BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0534800 Os09g0534800|AK068941
(312 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10330.1 | chr3:3199907-3201642 FORWARD LENGTH=313 566 e-162
AT2G41630.1 | chr2:17355555-17357400 REVERSE LENGTH=313 523 e-149
AT3G29380.1 | chr3:11282407-11283524 REVERSE LENGTH=337 253 1e-67
AT3G57370.1 | chr3:21226839-21228475 REVERSE LENGTH=361 161 5e-40
AT4G36650.1 | chr4:17283283-17285527 REVERSE LENGTH=504 100 8e-22
AT4G10680.1 | chr4:6587521-6588069 FORWARD LENGTH=183 91 6e-19
AT5G39230.1 | chr5:15709474-15709925 FORWARD LENGTH=120 50 2e-06
>AT3G10330.1 | chr3:3199907-3201642 FORWARD LENGTH=313
Length = 312
Score = 566 bits (1460), Expect = e-162, Method: Compositional matrix adjust.
Identities = 264/312 (84%), Positives = 292/312 (93%)
Query: 1 MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVG 60
MSD+FC DCK+HTEV FDHSAGDTVC+ECGLVLE+HS+DETSEWRTFANES DNDPVRVG
Sbjct: 1 MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 61 GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
GPTNPLL DGGL+TVI+KPNG+ G+FLSSSLGRWQNRGSNPDR LI+AF+TIA MADRLG
Sbjct: 61 GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
LVATIKDRANEIYK+VED KS RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240
KEIGRAKE+IVKQL +E GQ +EMGTIHAGDF+RRFCS LGM NQ VKAAQE+VQ+SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240
Query: 241 DIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
DIRRSPISIAAAVIY+ITQLSD+KKPL+DIS+ATGVAEGTIRNSYKDLYP+ S++IP Y
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWY 300
Query: 301 AKEEDLKNLCTP 312
AKEEDLKNL +P
Sbjct: 301 AKEEDLKNLQSP 312
>AT2G41630.1 | chr2:17355555-17357400 REVERSE LENGTH=313
Length = 312
Score = 523 bits (1346), Expect = e-149, Method: Compositional matrix adjust.
Identities = 243/312 (77%), Positives = 280/312 (89%)
Query: 1 MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVG 60
MSD++C DCKK TE+ DHSAGDT+C+ECGLVLE+HS+DETSEWRTFANESS++DP RVG
Sbjct: 1 MSDAYCTDCKKETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVG 60
Query: 61 GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
GPTNPLL D L+TVIAKPNG+ G+FLSSSLGRWQNR SN DR LI AF+TIA M++RLG
Sbjct: 61 GPTNPLLADSALTTVIAKPNGSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLG 120
Query: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
LVATIKDRANE+YK++ED KS RGRNQDA+ AACLYIACRQED+PRT+KEIC +ANGATK
Sbjct: 121 LVATIKDRANELYKRLEDQKSSRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGATK 180
Query: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240
KEIGRAK++IVK L +E GQS+++GTIHAGDF+RRFCS L M+N AVKAAQEAVQ+SEE
Sbjct: 181 KEIGRAKDYIVKTLGLEPGQSVDLGTIHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEF 240
Query: 241 DIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
DIRRSPISIAA VIY+ITQLSDDKK LKDIS ATGVAEGTIRNSYKDLYP+ S++ P+ Y
Sbjct: 241 DIRRSPISIAAVVIYIITQLSDDKKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWY 300
Query: 301 AKEEDLKNLCTP 312
AKEEDLKNL +P
Sbjct: 301 AKEEDLKNLSSP 312
>AT3G29380.1 | chr3:11282407-11283524 REVERSE LENGTH=337
Length = 336
Score = 253 bits (645), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 193/318 (60%), Gaps = 12/318 (3%)
Query: 1 MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANE--SSDNDPVR 58
M + C DCK+ T + DHS+GDT+C+ECGLVLEAH ++ + EWRTFA++ SD DP R
Sbjct: 1 MEEETCLDCKRPTIMVVDHSSGDTICSECGLVLEAHIIEYSQEWRTFASDDNHSDRDPNR 60
Query: 59 VGGPTNPLLTDGGLSTVIAKPNGAQGEFLS----SSLGRWQNRGSNPDRSLI-LAFRTIA 113
VG TNP L G L T+I KP LS S+L R N+ N + LI AF I
Sbjct: 61 VGAATNPFLKSGDLVTIIEKPKETASSVLSKDDISTLFRAHNQVKNHEEDLIKQAFEEIQ 120
Query: 114 NMADRLGLVATIKDRANEIYKKVE---DLKSIRGRNQDAILAACLYIACRQEDRPRTVKE 170
M D L L I RA EI K + + K RG+ +AI AA + ACR+ RT+KE
Sbjct: 121 RMTDALDLDIVINSRACEIVSKYDGHANTKLRRGKKLNAICAASVSTACRELQLSRTLKE 180
Query: 171 ICSVANGATKKEIGRAKEFIVKQLEV-EMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKA 229
I VANG KK+I + I + LE + S I+ G+ +RRFCS L ++ + + A
Sbjct: 181 IAEVANGVDKKDIRKESLVIKRVLESHQTSVSASQAIINTGELVRRFCSKLDISQREIMA 240
Query: 230 AQEAVQRSEELDIRRSPISIAAAVIYMITQLSD-DKKPLKDISLATGVAEGTIRNSYKDL 288
