BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0516900 Os09g0516900|AK067607
(612 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G59660.1 | chr3:22034426-22038484 REVERSE LENGTH=595 733 0.0
AT1G02120.1 | chr1:395761-399720 FORWARD LENGTH=599 106 4e-23
AT1G03370.1 | chr1:830968-834996 FORWARD LENGTH=1021 87 3e-17
AT5G50170.1 | chr5:20421150-20425524 FORWARD LENGTH=1028 84 3e-16
>AT3G59660.1 | chr3:22034426-22038484 REVERSE LENGTH=595
Length = 594
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/499 (68%), Positives = 405/499 (81%), Gaps = 2/499 (0%)
Query: 80 KGGSSGPSAYVVKLEXXXXXXXXXXXXXGTSDPYALITCGEEKRFSSMVPGSRNPMWGEE 139
+G + +AY+VK+E GTSDPYA++ CG EKRFSSMVPGSRNPMWGEE
Sbjct: 72 RGDTQTNAAYIVKVELLAAKNLIGANLNGTSDPYAIVNCGSEKRFSSMVPGSRNPMWGEE 131
Query: 140 FNFFVDSLPVKINVTIYDWDIVWKSTVLGSVIVPVESEGQSGPVWYTLDSTSGQVCLHIK 199
FNF D LP KINVTI+DWDI+WKSTVLGSV + VE EGQ+GPVW++LDS SGQVCL+I
Sbjct: 132 FNFPTDELPAKINVTIHDWDIIWKSTVLGSVTINVEREGQTGPVWHSLDSPSGQVCLNIN 191
Query: 200 AIKVHESSSRALNSSAEAGARRRISLDKQGPTVVHQKPSHLQTIFGLPPDEVVEHSYSCA 259
AIK+ ++ RA+ A AG RRR++LD+QGPT+VHQKP LQTIF L PDEVVEHSYSCA
Sbjct: 192 AIKLPVNAPRAVTGYAGAG-RRRVTLDQQGPTIVHQKPGPLQTIFDLLPDEVVEHSYSCA 250
Query: 260 LERSFLYHGRMYVSSWHICFHSNVFSKQIKVMLPLRDIDEIRRSQHAVINPAITIFLRMG 319
LERSFLYHGRMYVS+WHICFHSNVFSKQ+KV++PL DIDEIRRSQHA+INPAITI LRMG
Sbjct: 251 LERSFLYHGRMYVSAWHICFHSNVFSKQMKVVVPLGDIDEIRRSQHALINPAITIILRMG 310
Query: 320 AGGHGVPPLGSPDGRVRYKFASFWNRNHTFRALQRAVKNFHTMIEAEKQERAQSALRAHS 379
AGGHGVPPLG+PDGRVRYKFASFWNRNHT +ALQRAV N+H M+E EK+ERAQSALRAHS
Sbjct: 311 AGGHGVPPLGTPDGRVRYKFASFWNRNHTLKALQRAVNNYHAMLEVEKKERAQSALRAHS 370
Query: 380 SSRKSSMK-EINVPEDCADLTGQLQPFVKEEVLVTVFNGSFPCTAEEFFNTLLSDDSSYI 438
SS K K ++ PED A + + Q F+KEEVLV ++N F T E+ N LL+DDS+Y
Sbjct: 371 SSVKGGGKVQVKAPEDTAAVPVKFQAFIKEEVLVNIYNDVFASTPEQVLNVLLADDSTYT 430
Query: 439 TEFRTARKDKDINLGQWHHADEYDGQVRELNCKSICHSPMCPPYSAMTEWQHMVLSADKT 498
E+R+ARKDK++N+ WH A+EYDGQVRE+ +SIC+SPMCPP +A+TEWQH+VLS DK
Sbjct: 431 NEYRSARKDKNLNIEPWHTAEEYDGQVREIKFRSICNSPMCPPDTAVTEWQHVVLSPDKK 490
Query: 499 DLVFETVQQVHDVPFGSFFEVHCRWSVKTTSSDSCSLNISAGAHFKKWCIMQSKIKSGAV 558
LVFETVQQ HDVPFGS+FEVHCRW ++ S ++I G HFKKWC+MQSKIK+GA+
Sbjct: 491 VLVFETVQQPHDVPFGSYFEVHCRWRLEAKDETSSVIDIRVGVHFKKWCLMQSKIKAGAI 550
Query: 559 DEYKKEVQEMLEFAESYMR 577
DEYKKEV+ MLE A SY++
Sbjct: 551 DEYKKEVEVMLEVALSYLK 569
>AT1G02120.1 | chr1:395761-399720 FORWARD LENGTH=599
Length = 598
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 167/424 (39%), Gaps = 72/424 (16%)
Query: 233 VHQKPSHLQTIFGLPPDEVVEHSYSCALERSFLYHGRMYVSSWHICFHSNVFSKQIKVML 292
V K + +F LP DE++ ++CA + S L G MY+ +ICF+SN+F + K ++
Sbjct: 65 VISKSEEYRQLFRLPADEILVQDFNCACQESILMQGHMYLFIHYICFYSNIFGYETKKII 124
