BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0529900 Os09g0529900|AK121655
         (348 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10750.1  | chr4:6618724-6619800 FORWARD LENGTH=359            289   2e-78
AT4G24080.1  | chr4:12511384-12512290 FORWARD LENGTH=232          177   7e-45
AT4G24070.1  | chr4:12508895-12509095 FORWARD LENGTH=67            56   2e-08

>AT4G10750.1 | chr4:6618724-6619800 FORWARD LENGTH=359
          Length = 358

 Score =  289 bits (739), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 144/257 (56%), Positives = 174/257 (67%), Gaps = 6/257 (2%)

Query: 64  KSRLAAGETLYGLFLLSFSPTLAELAALAGYDYVVVDMEHGPGGVPEXXXXXXXXXXXXT 123
           KSRL  GETLYGLFLLSFSPTLAE+AA AGYDYVVVDMEHGPGG+PE            T
Sbjct: 81  KSRLRGGETLYGLFLLSFSPTLAEIAAHAGYDYVVVDMEHGPGGIPEALDCIRALNAAGT 140

Query: 124 PAVIRLPEAGPIWAKKALDLGPAGLMXXXXXXXXXXXXXXXHCRYPPRGVRGAAHPIVRA 183
            A++RLPE  P WAKKALDLGP G+M               +CR+PP G+RG+AH +VRA
Sbjct: 141 SAILRLPENSPTWAKKALDLGPQGIMFPMIESRKDATKAVSYCRFPPDGIRGSAHTVVRA 200

Query: 184 SAYGLDDSYLSRCEDETLIICQVETXXXXXXXXXXXXXXXXXXXQMGPLDLSASMGYLWD 243
           S YG+D+ YLS   +E LI+CQVE+                   QMGPLDLSAS+GYLWD
Sbjct: 201 SNYGIDEGYLSNYAEEILIMCQVESGEGVKKADEIAAVDGVDCVQMGPLDLSASLGYLWD 260

Query: 244 PGNRKVRARLREAEKKVLDARKKNVTASDGNVAYLGGFAMPNDPAEQLKLRGYHMVSGAV 303
           PG++KVR  +++AEK VL       T      AYL GFAMP+D A +++ RGYHMV+GAV
Sbjct: 261 PGHKKVREMMKKAEKSVL------TTDPAKGGAYLSGFAMPHDGAGEIRGRGYHMVAGAV 314

Query: 304 DIGMFRKAALEDVKRFK 320
           D+G+FR AA+EDV+RFK
Sbjct: 315 DVGLFRNAAVEDVRRFK 331



>AT4G24080.1 | chr4:12511384-12512290 FORWARD LENGTH=232
          Length = 231

 Score =  177 bits (449), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 102/257 (39%), Positives = 133/257 (51%), Gaps = 34/257 (13%)

Query: 64  KSRLAAGETLYGLFLLSFSPTLAELAALAGYDYVVVDMEHGPGGVPEXXXXXXXXXXXXT 123
           KSRL  GE L G FLLSFSP LAE+AA AG+D++VV +EHG GG+P              
Sbjct: 8   KSRLQDGEKLLGHFLLSFSPELAEIAARAGFDFIVVYLEHGAGGIP-------------- 53

Query: 124 PAVIRLPEAGPIWAKKALDLGPAGLMXXXXXXXXXXXXXXXHCRYPPRGVRGAAHPIVRA 183
                         KKALDLGP G+M                C Y P GVRG A+ +VR 
Sbjct: 54  --------------KKALDLGPDGIMFPMVETGRSASEAVSFCLYRPDGVRGCAYSVVRD 99

Query: 184 SAYGLDDSYLSRCEDETLIICQVETXXXXXXXXXXXXXXXXXXXQMGPLDLSASMGYLWD 243
           S++G ++ YL    D+  I+CQ+E+                    MGP DLSAS+G L D
Sbjct: 100 SSFGFNEGYLGNYADKLFIMCQIESEEGMKNVKEIIAVDGMDCVMMGPRDLSASLGLLND 159

Query: 244 PGNRKVRARLREAEKKVLDARKKNVTASDGNVAYLGGFAMPNDPAEQLKLRGYHMVSGAV 303
           PGN KV++ +R AE  VL +   N        AYL G A   D    LK RGYH+V G+ 
Sbjct: 160 PGNPKVKSVMRVAETAVLASDPAN------GGAYLAGMATAQDKTGDLKARGYHVVLGST 213

Query: 304 DIGMFRKAALEDVKRFK 320
           D+ +++KA +++V  FK
Sbjct: 214 DVSLYKKAVVDEVNAFK 230



>AT4G24070.1 | chr4:12508895-12509095 FORWARD LENGTH=67
          Length = 66

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 6/68 (8%)

Query: 253 LREAEKKVLDARKKNVTASDGNVAYLGGFAMPNDPAEQLKLRGYHMVSGAVDIGMFRKAA 312
           +R AE  VL +   N        AYL G A   D A  LK RGYHM+ GA D+ +F+KA 
Sbjct: 1   MRVAETAVLGSDPAN------GGAYLAGMATAQDKAVDLKSRGYHMILGATDVPLFKKAV 54

Query: 313 LEDVKRFK 320
           ++DVK FK
Sbjct: 55  VDDVKSFK 62



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.137    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,760,652
Number of extensions: 153283
Number of successful extensions: 304
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 299
Number of HSP's successfully gapped: 4
Length of query: 348
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 249
Effective length of database: 8,392,385
Effective search space: 2089703865
Effective search space used: 2089703865
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)