EAV+++E DIRR+P S+ AA+I+MI+ +S ++KP+++I + V E TI+NS KD+
Sbjct: 241 IPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPIREIGIVAEVVENTIKNSVKDM 300
Query: 289 YPYASRLIPNTYAKEEDL 306
YPYA ++IPN YA E D+
Sbjct: 301 YPYALKIIPNWYACESDI 318
>AT3G57370.1 | chr3:21226839-21228475 REVERSE LENGTH=361
Length = 360
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 180/365 (49%), Gaps = 71/365 (19%)
Query: 6 CPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVGGPTNP 65
C CK+ V DH T C CGL + + + S ++ND VR+ PTN
Sbjct: 9 CRRCKQ-INVVTDHVTRRTRCFGCGLEFKYRPIGDLSP-------VAENDTVRLPDPTNT 60
Query: 66 LLTDGGLSTVI-------------------AKP-------------NGAQGEFLS----- 88
LL++ LS V +KP NG+ +FLS
Sbjct: 61 LLSNTDLSIVTTEHKNGSFDDSLSLNLGNSSKPRLDPVSIATAKLMNGSSNDFLSLGTSQ 120
Query: 89 --------------SSLGRWQNRGSNP------DRSLILAFRTIANMADRLGLVATIKDR 128
S LG Q +P + L+ +I +++ L L ATIK +
Sbjct: 121 NSETITASSDEFLFSDLGHLQKFSFDPLSMASTKPNKALSIVSIEAISNGLKLPATIKGQ 180
Query: 129 ANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKE 188
ANEI+K VE RG+ ++ + AAC+YIACR D RT++EI AN A+ +I
Sbjct: 181 ANEIFKVVESYA--RGKERNVLFAACIYIACRDNDMTRTMREISRFANKASISDISETVG 238
Query: 189 FIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL-DIRRSPI 247
FI ++LE+ M +I +F++RFCS ++ +AV+AA EA + + + + RR+P+
Sbjct: 239 FIAEKLEINKNWYM---SIETANFIKRFCSIFRLDKEAVEAALEAAESYDYMTNGRRAPV 295
Query: 248 SIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLK 307
S+AA ++Y+I +LS +K LK + ATGVAE TI+ +Y DLYP ++P +A DLK
Sbjct: 296 SVAAGIVYVIARLSYEKHLLKGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLK 355
Query: 308 NLCTP 312
NL P
Sbjct: 356 NLGAP 360
>AT4G36650.1 | chr4:17283283-17285527 REVERSE LENGTH=504
Length = 503
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 108 AFRTIANMADRLGLVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRT 167
A+ I ++A LGL I + A ++++ +R R+ +A+ ACL A R+ PRT
Sbjct: 133 AYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRT 192
Query: 168 VKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAV 227
++EI S+A +KEIG+ + + + L++ + ++H + RFC+ L +N
Sbjct: 193 LQEI-SIAANVQQKEIGKYIKILGEALQLSQPINSNSISVH----MPRFCTLLQLN---- 243
Query: 228 KAAQEAVQRSEELDI------RRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTI 281
K+AQE E+ I RR+PISI+AA IY+ QL D +K +I TG+ E T+
Sbjct: 244 KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTL 303
Query: 282 RNSYKDLYPYASRLIPNTY 300
R YK+L L+P+ Y
Sbjct: 304 RKVYKELLENWDDLLPSNY 322
>AT4G10680.1 | chr4:6587521-6588069 FORWARD LENGTH=183
Length = 182
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 24/192 (12%)
Query: 3 DSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVGGP 62
D C +CK+ TE ++ GDT+C ECG V+E + +D+ G
Sbjct: 4 DGICLECKRPTETVVNYKNGDTICIECGHVIENNIIDDLD-----------------GAS 46
Query: 63 TNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQN---RGSNPDRSLILAFRTIANMADRL 119
TNP L G L T+I K +G + L+S L R QN + + + +A+ I M + L
Sbjct: 47 TNPNLKSGHLPTIIFKLSG-KSSSLASKLRRTQNEMIKNKQEEDVIKIAYAEIERMTEAL 105
Query: 120 GLVATIKDRANEIYKKVEDLKSIR-GRNQDAILAACLYIACRQEDRPRTVKEICSVANGA 178
GL I + A +I K+ D K++R G++ + AA + ACRQ + P+T+KEI +VAN
Sbjct: 106 GLTFGISNTACKILSKL-DKKNLRGGKSLRGLCAASVSRACRQVNIPKTLKEISAVAN-V 163
Query: 179 TKKEIGRAKEFI 190
KEI +A + +
Sbjct: 164 DMKEINKAVKLL 175
>AT5G39230.1 | chr5:15709474-15709925 FORWARD LENGTH=120
Length = 119
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 6 CPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSV 38
C DCKK T+ D+ +GDT+CTECGL+L++H +
Sbjct: 6 CLDCKKRTDTVIDYRSGDTICTECGLILDSHYI 38
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.131 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,705,426
Number of extensions: 265750
Number of successful extensions: 765
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 753
Number of HSP's successfully gapped: 7
Length of query: 312
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 214
Effective length of database: 8,419,801
Effective search space: 1801837414
Effective search space used: 1801837414
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)