Query: 293 PLRDIDEIRRSQHAVINP-AITIFLRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHTFRA 351
P +I ++R++ A I P AI I AGG +Y FASF +R+ F+
Sbjct: 125 PFAEISCVKRAKTAGIFPNAIEIL----AGGK------------KYFFASFLSRDEAFKL 168
Query: 352 LQ-------RAVKNFHTMIEAEKQERAQSALRAHSSSRKSSMKEINVP---EDCADLTGQ 401
+ AVK+ ++ E Q RA SS ++ E+++P E +
Sbjct: 169 IHDGWLEYGSAVKSEGEILVTEPQVSDGVVKRARSSMDLAN--ELDIPVRDETLHLSSSS 226
Query: 402 LQPFVKEE-----------------VLVTVFN--------------------GSFPCTAE 424
P + + V FN F E
Sbjct: 227 SLPVISQNGVPPSSVQRHAEPDVDVVAANTFNWKPEDTDAPKLSSDFTKVAEAKFSIPVE 286
Query: 425 EFFNTLLSDDS-SYITEFRTARKDKDINLGQWHHADEYDGQVRELNCKSICHSPMCPPYS 483
EFF SD + S++ F DK+ W E G R ++ + +
Sbjct: 287 EFFRLFFSDGAVSFVESFHKNCGDKEFRCTSW-QPHEKLGHTRNVSFQHPIKIYFGAKFG 345
Query: 484 AMTEWQHMVLSADKTDLVFETVQQVHDVPFGSFFEVHCRWSVKTTSSDS---CSLNISAG 540
E Q + + + LV ET Q++ DVP+ +F V W +K DS C L++
Sbjct: 346 GCQESQKFRMYRN-SHLVIETSQEISDVPYADYFTVEGVWDLKRDCRDSVEGCILDVYVN 404
Query: 541 AHFKKWCIMQSKIKSGAVDEYKKEVQEMLEFAESYMRKVRTSNQDNGTPTEQDNGAVTEQ 600
F K + + KI ++E ++ + A +++ + NQ+ E +
Sbjct: 405 VAFSKRTVWKGKIVQSTLEECREAYAHWIRMAHELLKQKKLENQEGNKLIEDGEPLAARE 464
Query: 601 ENVA 604
E V+
Sbjct: 465 ERVS 468
>AT1G03370.1 | chr1:830968-834996 FORWARD LENGTH=1021
Length = 1020
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 190/460 (41%), Gaps = 88/460 (19%)
Query: 108 GTSDPYALITCGEEKRFSSMVPGSRNPMWGEEFNFFVDSL---PVKINVTIYDWDIVWKS 164
G DPY + T + R SS+ NP W E F F D++ P +NV ++D+D +
Sbjct: 554 GHCDPYIVFTSNGKTRTSSIKFQKSNPQWNEIFEF--DAMADPPSVLNVEVFDFDGPFDE 611
Query: 165 TV-LGSVIVPVESEGQS--GPVWYTLDSTSGQVC---LHIKAIKVHESSS---RALNSSA 215
V LG V S VW L Q C LH++ H R +
Sbjct: 612 AVSLGHAEVNFVRSNISDLADVWVPLQGKLAQACQSKLHLRIFLDHTGGGDVVRDYLNKM 671
Query: 216 EAGARRRISLDKQGPTVVHQKPSHLQTIFGLPPDEVVEHSYSCALERSFLYHGRMYVSSW 275
E ++I++ + P Q S Q +FGLP +E + + ++C L+R GR+++S+
Sbjct: 672 EKEVGKKINV--RSP----QTNSAFQKLFGLPQEEFLINDFTCHLKRKMPLQGRLFLSAR 725
Query: 276 HICFHSNVFSKQIKVMLPLRDIDEIRR---SQHAVINPAITIFL--------RMGAGGHG 324
+ F++++F + K DI+EI+ + ++ +P + + L R+GA H
Sbjct: 726 IVGFYASIFGNKTKFFFLWEDIEEIQVLPPTLASMGSPIVVMTLRPNRGLDARIGAKTH- 784
Query: 325 VPPLGSPDGRVRYKFASFWNRN---HTFRALQRAV----KNFHTMIEAEKQERAQS---- 373
+GR+++ F SF + N T AL +A + +E E +++ QS
Sbjct: 785 -----DEEGRLKFHFHSFVSFNVAQKTIMALWKAKSLTPEQKVQAVEEESEQKLQSEESG 839
Query: 374 ALRAHSSSRKSSMKEINVPEDCA---DLTGQLQPFVKEEVLVTVFNGSFPCTAEEFFNTL 430
R S + + +P + +L G + V + + S+ C+ E
Sbjct: 840 LFLGVDDVRFSEVFSLTLPVPVSFFMELFGGGE--VDRKAMERAGCQSYSCSPWE----- 892
Query: 431 LSDDSSYITEFRTARKDKDINLGQWHHADEYDGQVRELNCKSICHSPMCPPYSAMTEWQH 490
+ + E +T +DK I+ Y G+V T Q
Sbjct: 893 --SEKDDVYERQTYYRDKRIS--------RYRGEV--------------------TSTQQ 922
