BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0538500 Os09g0538500|AK121538
(515 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51280.1 | chr3:19037229-19038781 FORWARD LENGTH=431 467 e-132
AT5G48850.1 | chr5:19805576-19807699 REVERSE LENGTH=307 290 2e-78
AT1G04770.1 | chr1:1336564-1337767 REVERSE LENGTH=304 285 4e-77
AT4G20900.1 | chr4:11184103-11185844 REVERSE LENGTH=451 263 2e-70
AT5G44330.1 | chr5:17857325-17859056 FORWARD LENGTH=470 227 1e-59
AT5G22794.2 | chr5:7608242-7611591 FORWARD LENGTH=238 87 2e-17
>AT3G51280.1 | chr3:19037229-19038781 FORWARD LENGTH=431
Length = 430
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 271/499 (54%), Positives = 312/499 (62%), Gaps = 82/499 (16%)
Query: 20 LRPTKSAPCSPIKPXXXXXXXXXXXXMLRTNSDSFHVAHKVPVGDTPYVRAKRVQLVDKD 79
RPTKSAPCSP KP + RT S+SFH HKVPVGD+PYVRAK VQLV+KD
Sbjct: 6 FRPTKSAPCSPAKPLG----------ISRTQSESFHAIHKVPVGDSPYVRAKNVQLVEKD 55
Query: 80 PEKAIALFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNI 139
PE+AI LFW AINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLR RCSDQAQESLDNI
Sbjct: 56 PERAIPLFWKAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRVRCSDQAQESLDNI 115
Query: 140 LLDLYKRCGRLDDQISLLKHKLQLIHQGHAFNGKRTKTARSQGRKFQVTLEQEATRLLGN 199
LLDLYKRCGRLDDQI LLKHKL LI +G AFNGKRTKTARSQG+KFQV++EQEATRLLGN
Sbjct: 116 LLDLYKRCGRLDDQIGLLKHKLFLIQKGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGN 175
Query: 200 LGWALMQKENYTEAEGAYRRALLIGPDNNKMCNLGICLMKQGRVLEAKDVLKQVRPAGVD 259
LGWALMQ++N+ EAE AYRRAL I PDNNKMCNLGICLMKQGR+ EAK+ L++V+PA VD
Sbjct: 176 LGWALMQRDNFVEAEDAYRRALSIAPDNNKMCNLGICLMKQGRIDEAKETLRRVKPAVVD 235
Query: 260 GLRGADSHLKAYERAQEMLRDLEAKLVGRRLPRAGDQLVDKSWLFDALLLGSSSSIWQPQ 319
G RG DSHLKAYERAQ+ML DL +++ + R GD V++ LFDA+ SSSIWQPQ
Sbjct: 236 GPRGVDSHLKAYERAQQMLNDLGSEM----MRRGGDDKVEQRRLFDAIF--GSSSIWQPQ 289
Query: 320 PCIDHMLXXX---XXXXRDQFADEXXXXXXXXXXXXXXXLQPNILRVDAQPFYSLRMPPL 376
PC + + D + DE N LRVDA+PF+S ++
Sbjct: 290 PCSEQTVKAKPKPGLSNGDGYGDENVKMSVNPVVV-------NPLRVDAKPFFSSKL--- 339
Query: 377 ATKPQNIQQKPPTPQPQVHDPMGNLKRTRSGNAMDKXXXXXXGPVEKEPINDENSGRRKS 436
V LKRTRS + G E E N+ R+
Sbjct: 340 -----------------VISNNEKLKRTRSSSQGMGMLSGIGGDHEGET----NTSTRRR 378
Query: 437 LSAEERWPE--LPDHSAFXXXXXXXXXXXXXXXXXXXXXERNDNCCKPAPPAGCDTSPAM 494
LS E++ E LPD+ F A G +T
Sbjct: 379 LSMEKKATECGLPDNKDFEDAIM-------------------------AAVLGTETKVDK 413
Query: 495 KEKIGKRLRIFQDITQTLN 513
KRL++FQDIT LN
Sbjct: 414 -----KRLKVFQDITLCLN 427
