BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0527100 Os09g0527100|AK073499
         (149 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76940.1  | chr1:28902707-28904085 REVERSE LENGTH=234          114   1e-26
AT1G21320.1  | chr1:7462834-7465200 REVERSE LENGTH=422            105   1e-23
AT2G42240.2  | chr2:17596844-17598911 FORWARD LENGTH=303           49   8e-07
AT2G47580.1  | chr2:19517229-19518686 FORWARD LENGTH=251           47   3e-06

>AT1G76940.1 | chr1:28902707-28904085 REVERSE LENGTH=234
          Length = 233

 Score =  114 bits (286), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)

Query: 50  SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRH-AGSCNLLCFVDFSSPPEAR 108
           S TLYVEGLPSNC++REVAHIFRPF G+REVRLV K+S+H  G   +LCFVDF++P  A 
Sbjct: 135 SNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAA 194

Query: 109 AALETLQGYKFDEHDHESSNLRTQFSLTPRRR 140
            AL  LQGY+ DE++ +S  LR QFS  P  R
Sbjct: 195 TALSALQGYRMDENESDSKFLRLQFSRKPGSR 226



>AT1G21320.1 | chr1:7462834-7465200 REVERSE LENGTH=422
          Length = 421

 Score =  105 bits (261), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 1/92 (1%)

Query: 50  SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRH-AGSCNLLCFVDFSSPPEAR 108
           S TLYVEGLPSNC++REV+HIFRPF G+REVRLV ++S+H +G   +LCFVDF +   A 
Sbjct: 322 SNTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAA 381

Query: 109 AALETLQGYKFDEHDHESSNLRTQFSLTPRRR 140
            AL  LQ Y+ DE + +S  LR QF   P  R
Sbjct: 382 TALSALQDYRMDEDEPDSKILRLQFFRNPGPR 413



>AT2G42240.2 | chr2:17596844-17598911 FORWARD LENGTH=303
          Length = 302

 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 5/108 (4%)

Query: 34  YSVGMDSGIHGATRTESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSC 93
           +SV + + +    R E RTL+V GLP +   RE+ ++FR F G+    L     R +   
Sbjct: 33  HSVYLPTHVSIGARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHL-----RSSDGA 87

Query: 94  NLLCFVDFSSPPEARAALETLQGYKFDEHDHESSNLRTQFSLTPRRRS 141
               F  FS    A A +  L G  FD   H + ++    S    +RS
Sbjct: 88  KPFAFAVFSDLQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRS 135



>AT2G47580.1 | chr2:19517229-19518686 FORWARD LENGTH=251
          Length = 250

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 11/119 (9%)

Query: 7   HHLNDQLQM---SYVAGTNQSAIPLGGMARYSVGMDSGIHGATRTESRTLYVEGLPSNCT 63
           HH + Q+ M   S   G   +A PL  +  Y  GM   +  A    +  L+V+ LP   T
Sbjct: 131 HHDSTQMGMPMNSAYPGVYGAAPPLSQVP-YPGGMKPNMPEAPAPPNNILFVQNLPHETT 189

Query: 64  KREVAHIFRPFSGFREVRLVNKESRHAGSCNLLCFVDFSSPPEARAALETLQGYKFDEH 122
              +  +F  + GF+EVR++  E++       + FV+F+   ++  A++ LQG+K  ++
Sbjct: 190 PMVLQMLFCQYQGFKEVRMI--EAKPG-----IAFVEFADEMQSTVAMQGLQGFKIQQN 241



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.133    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,274,069
Number of extensions: 122868
Number of successful extensions: 373
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 388
Number of HSP's successfully gapped: 4
Length of query: 149
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 60
Effective length of database: 8,666,545
Effective search space: 519992700
Effective search space used: 519992700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 107 (45.8 bits)