BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0546500 Os09g0546500|Os09g0546500
(144 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G27780.1 | chr5:9838885-9839313 REVERSE LENGTH=143 101 1e-22
AT1G29500.1 | chr1:10321290-10321697 FORWARD LENGTH=136 101 2e-22
AT1G29420.1 | chr1:10301483-10301908 REVERSE LENGTH=142 99 9e-22
AT1G29450.1 | chr1:10305981-10306406 REVERSE LENGTH=142 98 1e-21
AT1G29460.1 | chr1:10307609-10308055 REVERSE LENGTH=149 97 3e-21
AT1G29430.1 | chr1:10302801-10303226 REVERSE LENGTH=142 92 6e-20
AT1G29510.1 | chr1:10322683-10323114 FORWARD LENGTH=144 91 3e-19
AT1G29440.1 | chr1:10304571-10304996 REVERSE LENGTH=142 85 1e-17
AT1G29490.1 | chr1:10319835-10320143 FORWARD LENGTH=103 81 2e-16
AT1G76190.1 | chr1:28592225-28592596 FORWARD LENGTH=124 76 5e-15
AT1G20470.1 | chr1:7094325-7094765 FORWARD LENGTH=147 64 3e-11
AT3G61900.1 | chr3:22925813-22926379 FORWARD LENGTH=137 56 6e-09
AT1G75580.1 | chr1:28377530-28377856 FORWARD LENGTH=109 55 9e-09
AT4G00880.1 | chr4:366692-367060 REVERSE LENGTH=123 55 1e-08
AT4G31320.1 | chr4:15193993-15194562 REVERSE LENGTH=190 54 3e-08
AT3G60690.1 | chr3:22435262-22435774 FORWARD LENGTH=171 53 5e-08
AT4G34760.1 | chr4:16582471-16582794 REVERSE LENGTH=108 53 6e-08
AT2G24400.1 | chr2:10377993-10378529 REVERSE LENGTH=179 52 1e-07
AT4G36110.1 | chr4:17090031-17090345 FORWARD LENGTH=105 52 1e-07
AT5G20810.2 | chr5:7044791-7045363 FORWARD LENGTH=191 50 3e-07
AT3G43120.1 | chr3:15094644-15095312 FORWARD LENGTH=161 50 4e-07
AT2G16580.1 | chr2:7186602-7186928 REVERSE LENGTH=109 49 1e-06
AT5G66260.1 | chr5:26471269-26471658 FORWARD LENGTH=100 48 2e-06
>AT5G27780.1 | chr5:9838885-9839313 REVERSE LENGTH=143
Length = 142
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 74/120 (61%)
Query: 1 MISTKRIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADGMRFEVPL 60
MI+ K + +LAK W++ AA RKR++ S KG +VYTAD +RF PL
Sbjct: 2 MINAKTLMKLAKTWQQRAALKRKRISFQRSSITTTSSQTTVEKGCFVVYTADKIRFSFPL 61
Query: 61 RYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKAFLSSMA 120
YL + ELL++S+EEFG ++G ITLP D++ +EY++ L++R D EKA L S++
Sbjct: 62 SYLSNTIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDEDTEKALLWSIS 121
>AT1G29500.1 | chr1:10321290-10321697 FORWARD LENGTH=136
Length = 135
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 4/120 (3%)
Query: 1 MISTKRIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADGMRFEVPL 60
M++TK++ ++ +KW++ AA RKR++ P + KG +VYTAD RF P+
Sbjct: 1 MMNTKKLIKMFRKWQQRAALHRKRISFQRP----STRSTTVEKGCFVVYTADNTRFAFPI 56
Query: 61 RYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKAFLSSMA 120
YL VF E+L +S+EEFG + G ITLP D++ +EY++ L++R D EKA L S++
Sbjct: 57 SYLSNSVFQEILEISEEEFGLPTGGPITLPFDSVFLEYLIKLIKRRMDGDTEKALLMSIS 116
>AT1G29420.1 | chr1:10301483-10301908 REVERSE LENGTH=142
Length = 141
Score = 98.6 bits (244), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 1 MISTKRIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADGMRFEVPL 60
M++TK++ ++AKKW++ AA RKR++ S+ A KG +VYT+D +RF P+
Sbjct: 1 MMNTKKLLKMAKKWQQRAALRRKRISFHR-STDTTSSSTAAEKGCFVVYTSDRIRFAFPI 59
Query: 61 RYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKAFLSSMA 120
YL V ELL++S+EEFG ++G ITLP D++ +EY++ L++R D EKA ++S++
