BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0536000 Os09g0536000|AK103074
         (619 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36050.2  | chr4:17052323-17055044 REVERSE LENGTH=611          463   e-130
AT2G41460.1  | chr2:17285731-17288769 FORWARD LENGTH=537           77   4e-14

>AT4G36050.2 | chr4:17052323-17055044 REVERSE LENGTH=611
          Length = 610

 Score =  463 bits (1191), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/611 (43%), Positives = 347/611 (56%), Gaps = 43/611 (7%)

Query: 2   VKIVTYNVNGLRPRVAQHGSXXXXXXXXXXXIICFQETKLSRQDLSGDVIMAEGYEAFIS 61
           +KIVTYNVNGLR RV+Q  S           IICFQETKL RQ+L+ D+ +A+GYE+F S
Sbjct: 1   MKIVTYNVNGLRQRVSQFDSLLKLLDSFDADIICFQETKLRRQELTADLAIADGYESFFS 60

Query: 62  CNRSS-KGRGAYSGVATFCRVTSAFSSQEVALPVAAEEGFTGLQETAKNSETIGDFVLVT 120
           C R+S KGR  YSGVATFCRV SA SS E ALPV AEEG TGL     NS + G     T
Sbjct: 61  CTRTSEKGRTGYSGVATFCRVKSASSSCETALPVTAEEGITGLV----NSNSRGG-KSET 115

Query: 121 PXXXXXXXXXXXXXXXXXDNEGRCVITDHGHFVLFNIYGPAVEEDDIERVRFKLLFYKIL 180
                             D EGRCVITDHGHFV+FN+YGP    DD +R+ FK  FY +L
Sbjct: 116 STVAEGLEEYEKEELLMIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEFKHRFYGVL 175

Query: 181 QRRWEHLLALGKRVFVVGDLNIAPSSIDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAF 240
           +RRWE LL  G+RVFVVGDLNIAP ++DRC+A P FEK  FRKW RS+L E GG F D F
Sbjct: 176 ERRWECLLRQGRRVFVVGDLNIAPFAMDRCEAGPDFEKNEFRKWFRSLLVERGGSFSDVF 235

Query: 241 RSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDHSIFPCHVEECEI 300
           RSKHPER  A+TC++   GAE +NYGSRIDHIL++G+C H       HS   CHV+EC+I
Sbjct: 236 RSKHPERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKECDI 295

Query: 301 MDHFRRGNSENM-SMWKGGRSSKLEGSDHIPVYIVLNEIPELPVHNTPSSAARYLPEIRG 359
           +  ++R  +ENM + WKGG  +K +GSDH+PV+I  +++P++P H+TP  A+RYLP I G
Sbjct: 296 LTEYKRFKNENMPTRWKGGLVTKFKGSDHVPVFISFDDLPDIPEHSTPPLASRYLPMIYG 355

Query: 360 RQQSIVSFLRKGMIYEHKDAMSM------DRADESCCGGGLERKAIYKEEPPTDIAKFSK 413
            QQ++VS  +K    E   A+ +           S CG               DI+    
Sbjct: 356 FQQTLVSVFKKRRANEEAKAIEVSCSSSTQSNTSSICG---------------DISTGPL 400

Query: 414 GNDLHSVIKRKIRDQLLNEGSSGNSHNSTAALLAT---------QSRKASFSCSKAVSNK 464
            N     I  +      N+ +SG +   T A   +          S   + + S+    K
Sbjct: 401 RNCGSMGISLEKSCSFENKSTSGVTEAETVAATGSIDNLSDGIRASSVRALNISRDGDRK 460

Query: 465 KNKHNLSSQPTIKSFFQQPKSKPGDSSTNSIVTPPDTLHGMDELHDPKNDCLPESIQCTT 524
           K +   SSQ ++KSFF           ++S          ++ + +P      +S   T+
Sbjct: 461 KARKIQSSQLSLKSFFTTNSKVNNVEDSSSSYVSSSPSSQVESITEPNVSGKEDSEPTTS 520

Query: 525 PATEDQGNSDVPCSLSTDKCNEATLEWQRIQQRMKMTLPLCKGHHEPCIPRSVKK-GSNI 583
              +DQ  S      +  K + A +EWQRIQ  M+ ++PLCKGH E C+ R VKK G   
Sbjct: 521 TQEQDQTGSS-----AKQKNDAALMEWQRIQNLMQNSIPLCKGHKEACVARVVKKPGPTF 575

Query: 584 GRLFYVCARAQ 594
           GR FYVC+RA+
Sbjct: 576 GRRFYVCSRAE 586



>AT2G41460.1 | chr2:17285731-17288769 FORWARD LENGTH=537
          Length = 536

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 125/309 (40%), Gaps = 82/309 (26%)

Query: 2   VKIVTYNVNGLRPRVA-QHGSXXXXXXXXXXXIICFQETKLSRQDLSG-DVIMAEGYE-A 58
           VK++T+NVNGLR  +  +  S           I+C QETKL  +D+      + +GY+ +
Sbjct: 276 VKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDVEEIKKTLIDGYDHS 335

Query: 59  FISCNRSSKGRGAYSGVATFCRVTSAFSSQEVALPVAAEEGFTGLQETAKNSETIGDFVL 118
           F SC+ S  G   YSG A   R+           P++   G TGL               
Sbjct: 336 FWSCSVSKLG---YSGTAIISRIK----------PLSVRYG-TGL--------------- 366

Query: 119 VTPXXXXXXXXXXXXXXXXXDNEGRCVITDHGHFVLFNIYGPAVEEDDIERVRFKLLFYK 178
                               D EGR V  +   F L N Y P    D ++R+ +++    
Sbjct: 367 -----------------SGHDTEGRIVTAEFDSFYLINTYVPN-SGDGLKRLSYRI---- 404

Query: 179 ILQRRWEHLLA-------LGKRVFVVGDLNIAPSSIDRCDA-----QPGF---EKQTFRK 223
                W+  L+         K V + GDLN A   ID  +        GF   E+Q+F  
Sbjct: 405 ---EEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTIEERQSF-- 459

Query: 224 WLRSMLREHGGPFFDAFRSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCG 283
              + L + G  F D FR +HP  VG YT +  + G    N G R+D+ L+S +      
Sbjct: 460 --GANLLDKG--FVDTFRKQHPGVVG-YTYWGYRHGGRKTNKGWRLDYFLVSQSI---AA 511

Query: 284 SVDDHSIFP 292
           +V D  I P
Sbjct: 512 NVHDSYILP 520



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,702,725
Number of extensions: 585420
Number of successful extensions: 1444
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1438
Number of HSP's successfully gapped: 2
Length of query: 619
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 514
Effective length of database: 8,227,889
Effective search space: 4229134946
Effective search space used: 4229134946
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)