>AT5G48850.1 | chr5:19805576-19807699 REVERSE LENGTH=307
Length = 306
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 168/219 (76%), Gaps = 3/219 (1%)
Query: 47 LRTNSDSFHVAHKVPVGDTPYVRAKRVQLVDKDPEKAIALFWAAINAGDRVDSALKDMAI 106
L + + FHV HKVP GDTPYVRAK QL++K+PE AI FW AIN GDRVDSALKDMA+
Sbjct: 20 LMKDDELFHVIHKVPCGDTPYVRAKHAQLIEKNPEMAIVWFWKAINTGDRVDSALKDMAV 79
Query: 107 VMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQISLLKHKLQLIHQ 166
VMKQ +R+EEAIEAIKS R RCS +Q+SLDN+L+DLYK+CGR+++Q+ LLK KL+ I+Q
Sbjct: 80 VMKQLDRSEEAIEAIKSFRPRCSKNSQDSLDNVLIDLYKKCGRMEEQVELLKRKLRQIYQ 139
Query: 167 GHAFNGKRTKTARSQGRKFQVTLEQEATRLLGNLGWALMQKENYTEAEGAYRRALLIGPD 226
G AFNGK TKTARS G+KFQVT++QE +RLLGNLGWA MQ+ Y AE YR+A ++ PD
Sbjct: 140 GEAFNGKPTKTARSHGKKFQVTVQQEISRLLGNLGWAYMQQAKYLSAEAVYRKAQMVEPD 199
Query: 227 NNKMCNLGICLMKQGRVLEAKDVLKQV---RPAGVDGLR 262
NK CNL +CL+KQGR E + VL V R G D R
Sbjct: 200 ANKSCNLAMCLIKQGRFEEGRLVLDDVLEYRVLGADDCR 238
>AT1G04770.1 | chr1:1336564-1337767 REVERSE LENGTH=304
Length = 303
Score = 285 bits (729), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 143/234 (61%), Positives = 181/234 (77%), Gaps = 5/234 (2%)
Query: 49 TNSDSFHVAHKVPVGDTPYVRAKRVQLVDKDPEKAIALFWAAINAGDRVDSALKDMAIVM 108
+++ +++V HK+P GD+PYVRAK VQLV+KD E AI LFW AI A DRVDSALKDMA++M
Sbjct: 15 SSAAAYNVVHKLPHGDSPYVRAKHVQLVEKDAEAAIELFWIAIKARDRVDSALKDMALLM 74
Query: 109 KQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQISLLKHKLQLIHQGH 168
KQQNRAEEAI+AI+S R CS QAQESLDN+L+DLYK+CGR+++Q+ LLK KL +I+QG
Sbjct: 75 KQQNRAEEAIDAIQSFRDLCSRQAQESLDNVLIDLYKKCGRIEEQVELLKQKLWMIYQGE 134
Query: 169 AFNGKRTKTARSQGRKFQVTLEQEATRLLGNLGWALMQKENYTEAEGAYRRALLIGPDNN 228
AFNGK TKTARS G+KFQVT+E+E +R+LGNLGWA MQ +YT AE YR+A LI PD N
Sbjct: 135 AFNGKPTKTARSHGKKFQVTVEKETSRILGNLGWAYMQLMDYTAAEAVYRKAQLIEPDAN 194
Query: 229 KMCNLGICLMKQGRVLEAKDVLKQVRPAGVDGLRGA-DSHLKAYERAQEMLRDL 281
K CNL CL+KQG+ EA+ +L R ++ G+ D L A R QE+L +L
Sbjct: 195 KACNLCTCLIKQGKHDEARSIL--FRDVLMENKEGSGDPRLMA--RVQELLSEL 244
>AT4G20900.1 | chr4:11184103-11185844 REVERSE LENGTH=451
Length = 450
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/249 (51%), Positives = 171/249 (68%), Gaps = 16/249 (6%)
Query: 52 DSFHVAHKVPVGDTPYVRAKRVQLVDKDPEKAIALFWAAINAGDRVDSALKDMAIVMKQQ 111
D FH+ HKVP GD+PYVRAK QL+DKDP +AI+LFW AINAGDRVDSALKDMA+VMKQ
Sbjct: 49 DPFHIVHKVPSGDSPYVRAKHAQLIDKDPNRAISLFWTAINAGDRVDSALKDMAVVMKQL 108
Query: 112 NRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQISLLKHKLQLIHQGHAFN 171
