BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0547000 Os09g0547000|AK062728
(141 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G29450.1 | chr1:10305981-10306406 REVERSE LENGTH=142 94 3e-20
AT1G29420.1 | chr1:10301483-10301908 REVERSE LENGTH=142 91 2e-19
AT1G29500.1 | chr1:10321290-10321697 FORWARD LENGTH=136 90 3e-19
AT1G29460.1 | chr1:10307609-10308055 REVERSE LENGTH=149 90 5e-19
AT1G29430.1 | chr1:10302801-10303226 REVERSE LENGTH=142 89 1e-18
AT5G27780.1 | chr5:9838885-9839313 REVERSE LENGTH=143 88 1e-18
AT1G29510.1 | chr1:10322683-10323114 FORWARD LENGTH=144 82 1e-16
AT1G29440.1 | chr1:10304571-10304996 REVERSE LENGTH=142 80 5e-16
AT1G76190.1 | chr1:28592225-28592596 FORWARD LENGTH=124 73 4e-14
AT1G29490.1 | chr1:10319835-10320143 FORWARD LENGTH=103 70 3e-13
AT1G20470.1 | chr1:7094325-7094765 FORWARD LENGTH=147 65 1e-11
AT4G00880.1 | chr4:366692-367060 REVERSE LENGTH=123 59 6e-10
AT3G61900.1 | chr3:22925813-22926379 FORWARD LENGTH=137 59 8e-10
AT3G60690.1 | chr3:22435262-22435774 FORWARD LENGTH=171 56 7e-09
AT2G18010.1 | chr2:7833902-7834240 FORWARD LENGTH=113 52 7e-08
AT1G75580.1 | chr1:28377530-28377856 FORWARD LENGTH=109 52 8e-08
AT2G46690.1 | chr2:19180904-19181269 FORWARD LENGTH=122 52 8e-08
AT5G66260.1 | chr5:26471269-26471658 FORWARD LENGTH=100 51 2e-07
AT2G45210.1 | chr2:18641884-18642372 FORWARD LENGTH=163 50 3e-07
AT5G20810.2 | chr5:7044791-7045363 FORWARD LENGTH=191 49 7e-07
AT5G10990.1 | chr5:3476884-3477330 FORWARD LENGTH=149 49 7e-07
AT4G34760.1 | chr4:16582471-16582794 REVERSE LENGTH=108 49 8e-07
AT1G75590.1 | chr1:28383250-28383714 REVERSE LENGTH=155 47 3e-06
AT1G19840.1 | chr1:6872794-6873255 REVERSE LENGTH=154 46 7e-06
>AT1G29450.1 | chr1:10305981-10306406 REVERSE LENGTH=142
Length = 141
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 76/118 (64%), Gaps = 1/118 (0%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
M++++KL ++ KKWQ+ A+ R+ S S ++ A+KG V+YTTD RF PL
Sbjct: 1 MMNTKKLIKMAKKWQQR-AALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLS 59
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSI 118
YL+ ++F ELL++S+EEFG + IT P D+ +EY++ L++R + EKALL SI
Sbjct: 60 YLSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSI 117
>AT1G29420.1 | chr1:10301483-10301908 REVERSE LENGTH=142
Length = 141
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 78/118 (66%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
M++++KL ++ KKWQ+ A ++ + +T+++ A+KG V+YT+D RF P+
Sbjct: 1 MMNTKKLLKMAKKWQQRAALRRKRISFHRSTDTTSSSTAAEKGCFVVYTSDRIRFAFPIS 60
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSI 118
YL+ ++ ELL++S+EEFG + ITLP D+ +EY++ L++R + EKAL++SI
Sbjct: 61 YLSNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKALITSI 118
>AT1G29500.1 | chr1:10321290-10321697 FORWARD LENGTH=136
Length = 135
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
M++++KL ++ +KWQ+ A+ R+ S + +T +KG V+YT D RF P+
Sbjct: 1 MMNTKKLIKMFRKWQQR-AALHRKRISFQRPSTRSTT--VEKGCFVVYTADNTRFAFPIS 57
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSI 118
YL+ ++F E+L +S+EEFG + ITLP D+ +EY++ LI+R + EKALL SI
Sbjct: 58 YLSNSVFQEILEISEEEFGLPTGGPITLPFDSVFLEYLIKLIKRRMDGDTEKALLMSI 115
>AT1G29460.1 | chr1:10307609-10308055 REVERSE LENGTH=149