Sbjct: 60 SYLSNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKALITSIS 119
>AT1G29450.1 | chr1:10305981-10306406 REVERSE LENGTH=142
Length = 141
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Query: 1 MISTKRIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADGMRFEVPL 60
M++TK++ ++AKKW++ AA RKR++ + + S+ A KG +VYT D RF PL
Sbjct: 1 MMNTKKLIKMAKKWQQRAALHRKRISFQ--RSSSATSSTAAEKGCFVVYTTDSTRFAFPL 58
Query: 61 RYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKAFLSSMA 120
YL VF ELL++S+EEFG + G IT P D++ +EY++ L++R D EKA L S++
Sbjct: 59 SYLSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSIS 118
>AT1G29460.1 | chr1:10307609-10308055 REVERSE LENGTH=149
Length = 148
Score = 96.7 bits (239), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 1 MISTKRIAQLAKKWRRMAAKGRKRLTMM------APQEAEGCSTMVAGKGYCIVYTADGM 54
MI+TK++ ++AKKW++ AA RKR++ S+ KG +VYT D +
Sbjct: 1 MINTKKLLKMAKKWQQRAALKRKRISFQRSTTTTTTTTTTTSSSTAVEKGCFVVYTVDKI 60
Query: 55 RFEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKA 114
RF PL YL VF ELL++S+EEFG + G ITLP D++ +EY++ + R D EKA
Sbjct: 61 RFAFPLSYLNNSVFEELLKISEEEFGLRAGGPITLPFDSVFLEYLIKFIERRMDGDTEKA 120
Query: 115 FLSSMA 120
L S++
Sbjct: 121 LLMSIS 126
>AT1G29430.1 | chr1:10302801-10303226 REVERSE LENGTH=142
Length = 141
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 1 MISTKRIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADGMRFEVPL 60
MI+ K++ +LAKKW++ AA RKR++ T V KG +VYTAD +RF PL
Sbjct: 2 MINAKKLMKLAKKWQQRAALKRKRISFQRSSITTSSQTAVE-KGCFVVYTADKIRFSFPL 60
Query: 61 RYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKAFLSSMA 120
YL + ELL++S+EEFG ++G ITLP D+ +EY++ L++R D EKA L S++
Sbjct: 61 SYLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLSIS 120
>AT1G29510.1 | chr1:10322683-10323114 FORWARD LENGTH=144
Length = 143
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Query: 1 MISTKRIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADGMRFEVPL 60
MI+ K++ ++AKKW++ AA RKR++ S+ V KG +VYTAD +RF P+
Sbjct: 2 MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVE-KGCFVVYTADKIRFAFPI 60
Query: 61 RYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKAFLSSMA 120
YL + ELL++S+EEFG ++G ITLP D++ +EY++ L++R D EKA L S++
Sbjct: 61 SYLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSIS 120
>AT1G29440.1 | chr1:10304571-10304996 REVERSE LENGTH=142
Length = 141
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 1 MISTKRIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADGMRFEVPL 60
MI+ K++ ++AKKW++ AA RKR++ S+ KG +VYTAD +RF P+
Sbjct: 1 MINAKKLMKMAKKWQQRAALHRKRISFQR-SSVFTSSSSTVEKGCFVVYTADKIRFAFPI 59
Query: 61 RYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKAFLSSMA 120
YL V ELL++S+E+FG ++G ITLP D+ +EY++ L++R D EKA L S++
Sbjct: 60 SYLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSIS 119
>AT1G29490.1 | chr1:10319835-10320143 FORWARD LENGTH=103
Length = 102
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 1 MISTKRIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADGMRFEVPL 60
M++TK++ ++AKKW++ AA RKR++ S+ V KG +VYTAD +RF P+
Sbjct: 1 MMNTKKLMKMAKKWQQRAALRRKRISFQRSNSTTSSSSAVE-KGCFVVYTADQVRFAFPI 59
Query: 61 RYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEY 98
YL V ELL++S+EEFG ++G ITLP D++ +
Sbjct: 60 SYLSNSVIQELLKISEEEFGIPTEGPITLPFDSIRFSW 97
