BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0529100 Os09g0529100|AK069696
(269 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G24400.1 | chr5:8330532-8331784 REVERSE LENGTH=326 360 e-100
AT3G49360.1 | chr3:18303189-18304283 REVERSE LENGTH=260 279 9e-76
AT5G24420.1 | chr5:8336943-8337879 REVERSE LENGTH=253 275 2e-74
AT5G24410.1 | chr5:8332690-8333984 REVERSE LENGTH=262 270 7e-73
AT1G13700.1 | chr1:4694475-4695600 REVERSE LENGTH=269 257 4e-69
>AT5G24400.1 | chr5:8330532-8331784 REVERSE LENGTH=326
Length = 325
Score = 360 bits (924), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/254 (67%), Positives = 206/254 (81%), Gaps = 4/254 (1%)
Query: 13 GSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPY 72
G ++KK V I+D EE+L + LAK+TA+LS K ERGAFTVV+SGGSLIK++RKL E PY
Sbjct: 76 GKEEKKRVEIYDLEENLVIDLAKFTADLSDKFCKERGAFTVVVSGGSLIKSLRKLVESPY 135
Query: 73 LDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAAD 132
+DS+DW++WH FWVDERVVPK+H+DSNYKLA D FLSKVPIP G VYAIN+ALSAE AAD
Sbjct: 136 VDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAAD 195
Query: 133 DYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIK 192
DYETCLK LV ++ +S+STGFP+FD+MLLGMGPDGH+ASLFPGH L NE+KKWV I
Sbjct: 196 DYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSIS 255
Query: 193 DSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDG 252
DSPKPP ERITFTFPVINSSA+VA+VV G+GKA AV+ AL K+T + +P +V +
Sbjct: 256 DSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAAL--KKTGN--VPPAGSVSAED 311
Query: 253 EFTWFTDKPAVSML 266
E WF DKPA S L
Sbjct: 312 ELVWFLDKPASSKL 325
>AT3G49360.1 | chr3:18303189-18304283 REVERSE LENGTH=260
Length = 259
Score = 279 bits (714), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 170/249 (68%), Gaps = 9/249 (3%)
Query: 22 IFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKW 81
+F ++AV LAKYTA+LS+K ERG FTVVLSGG LI + KL E PY+DS++WSKW
Sbjct: 8 VFKTNNEMAVELAKYTADLSSKFCKERGVFTVVLSGGDLIAWLWKLLEAPYIDSIEWSKW 67
Query: 82 HVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEG----AADDYETC 137
H+FWVDERV DH DSNYKLA DGFLSKVP+P +YAI++ L AEG AA+ YE C
Sbjct: 68 HIFWVDERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAELAAERYEEC 127
Query: 138 LKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKP 197
LKQ V +I +S+GFP+FD+ LLGMGPDGH+ASLFPGH +NE KWVT I DSPKP
Sbjct: 128 LKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKP 187
Query: 198 PPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWF 257
P +RIT T PVIN ++Y M V +A +V AL+ + LP + D E WF
Sbjct: 188 PSKRITLTLPVINCASYNVMAVCDKEQADSVAAALNHTKD----LPAGR-LTADVEVVWF 242
Query: 258 TDKPAVSML 266
D+ A S L
Sbjct: 243 LDQAAASKL 251
>AT5G24420.1 | chr5:8336943-8337879 REVERSE LENGTH=253
Length = 252
Score = 275 bits (702), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/254 (52%), Positives = 176/254 (69%), Gaps = 8/254 (3%)
Query: 17 KKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSV 76
++++++F + +L+ ++A+YTA LSAK E+G FTVVLSGG LI + KL +PPY+DS+
Sbjct: 3 QRKMIVFPTKNELSEAMAEYTANLSAKFIKEKGLFTVVLSGGDLIDWLCKLVQPPYIDSI 62
Query: 77 DWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADD--- 133
+W KWHVFWVDERV + DSNYKLA++GFLSKVPIP +YAI+ L+A+G A+
Sbjct: 63 EWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAEHCAT 122