Length = 148
Score = 89.7 bits (221), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 7/125 (5%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTA-------SIDGCCSTATAYVADKGHCVLYTTDGA 53
MI+++KL ++ KKWQ+ A ++ + + +T+++ +KG V+YT D
Sbjct: 1 MINTKKLLKMAKKWQQRAALKRKRISFQRSTTTTTTTTTTTSSSTAVEKGCFVVYTVDKI 60
Query: 54 RFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKA 113
RF PL YLN ++F ELL++S+EEFG + ITLP D+ +EY++ I R + EKA
Sbjct: 61 RFAFPLSYLNNSVFEELLKISEEEFGLRAGGPITLPFDSVFLEYLIKFIERRMDGDTEKA 120
Query: 114 LLSSI 118
LL SI
Sbjct: 121 LLMSI 125
>AT1G29430.1 | chr1:10302801-10303226 REVERSE LENGTH=142
Length = 141
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 75/118 (63%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
MI+++KL +L KKWQ+ A ++ + +T++ +KG V+YT D RF PL
Sbjct: 2 MINAKKLMKLAKKWQQRAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSFPLS 61
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSI 118
YL+ I ELL++S+EEFG + ITLP D++ +EY++ LI+R E+ EKALL SI
Sbjct: 62 YLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLSI 119
>AT5G27780.1 | chr5:9838885-9839313 REVERSE LENGTH=143
Length = 142
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 1 MISSRKLAQLGKKWQRMVA-SSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPL 59
MI+++ L +L K WQ+ A R + +T++ +KG V+YT D RF PL
Sbjct: 2 MINAKTLMKLAKTWQQRAALKRKRISFQRSSITTTSSQTTVEKGCFVVYTADKIRFSFPL 61
Query: 60 MYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSI 118
YL+ I ELL++S+EEFG + ITLP D+ +EY++ LI+R E+ EKALL SI
Sbjct: 62 SYLSNTIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDEDTEKALLWSI 120
>AT1G29510.1 | chr1:10322683-10323114 FORWARD LENGTH=144
Length = 143
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 74/118 (62%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
MI+++KL ++ KKWQ+ A ++ + T+++ +KG V+YT D RF P+
Sbjct: 2 MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSI 118
YL+ +I ELL++S+EEFG + ITLP D+ +EY++ LI+R + EKALL SI
Sbjct: 62 YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSI 119
>AT1G29440.1 | chr1:10304571-10304996 REVERSE LENGTH=142
Length = 141
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 76/118 (64%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
MI+++KL ++ KKWQ+ A ++ + T+++ +KG V+YT D RF P+
Sbjct: 1 MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSI 118
YL+ ++ ELL++S+E+FG + ITLP D++ +EY++ LI+R E+ EKALL SI
Sbjct: 61 YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSI 118
>AT1G76190.1 | chr1:28592225-28592596 FORWARD LENGTH=124
Length = 123
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 42 KGHCVLYTTDGARFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCL 101
KGH +YT +G RF +PL YLN + LL+++++EFG + + +PCD S+M++++ L
Sbjct: 23 KGHFAVYTNEGKRFVLPLDYLNHPMLQVLLQMAEDEFGTTIDGPLKVPCDGSLMDHIIML 82
Query: 102 IRRDASEEIEKALLSSIVRPCLNTSVVPPMRLNQQF 137
+RR S + + SS C S+ R Q
Sbjct: 83 VRRSMSHDYDDVEKSSTSSTCKGASISSLFRGQSQL 118
>AT1G29490.1 | chr1:10319835-10320143 FORWARD LENGTH=103
Length = 102
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
M++++KL ++ KKWQ+ A ++ + +T+++ +KG V+YT D RF P+
Sbjct: 1 MMNTKKLMKMAKKWQQRAALRRKRISFQRSNSTTSSSSAVEKGCFVVYTADQVRFAFPIS 60