>AT1G76190.1 | chr1:28592225-28592596 FORWARD LENGTH=124
Length = 123
Score = 76.3 bits (186), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 24/122 (19%)
Query: 6 RIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADGMRFEVPLRYLGT 65
R+++L +KWRR RK KG+ VYT +G RF +PL YL
Sbjct: 10 RLSELMEKWRR-----RK-------------------KGHFAVYTNEGKRFVLPLDYLNH 45
Query: 66 MVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKAFLSSMAISCHY 125
+ LL+M+++EFG T DG + +PCD +M++++ L+RR+ S D + SS + +C
Sbjct: 46 PMLQVLLQMAEDEFGTTIDGPLKVPCDGSLMDHIIMLVRRSMSHDYDDVEKSSTSSTCKG 105
Query: 126 AN 127
A+
Sbjct: 106 AS 107
>AT1G20470.1 | chr1:7094325-7094765 FORWARD LENGTH=147
Length = 146
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 43 KGYCIVYTADGMRFEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCL 102
KG+ VYT +G RF +PL YL +F LL M++EEFG T G + +PCD +M++++ L
Sbjct: 25 KGHFAVYTREGRRFVLPLDYLKHPIFQVLLEMAEEEFGSTICGPLQVPCDGGLMDHILML 84
Query: 103 LRRNA 107
LR +
Sbjct: 85 LRNKS 89
>AT3G61900.1 | chr3:22925813-22926379 FORWARD LENGTH=137
Length = 136
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 54 MRFEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVD 110
RF VP+ Y +F +LLR ++EE+GF G IT+PC V YV ++ R S+D
Sbjct: 47 QRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVFRYVQDMINRERSLD 103
>AT1G75580.1 | chr1:28377530-28377856 FORWARD LENGTH=109
Length = 108
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 6 RIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADG-MRFEVPLRYLG 64
+ A + + +R ++ G+K+ + E E S + KG+ +VY + +R+ VP+ +L
Sbjct: 11 QTAMIKQILKRCSSLGKKQSNVYG--EDENGSPLNVPKGHFVVYVGENRVRYVVPISFLT 68
Query: 65 TMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLR 104
F LL+ ++EEFGF D +T+PC+ +V + +LR
Sbjct: 69 RPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108
>AT4G00880.1 | chr4:366692-367060 REVERSE LENGTH=123
Length = 122
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 33 AEGCSTMVAGKGYCIVYTADGMRFEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCD 92
+GC + G+G + RF +P+ Y +FG+LL+ ++EEFGF G IT+PC
Sbjct: 29 PKGCLAVKVGQG------EEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCH 82
Query: 93 AMVMEYVMCLLRRNAS 108
YV L+ R +
Sbjct: 83 VEEFRYVQGLIDRENT 98
>AT4G31320.1 | chr4:15193993-15194562 REVERSE LENGTH=190
Length = 189
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 37 STMVAGKGYCIVYTA-DGMRFEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMV 95
T KGY V + R+++P YL F LLR ++EEFGF G + +PC+ V
Sbjct: 76 DTTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEEFGFEQAGILRIPCEVAV 135
Query: 96 MEYVMCLLRRNAS 108
E ++ ++ N S
Sbjct: 136 FESILKIMEDNKS 148
>AT3G60690.1 | chr3:22435262-22435774 FORWARD LENGTH=171
Length = 170
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 43 KGYCIVY----TADGMRFEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPC 91
KG+ VY D R VP+ Y +FGELLR ++EEFGF+ +G IT+PC
Sbjct: 90 KGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGELLREAEEEFGFSQEGGITIPC 142
>AT4G34760.1 | chr4:16582471-16582794 REVERSE LENGTH=108
Length = 107
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 34 EGCSTMVAGKGYCIVYTADGM-RFEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCD 92
E C + KG+ VY + R+ VP+ +L F LL+ ++EEFGF D +T+PCD