Query: 134 -YETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIK 192
YE CLK LVK +I +S+ TG+P FD+ LLGMGPDGH+ASLFP HP +NE +KWVTYI
Sbjct: 123 LYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYIT 182
Query: 193 DSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDG 252
DSPKPPP+RITFT PVINS+ Y M + A +V + + S LP Q
Sbjct: 183 DSPKPPPKRITFTLPVINSTLYNLMAICDKAPAKSVAEIMKHNNLS---LPSAHLSAQ-V 238
Query: 253 EFTWFTDKPAVSML 266
E W+ D+ A S L
Sbjct: 239 ENVWYLDQAAASEL 252
>AT5G24410.1 | chr5:8332690-8333984 REVERSE LENGTH=262
Length = 261
Score = 270 bits (690), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 137/256 (53%), Positives = 171/256 (66%), Gaps = 9/256 (3%)
Query: 15 KKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLD 74
K K + ++F +++L+ ++A YTA LSAK ERG FTVVLSGG LI + +L EP Y +
Sbjct: 7 KTKSKKIVFPTKKELSEAMATYTANLSAKFCKERGYFTVVLSGGDLISWLSELLEPKYQE 66
Query: 75 SVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEG----A 130
S++WSKWH+FWVDERVVP DHEDSNYKLA DGFLSKVPIP +Y I+ +A G A
Sbjct: 67 SIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAKSA 126
Query: 131 ADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTY 190
A YE CLK+LV +I +S+GFP+FD+ LLGMGPDGH+ASLFPGH + E VTY
Sbjct: 127 ALLYEECLKRLVNRNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHYQIKEKANLVTY 186
Query: 191 IKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQ 250
I DSPKPPP+RITFT PVIN ++Y M V +A AV K + LP +
Sbjct: 187 ITDSPKPPPKRITFTLPVINCASYNLMAVCDEAQADAVAKVFNHNFD----LPAAW-LTA 241
Query: 251 DGEFTWFTDKPAVSML 266
D E WF D+ A S +
Sbjct: 242 DVEAIWFLDQAAASKI 257
>AT1G13700.1 | chr1:4694475-4695600 REVERSE LENGTH=269
Length = 268
Score = 257 bits (657), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/254 (50%), Positives = 168/254 (66%), Gaps = 2/254 (0%)
Query: 15 KKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLD 74
K + E+ + + E+L++ L Y AE+S E GAF +VLSGGSLI + KL EPPY
Sbjct: 8 KDRGEIRVHENLEELSIDLVDYIAEISEASIKEHGAFCIVLSGGSLISFMGKLIEPPYDK 67
Query: 75 SVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDY 134
VDW+KW+VFW DERVV K+H+DSNYKLA D LSKV + + +IND +SAE AA +Y
Sbjct: 68 IVDWAKWYVFWADERVVAKNHDDSNYKLAKDNLLSKVNVFPRHICSINDTVSAEEAATEY 127
Query: 135 ETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDS 194
E ++Q+V++ +A S ++ PRFD++LLGMG DGH+ASLFP HP + WVT++ DS
Sbjct: 128 EFAIRQMVRSRTVAASDNSDSPRFDLILLGMGSDGHVASLFPNHPALEVKDDWVTFLTDS 187
Query: 195 PKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQT--SSDLLPVEMAVLQDG 252
KPPPERITFT PVINS+A V +V TG KA A+ A+ D SS LP + +G
Sbjct: 188 HKPPPERITFTLPVINSAANVVVVATGESKANAIHLAIDDLPLPDSSLSLPARLVHPSNG 247
Query: 253 EFTWFTDKPAVSML 266
WF DK A S L
Sbjct: 248 NLIWFMDKQAGSKL 261
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.132 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,038,252
Number of extensions: 257499
Number of successful extensions: 765
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 761
Number of HSP's successfully gapped: 5
Length of query: 269
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 172
Effective length of database: 8,447,217
Effective search space: 1452921324
Effective search space used: 1452921324
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)