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDA 92
YL+ ++ ELL++S+EEFG + ITLP D+
Sbjct: 61 YLSNSVIQELLKISEEEFGIPTEGPITLPFDS 92
>AT1G20470.1 | chr1:7094325-7094765 FORWARD LENGTH=147
Length = 146
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 42 KGHCVLYTTDGARFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCL 101
KGH +YT +G RF +PL YL IF LL +++EEFG + +PCD +M++++ L
Sbjct: 25 KGHFAVYTREGRRFVLPLDYLKHPIFQVLLEMAEEEFGSTICGPLQVPCDGGLMDHILML 84
Query: 102 IRRDASEEIEKALLSSIVRPCLNTSVVP 129
+R + + + V+ +N V P
Sbjct: 85 LRNKSLSDHDDDGGDDGVKKTMNQDVSP 112
>AT4G00880.1 | chr4:366692-367060 REVERSE LENGTH=123
Length = 122
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 54 RFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKA 113
RF +P+MY N +F +LL+ ++EEFGFA IT+PC YV LI R+ + +
Sbjct: 45 RFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEFRYVQGLIDRENTRFLGTN 104
Query: 114 LLS 116
LL
Sbjct: 105 LLD 107
>AT3G61900.1 | chr3:22925813-22926379 FORWARD LENGTH=137
Length = 136
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 54 RFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDAS 107
RF VP+ Y N +F +LLR ++EE+GF IT+PC V YV +I R+ S
Sbjct: 48 RFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVFRYVQDMINRERS 101
>AT3G60690.1 | chr3:22435262-22435774 FORWARD LENGTH=171
Length = 170
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 42 KGHCVLY--TTDG--ARFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEY 97
KGH +Y DG R VP++Y N +F ELLR ++EEFGF+ IT+PC S +
Sbjct: 90 KGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGELLREAEEEFGFSQEGGITIPCPYSDFKR 149
Query: 98 VMCLI 102
V I
Sbjct: 150 VQTRI 154
>AT2G18010.1 | chr2:7833902-7834240 FORWARD LENGTH=113
Length = 112
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 20 SSGRQTASIDGCCSTATAYVAD---KGHCVLYT-TDGARFEVPLMYLNTAIFCELLRVSQ 75
SS R+ +++GC + KGH +Y + +R+ VP+ +L+ + F LLR+++
Sbjct: 25 SSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPISWLHHSEFQTLLRLAE 84
Query: 76 EEFGFASNNKITLPCDASVMEYVMCLIR 103
EEFGF + +T+PCD ++ + R
Sbjct: 85 EEFGFDHDMGLTIPCDEVFFRSLISMFR 112
>AT1G75580.1 | chr1:28377530-28377856 FORWARD LENGTH=109
Length = 108
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 1 MISSRKLAQLG--KKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDG-ARFEV 57
M + KL Q K+ + +S G++ +++ G + KGH V+Y + R+ V
Sbjct: 3 MKKANKLTQTAMIKQILKRCSSLGKKQSNVYGEDENGSPLNVPKGHFVVYVGENRVRYVV 62
Query: 58 PLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIR 103
P+ +L F LL+ ++EEFGF + +T+PC+ V + ++R
Sbjct: 63 PISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108
>AT2G46690.1 | chr2:19180904-19181269 FORWARD LENGTH=122
Length = 121
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 54 RFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDAS 107
RF VP++Y N +F +LL+ +++E+GF IT+PC YV LI + S
Sbjct: 42 RFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERS 95
>AT5G66260.1 | chr5:26471269-26471658 FORWARD LENGTH=100
Length = 99
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 17/78 (21%)
Query: 42 KGHCVLYTTDG-ARFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMC 100
KGH V+Y +R +P+ +L IF LL+ S+EEFGF +N +T+PCD