Sbjct: 36 EDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCD 95
Query: 93 AMVMEYVMCLLR 104
+V + + ++R
Sbjct: 96 ELVFQTLTSMIR 107
>AT2G24400.1 | chr2:10377993-10378529 REVERSE LENGTH=179
Length = 178
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 16/114 (14%)
Query: 6 RIAQLAKKWRRMAAKGRKRLTMMAPQEAEG---------------CSTMVAGKGYCIVYT 50
++ QL KKWR+ A + + G KGY V
Sbjct: 14 KLQQLLKKWRKQAIASKAANNNNEDNNSSGGGSKSIKFLKRTLSFTDVTAVPKGYLAVSV 73
Query: 51 A-DGMRFEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLL 103
+ R+ +P YL F LLR ++EEFGF G + +PC+ V E ++ ++
Sbjct: 74 GLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQAGVLRIPCEVSVFESILKIM 127
>AT4G36110.1 | chr4:17090031-17090345 FORWARD LENGTH=105
Length = 104
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 23 KRLTMMAPQEAEGCSTMVAGKGYCIVYTADGM-RFEVPLRYLGTMVFGELLRMSQEEFGF 81
KR + + + C KG+ VY R+ VP+ +L F LL++++EEFGF
Sbjct: 22 KRCSSLGKKNQGNCYFNDVPKGHFPVYVGQHRSRYVVPISWLDHHEFQSLLQLAEEEFGF 81
Query: 82 TSDGKITLPCDAMVMEYVMCLLR 104
+ +T+PCD +V ++ + R
Sbjct: 82 EHEMGLTIPCDEVVFRSLISMFR 104
>AT5G20810.2 | chr5:7044791-7045363 FORWARD LENGTH=191
Length = 190
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 28/129 (21%)
Query: 6 RIAQLAKKWRRMA----------AKGRKRLTMMAP-------------QEAEGCSTMVAG 42
R+ ++ +KW+ + A G++ + M++P + E C +
Sbjct: 17 RLKEILQKWQTVTIGPKSEVPPLAAGKQAVAMISPAINKRLLDVKNGDSDEETCQSPEPP 76
Query: 43 ----KGYCIVYTADGMR-FEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVME 97
KG VY +R F +P YL +F LL ++EEFGF G +T+PC+ +
Sbjct: 77 HDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFK 136
Query: 98 YVMCLLRRN 106
Y++ + N
Sbjct: 137 YLLKCMENN 145
>AT3G43120.1 | chr3:15094644-15095312 FORWARD LENGTH=161
Length = 160
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 43 KGYCIVYTADGMR-FEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMC 101
KGY VY +R F +P +L +F LL ++EE+GF G +T+PC+ +Y++
Sbjct: 81 KGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFKYLLK 140
Query: 102 LLRRNASVD 110
+ + D
Sbjct: 141 CIENHPKDD 149
>AT2G16580.1 | chr2:7186602-7186928 REVERSE LENGTH=109
Length = 108
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 43 KGYCIVYTADGM-RFEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMC 101
KG+ VY R+ VP+ +L + F LLR ++EEFGF D +T+PCD + + +
Sbjct: 46 KGHFPVYVGHNRSRYIVPISFLTNLDFQCLLRRAEEEFGFDHDMGLTIPCDELFFQDLTS 105
Query: 102 LLR 104
++R
Sbjct: 106 MIR 108
>AT5G66260.1 | chr5:26471269-26471658 FORWARD LENGTH=100
Length = 99
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 43 KGYCIVYTADGM-RFEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCD 92
KG+ +VY R +P+ +L +F LL+ S+EEFGF D +T+PCD
Sbjct: 36 KGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCD 86
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.132 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,811,787
Number of extensions: 99137
Number of successful extensions: 328
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 334
Number of HSP's successfully gapped: 24
Length of query: 144
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 55
Effective length of database: 8,666,545
Effective search space: 476659975
Effective search space used: 476659975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 106 (45.4 bits)