Query: 491 MVLSADKTDLVFETVQQVHDVPFGSFFEVHCRWSVKTTSS 530
L +K + E V +H VP G +F +H R+ ++ ++S
Sbjct: 923 KSLVPEKNGWLVEEVMTLHGVPLGDYFNLHLRYQMEESTS 962
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 108 GTSDPYALITCGEEKRFSSMVPGSRNPMWGEEFNFFVDSLPVKINVTIYDWDIVWKSTVL 167
G SDPY + G+++ + +V + NP W E+F+F VD L ++ V++ D D + +
Sbjct: 20 GFSDPYVRLQLGKQRSRTKVVKKNLNPKWTEDFSFGVDDLNDELVVSVLDEDKYFNDDFV 79
Query: 168 GSVIVPV----ESEGQS-GPVWYTLD 188
G V V V ++E QS G VWY L+
Sbjct: 80 GQVRVSVSLVFDAENQSLGTVWYPLN 105
>AT5G50170.1 | chr5:20421150-20425524 FORWARD LENGTH=1028
Length = 1027
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 174/450 (38%), Gaps = 68/450 (15%)
Query: 111 DPYALITCGEEKRFSSMVPGSRNPMWGEEFNF-FVDSLPVKINVTIYDWDIVW-KSTVLG 168
DPY + TC + R SS+ +++P W E F ++ P ++V ++D+D + + LG
Sbjct: 561 DPYVVFTCNGKTRTSSVKLQAQDPQWNEVIEFDAMEEPPSVLDVEVFDFDGPFDQGASLG 620
Query: 169 SVIVPV--ESEGQSGPVWYTLDSTSGQVCLHIKAIKVHESSSRALNSSAEAGARRRISLD 226
+ + + + L Q +++ + + + + ++ +
Sbjct: 621 HAEINFLKHTADELADLSVALVGNHAQASQSKLQLRIFLENKNGVETMKDYLSKVEKEVG 680
Query: 227 KQGPTVVHQKPSHLQTIFGLPPDEVVEHSYSCALERSFLYHGRMYVSSWHICFHSNVFSK 286
K+ QK S Q +FGLP +E + Y+C L+R G++++S+ + F+SNVF
Sbjct: 681 KKLNIRSPQKNSAFQKLFGLPHEEFLLKEYTCYLKRKLPVQGKLFLSARIVAFYSNVFGH 740
Query: 287 QIKVMLPLRDIDEIRR---SQHAVINPAITIFLRMGAG---GHGVPPLGSPDGRVRYKFA 340
+ K DID+I+ + ++ +P + I L+ G HG +GR+ + F
Sbjct: 741 KTKFYFLWEDIDDIQVLPPTFASLGSPLLLIILKKNRGLDAKHGAKS-QDDEGRLSFYFQ 799
Query: 341 SFWNRNHTFRALQRAVKNFHTMIEAEKQERAQSALRAHSSSRKSSMKEINVPEDCADLTG 400
SF + + T R + K R S ++ + E + +D AD
Sbjct: 800 SFVSFDATSRTIMALWKT-----------------RTLSVDHRAQIVEED--QDVAD--- 837
Query: 401 QLQPFVKEEVLVT-----------VFNGSFPCTAEEFFNTL--------LSDDSSYITEF 441
PF+ E + V+ PC E + + S ++
Sbjct: 838 ---PFLLPEAVTVVSDADALMMSKVYTCDLPCDVELVMKIFGGGELERKIMEKSGCLSYA 894
Query: 442 RTARKDKDINLGQWHHADEYDGQVRELNCKSICHSPMCPPYSAMTEWQHMVLSADKTDLV 501
T + K + + + +Y+ V C P + + +
Sbjct: 895 STTWESKKPGVYERRLSYKYNHYVSVFGGGVTCAQQKSP-------------APNDEGWI 941
Query: 502 FETVQQVHDVPFGSFFEVHCRWSVKTTSSD 531
+ +HDVPFG F VH R+ VK D
Sbjct: 942 LNEIVALHDVPFGDHFRVHIRYEVKKAGVD 971
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.132 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,405,675
Number of extensions: 503903
Number of successful extensions: 1344
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1347
Number of HSP's successfully gapped: 6
Length of query: 612
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 508
Effective length of database: 8,255,305
Effective search space: 4193694940
Effective search space used: 4193694940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)