BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0530000 Os09g0530000|AK062568
         (229 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27700.1  | chr4:13826541-13827673 REVERSE LENGTH=225          271   3e-73
AT5G66040.1  | chr5:26410557-26411139 FORWARD LENGTH=121           54   9e-08
AT2G17850.1  | chr2:7760005-7760787 REVERSE LENGTH=157             51   4e-07

>AT4G27700.1 | chr4:13826541-13827673 REVERSE LENGTH=225
          Length = 224

 Score =  271 bits (692), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 127/182 (69%), Positives = 150/182 (82%)

Query: 48  RSLQITCTATKPAKSPAEEEWKIKRQVLVEKRVRSVDVKEALRLQKENNFAILDVRPVAD 107
           ++L+I CT+TKPAK  AE +W+ KR++L+EKRVRSVDVKEA RLQKENNF ILDVRP A+
Sbjct: 42  KTLKIQCTSTKPAKPAAEVDWRQKRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAE 101

Query: 108 FKEAHPPGAVNVQIYRLIKEWTAWDXXXXXXXXXXXXXSGTEENPEFIQSVDEKLGKDAK 167
           +K  HPPGA+NV++YRLI+EWTAWD             SGTEENPEFIQSV+ KL K+AK
Sbjct: 102 YKAGHPPGAINVEMYRLIREWTAWDIARRLGFAFFGIFSGTEENPEFIQSVEAKLDKEAK 161

Query: 168 IIVACSTGGTLKPTQNFPDGKQSRSLIAAYLLVLNGYKNVFHLDGGLYTWFKEGLPAVEG 227
           IIVACS+ GT+KPTQN P+G+QSRSLIAAYLLVLNGYKNVFHL+GG+YTW KEGLP    
Sbjct: 162 IIVACSSAGTMKPTQNLPEGQQSRSLIAAYLLVLNGYKNVFHLEGGIYTWGKEGLPVETI 221

Query: 228 EE 229
           EE
Sbjct: 222 EE 223



>AT5G66040.1 | chr5:26410557-26411139 FORWARD LENGTH=121
          Length = 120

 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 33/124 (26%)

Query: 100 LDVRPVADFKEAHPPGAVNVQIYRLIKEWTAWDXXXXXXXXXXXXXSGTEENPEFIQSVD 159
           LDVR   +F + H  GA+NV                          SG  +NP+F++ V 
Sbjct: 27  LDVRTPEEFSQGHACGAINVPYMN-------------------RGASGMSKNPDFLEQVS 67

Query: 160 EKLGKDAKIIVACSTGGTLKPTQNFPDGKQSRSLIAAYLLVLNGYKNVFHLDGGLYTWFK 219
              G+   IIV C +GG              RS+ A   L+  G+  V  + GG   W K
Sbjct: 68  SHFGQSDNIIVGCQSGG--------------RSIKATTDLLHAGFTGVKDIVGGYSAWAK 113

Query: 220 EGLP 223
            GLP
Sbjct: 114 NGLP 117



>AT2G17850.1 | chr2:7760005-7760787 REVERSE LENGTH=157
          Length = 156

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 33/154 (21%)

Query: 77  EKRVRSVDVKEALRLQKENNFAILDVRPVADFKEAHPPGAVNVQIYRLIKEWTAWDXXXX 136
           E +V ++DV +A +L  ++ +  LDVR V +FK+ H    V+ +    +  W        
Sbjct: 29  EPKVITIDVNQAQKLL-DSGYTFLDVRTVEEFKKGH----VDSENVFNVPYW-------- 75

Query: 137 XXXXXXXXXSGTEENPEFIQSVDEKLGKDAKIIVACSTGGTLKPTQNFPDGKQSRSLIAA 196
                     G E NP F++ V     +   +I+ C +G               RSL A 
Sbjct: 76  -----LYTPQGQEINPNFLKHVSSLCNQTDHLILGCKSG--------------VRSLHAT 116

Query: 197 YLLVLNGYKNVFHLDGGLYTWFKEGLPA-VEGEE 229
             LV +G+K V ++DGG   W  +  P  VE +E
Sbjct: 117 KFLVSSGFKTVRNMDGGYIAWVNKRFPVKVEHKE 150



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.131    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,893,928
Number of extensions: 182002
Number of successful extensions: 471
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 472
Number of HSP's successfully gapped: 4
Length of query: 229
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 134
Effective length of database: 8,502,049
Effective search space: 1139274566
Effective search space used: 1139274566
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)