Sbjct: 36 KGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCD--------- 86
Query: 101 LIRRDASEEIEKALLSSI 118
E +AL+SSI
Sbjct: 87 -------EHFFRALISSI 97
>AT2G45210.1 | chr2:18641884-18642372 FORWARD LENGTH=163
Length = 162
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 42 KGHCVLYT--TDG--ARFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEY 97
+GH +Y DG R VP++Y N +F ELLR +++E+GF IT+PC S E
Sbjct: 81 RGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIPCLYSDFER 140
Query: 98 VMCLIRRDASEEI 110
V I +S +
Sbjct: 141 VKTRIASGSSSRV 153
>AT5G20810.2 | chr5:7044791-7045363 FORWARD LENGTH=191
Length = 190
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 31 CCSTATAYVADKGHCVLYT-TDGARFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLP 89
C S + KG+ +Y + RF +P YL+ ++F LL ++EEFGF + +T+P
Sbjct: 70 CQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIP 129
Query: 90 CDASVMEYVM 99
C+ +Y++
Sbjct: 130 CEVETFKYLL 139
>AT5G10990.1 | chr5:3476884-3477330 FORWARD LENGTH=149
Length = 148
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 6 KLAQLGKKWQ-RMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDG-ARFEVPLMYLN 63
KL Q+ ++W+ + SS R++ D GH +Y RF V YLN
Sbjct: 16 KLRQMLRQWRNKARMSSVRRSVPSD----------VPSGHVAVYVGRSCRRFVVLATYLN 65
Query: 64 TAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDA 106
I LL ++EEFGFA+ + +PC+ SV E + I R +
Sbjct: 66 HPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITRSS 108
>AT4G34760.1 | chr4:16582471-16582794 REVERSE LENGTH=108
Length = 107
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 42 KGHCVLYTTDG-ARFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMC 100
KGH +Y + +R+ VP+ +L F LL+ ++EEFGF + +T+PCD V + +
Sbjct: 45 KGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTS 104
Query: 101 LIR 103
+IR
Sbjct: 105 MIR 107
>AT1G75590.1 | chr1:28383250-28383714 REVERSE LENGTH=155
Length = 154
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 6 KLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDG-ARFEVPLMYLNT 64
+L Q+ ++W+ R ++S C + GH +Y RF V YLN
Sbjct: 16 RLRQMLRRWR----DQARMSSSFSRCVPSDVP----SGHVAVYVGSSCRRFVVRATYLNH 67
Query: 65 AIFCELLRVSQEEFGFASNNKITLPCDASVME 96
+ LL ++EEFGF + + +PC+ SV E
Sbjct: 68 PVLRNLLVQAEEEFGFVNQGPLVIPCEESVFE 99
>AT1G19840.1 | chr1:6872794-6873255 REVERSE LENGTH=154
Length = 153
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 6 KLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDG-ARFEVPLMYLNT 64
+L Q+ ++W+ + +S+ C + GH + G RF V YLN
Sbjct: 16 RLRQMLRRWRNKA-----RLSSVSRCVPSDVP----SGHVAVCVGSGCRRFVVRASYLNH 66
Query: 65 AIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLI 102
I LL ++EEFGFA+ + +PC+ SV E + I
Sbjct: 67 PIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFI 104
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,753,002
Number of extensions: 93460
Number of successful extensions: 334
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 343
Number of HSP's successfully gapped: 24
Length of query: 141
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 52
Effective length of database: 8,666,545
Effective search space: 450660340
Effective search space used: 450660340
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 106 (45.4 bits)