150.1 | chr1:27504327-27505996 REVERSE LENGTH=462
Length = 461
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 125 VLDRLQKKDTYGVFSDPVDPEEL--PDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDV 182
+L +L K + +F+ PVD L DYH+IIK PMD T++ +L+K Y + +F +DV
Sbjct: 126 LLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEFAEDV 185
Query: 183 FLLTSNAMCYNSPDTIYYRQARAIQELAKKDF 214
L +NAM YN Y A + L ++ +
Sbjct: 186 RLTFNNAMLYNPVGHDVYHMAEILLNLFEEKW 217
>AT1G17790.1 | chr1:6125532-6127276 REVERSE LENGTH=488
Length = 487
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 125 VLDRLQKKDTYGVFSDPVDPEEL--PDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDV 182
+L +L K + VF+ PVD + L DYH+I+K PMD T++ KL K Y + F +DV
Sbjct: 139 LLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLDFAEDV 198
Query: 183 FLLTSNAMCYNSPDTIYYRQARAIQELAKKDFENLRQDSD 222
L +NA+ YN YR A + + + + ++ D
Sbjct: 199 RLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSIEMQYD 238
>AT3G27260.1 | chr3:10068411-10072403 FORWARD LENGTH=814
Length = 813
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 137 VFSDPVDPEEL--PDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFLLTSNAMCYNS 194
VF PVD +L PDY IKHPMD T++K L G Y + +F DV L +NAM YN
Sbjct: 195 VFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADVRLTFTNAMTYNP 254
Query: 195 P 195
P
Sbjct: 255 P 255
>AT1G06230.1 | chr1:1907626-1910183 FORWARD LENGTH=767
Length = 766
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 125 VLDRLQKKDTYGVFSDPVDPEEL--PDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDV 182
+L+RL K VF+ PVD + L DY+ II+HPMD TI+ L K Y + +F +DV
Sbjct: 428 LLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPREFAEDV 487
Query: 183 FLLTSNAMCYN 193
L NAM YN
Sbjct: 488 RLTFHNAMTYN 498
>AT3G19040.1 | chr3:6567157-6575282 REVERSE LENGTH=1787
Length = 1786
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 121 LLVFVLDRLQKKDT--YGVFSDPVDPEELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQF 178
+L ++D L+ K+ +F PV +E P+Y +I+K PMD STIR K+ + Y + +QF
Sbjct: 1668 ILESIVDTLRVKEVNVSYLFLKPVTKKEAPNYLEIVKCPMDLSTIRDKVRRMEYRDRQQF 1727
Query: 179 EDDVFLLTSNAMCYN 193
DV+ + NA YN
Sbjct: 1728 RHDVWQIKFNAHLYN 1742
>AT2G34900.1 | chr2:14723333-14725562 REVERSE LENGTH=387
Length = 386
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 138 FSDPVDPEEL--PDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFLLTSNAMCYNSP 195
F +PVD + L DY+ +I+ PMD TI+KK+ Y N+ + DV L+ NAM YN
Sbjct: 130 FLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEE 189
Query: 196 DTIYYRQARAIQE 208
Y A ++ E
Sbjct: 190 KEDVYVMAESLLE 202
>AT1G58025.2 | chr1:21457755-21461757 REVERSE LENGTH=583
Length = 582
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 123 VFVLDRLQKKDTYGVFSDPVDPEEL--PDYHDIIKHPMDFSTIRKKLNKG-AYGNLEQFE 179
+ V+ ++ K + F+ PV+PE L PDY DIIK PMDF TI KG Y N E
Sbjct: 220 LIVIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEKGNKYMNSEDVY 279
Query: 180 DDVFLLTSNAMCYN 193
DV + +N YN
Sbjct: 280 KDVNYIWNNCSKYN 293
>AT5G65630.1 | chr5:26226311-26228257 REVERSE LENGTH=591
Length = 590
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 111 GPTTPLPDKKLLVF------VLDRLQKKDTYGVFSDPVDPEEL--PDYHDIIKHPMDFST 162
GP+ P +K L +L +L K VF+ PVD L DYH ++K PMD T
Sbjct: 156 GPSDPESEKLLAGMLNTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGT 215
Query: 163 IRKKLNKGAYGNLEQFEDDVFLLTSNAMCYN 193
++ L+KG Y + F DV L NAM YN
Sbjct: 216 VKLNLDKGFYVSPIDFATDVRLTFDNAMTYN 246
>AT5G10550.1 | chr5:3332855-3335232 REVERSE LENGTH=679
Length = 678
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 125 VLDRLQKKDTYGVFSDPVDPEEL--PDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDV 182
+L +L K VF +PVD L DYH I+ PMD T++ L KG Y + F DV
Sbjct: 256 ILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPIDFASDV 315
Query: 183 FLLTSNAMCYNSPDTIYYRQARAI 206
L +NAM YN Y A +
Sbjct: 316 RLTFTNAMSYNPKGQDVYLMAEKL 339
>AT1G05910.1 | chr1:1790796-1796503 FORWARD LENGTH=1211
Length = 1210
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 125 VLDRLQKKDTYGVFSDPVDPEELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFL 184
V +R+ + F PV E+ P+Y II+ PMD +T+ ++++ G Y F DV L
Sbjct: 905 VCNRILYDKRFSAFHFPVTDEDAPNYRSIIQIPMDTATLLQRVDTGQYLTCTPFLQDVDL 964
Query: 185 LTSNAMCYNSPDTIYYRQARAI 206
+ NA YN D Y AR +
Sbjct: 965 IVRNAKAYNGDD---YAGARIV 983
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.129 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,613,994
Number of extensions: 501517
Number of successful extensions: 1078
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 1076
Number of HSP's successfully gapped: 19
Length of query: 567
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 463
Effective length of database: 8,255,305
Effective search space: 3822206215
Effective search space used: 3822206215
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 114 (48.5 bits)