R++E IEAIKS R CS ++Q+S+DN+LL+LYK+ GR++++ LL+HKLQ + QG F
Sbjct: 109 GRSDEGIEAIKSFRYLCSFESQDSIDNLLLELYKKSGRIEEEAVLLEHKLQTLEQGMGFG 168
Query: 172 GKRTKTARSQGRKFQVTLEQEATRLLGNLGWALMQKENYTEAEGAYR------------- 218
G+ ++ R QG+ +T+EQE R+LGNLGW +Q NY AE YR
Sbjct: 169 GRVSRAKRVQGKHVIMTIEQEKARILGNLGWVHLQLHNYGIAEQHYRFGFVTKIPNIDYC 228
Query: 219 ---RALLIGPDNNKMCNLGICLMKQGRVLEAKDVLKQVRPAGVDGLRGADSHLKAYERAQ 275
RAL + D NK+CNL ICLM+ R+ EAK +L VR + + G + K+Y+RA
Sbjct: 229 LVMRALGLERDKNKLCNLAICLMRMSRIPEAKSLLDDVRDSPAESECGDEPFAKSYDRAV 288
Query: 276 EMLRDLEAK 284
EML ++E+K
Sbjct: 289 EMLAEIESK 297
>AT5G44330.1 | chr5:17857325-17859056 FORWARD LENGTH=470
Length = 469
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 157/238 (65%), Gaps = 5/238 (2%)
Query: 50 NSDSFHVAHKVPVGDTPYVRAKRVQLVDKDPEKAIALFWAAINAGDRVDSALKDMAIVMK 109
N +SF +V GD+PYVRAK QLV KDP +AI+LFWAAINAGDRVDSALKDM +V+K
Sbjct: 44 NQESF----RVRTGDSPYVRAKHAQLVSKDPNRAISLFWAAINAGDRVDSALKDMVVVLK 99
Query: 110 QQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQISLLKHKLQLIHQGHA 169
Q NR +E IEAIKS R C ++Q+S+DN+LL+LY + GR+ + LL+HKL+ + Q
Sbjct: 100 QLNRFDEGIEAIKSFRYLCPFESQDSIDNLLLELYMKSGRITEVAELLEHKLRTLEQDKH 159
Query: 170 FNGKRTKTARSQGRKFQVTLEQEATRLLGNLGWALMQKENYTEAEGAYRRALLIGPDNNK 229
+ G+ RS + T+EQE R+LGNL W +Q NY AE YR AL + PDNNK
Sbjct: 160 YGGRIKIAKRSHEEQNNKTIEQEKARILGNLAWVHLQLHNYGIAEQYYRNALSLEPDNNK 219
Query: 230 MCNLGICLMKQGRVLEAKDVLKQVRPAGVDGLRGADSHLKAYERAQEMLRDLEAKLVG 287
+CNL ICL++ R EAK +L+ V+ + + + + K++ERA EML + E V
Sbjct: 220 LCNLAICLIRMERTHEAKSLLEDVKQSLGNQWKN-EPFCKSFERATEMLAEREQATVA 276
>AT5G22794.2 | chr5:7608242-7611591 FORWARD LENGTH=238
Length = 237
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 131 QAQESLDNILLDLYKRCGRLDDQISLLKHKLQLIHQGHAFNGKRTKTARSQGRKFQVTLE 190
QAQESL+N+L+DLYK+ GR ++Q+ LLK +L +I+Q AFNGK K ARS GRKFQVT+E
Sbjct: 71 QAQESLENVLIDLYKKGGRTEEQVELLKLQLWMIYQEEAFNGKPAKIARSHGRKFQVTVE 130
Query: 191 QEATRLL 197
+E +R+L
Sbjct: 131 KETSRML 137
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,727,894
Number of extensions: 367538
Number of successful extensions: 1552
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1544
Number of HSP's successfully gapped: 6
Length of query: 515
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 412
Effective length of database: 8,282,721
Effective search space: 3412481052
Effective search space used: 3412481052
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)