BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0516700 Os09g0516700|AK072458
(463 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08760.1 | chr1:2805478-2808409 FORWARD LENGTH=749 324 5e-89
AT3G14170.1 | chr3:4696115-4697989 REVERSE LENGTH=506 176 2e-44
AT4G13370.1 | chr4:7777916-7780334 REVERSE LENGTH=674 167 8e-42
AT1G23790.1 | chr1:8410099-8411917 FORWARD LENGTH=519 159 2e-39
AT1G70340.1 | chr1:26504567-26506389 REVERSE LENGTH=511 154 7e-38
AT3G19610.1 | chr3:6812493-6814660 REVERSE LENGTH=641 142 3e-34
AT2G31920.1 | chr2:13574053-13576367 REVERSE LENGTH=586 116 2e-26
>AT1G08760.1 | chr1:2805478-2808409 FORWARD LENGTH=749
Length = 748
Score = 324 bits (831), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 206/465 (44%), Positives = 281/465 (60%), Gaps = 23/465 (4%)
Query: 1 MASLVPGVLVKLLQHMNTDVKVAGEHRSSLLQVVSIVPALAGSDLFTNQGFYLKVSDSSH 60
MA+LVPGVL+KLLQHMNTDVK+AGEHRSSLLQV+SIVPALAG +LF NQGFYLKVSDSSH
Sbjct: 1 MANLVPGVLLKLLQHMNTDVKIAGEHRSSLLQVISIVPALAGGELFPNQGFYLKVSDSSH 60
Query: 61 ATYVSLPEDQHDLILSDKIQLGQFIHVDRLEAATPVPILRGVRPVPGRHACVGNPEDLVV 120
ATYVSLP++ DLILSDKIQLGQ+IHVDR+E+++PVPILRGVRPVPGRH CVG+PED+V
Sbjct: 61 ATYVSLPDEHDDLILSDKIQLGQYIHVDRVESSSPVPILRGVRPVPGRHPCVGDPEDIVA 120
Query: 121 TSSSNFLGNKKAQPTN--GLKTTNGLKTTNGLKDTXXXXXXXXXXXXXXINASHKTIGAE 178
T S FL + K + N G+ + + +K + + ++
Sbjct: 121 THSLGFLSDDKVKNDNNGGVSSKPKERVKASVKANGSGSDGERIIGNRLSVSISRDDSSD 180
Query: 179 NKKPMLTKSNSSLSKQALNGLGDKKEAIKSKAKPAGTRSTPSSPTSVYSLPASFDRFSND 238
KKP+ + +K +L+ L KKE++ +G++S PSSPTS YSLP SF +F+N
Sbjct: 181 GKKPVSALFRAKSAKSSLS-LDVKKESLGKLKTSSGSKSIPSSPTSCYSLPNSFAKFANG 239
Query: 239 LKQRNKVKGA--EKASSSRLSLLEKAASVLKVTT--AGRKXXXXXXXXXXXXXXXPKALR 294
+KQ+ VK EK S R+ L EK S+LK + G+K KALR
Sbjct: 240 IKQQQTVKPKLLEKG-SPRMGLSEKGRSLLKAESPKVGKKLPMIKNFVQGIEFGA-KALR 297
Query: 295 RSWEGKVDTKGKTNSDSKMTKLEKKPENRGTMATIPRRK------PPVDEKVQ-----HK 343
+SWEG +D +G + S + + + P++R A PRR P E+ K
Sbjct: 298 KSWEGNLDIRGSDRTKSSLPRRDLTPDSRSLAA--PRRSTSSEKLPSKQERANVFARSSK 355
Query: 344 DDSKLQNPAKKTTANAPSDDADKAMKKHPPTVKRTSGISNPNVTNLVEVPPNSKKLTDAS 403
+ +K+Q+ KK A D DK + +V++ S N NLV+V N K+L A+
Sbjct: 356 EHNKIQS-TKKVEPTAVLDTKDKTSRPKSTSVEKKSVAENGLPGNLVKVSVNGKRLAAAN 414
Query: 404 NSWTTLPPSLAKLGKELLKYRESAQMXXXXXXXXXXXXXSLLRCL 448
W++LPPSL+++G+E+L++RE+AQ+ SLL+CL
Sbjct: 415 IQWSSLPPSLSRMGQEVLRHREAAQVVAIEALQEASASESLLQCL 459
>AT3G14170.1 | chr3:4696115-4697989 REVERSE LENGTH=506
Length = 505
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 103/119 (86%)
Query: 1 MASLVPGVLVKLLQHMNTDVKVAGEHRSSLLQVVSIVPALAGSDLFTNQGFYLKVSDSSH 60
MASL P VL+KLL+ MNT++KV GE+RS LLQV+SIVPALAGS+L+ NQGF++KVSDSSH
Sbjct: 1 MASLTPRVLIKLLETMNTNIKVRGEYRSVLLQVISIVPALAGSELWPNQGFFIKVSDSSH 60
Query: 61 ATYVSLPEDQHDLILSDKIQLGQFIHVDRLEAATPVPILRGVRPVPGRHACVGNPEDLV 119
+TYVSL + ++LIL++K+ +GQF +VD+L+A TPVP+L GVRP+ GRH VGNP+DL+
Sbjct: 61 STYVSLSNEDNELILNNKLGIGQFFYVDKLDAGTPVPVLVGVRPISGRHPFVGNPKDLM 119
>AT4G13370.1 | chr4:7777916-7780334 REVERSE LENGTH=674
Length = 673
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 76/119 (63%), Positives = 97/119 (81%)
Query: 1 MASLVPGVLVKLLQHMNTDVKVAGEHRSSLLQVVSIVPALAGSDLFTNQGFYLKVSDSSH 60
MASL PG+L+KLLQ MN+ + G+HRS++LQV IVPALAGSDL+ NQGFY+++SDS +
Sbjct: 1 MASLAPGILLKLLQCMNSGTRPTGDHRSAILQVTGIVPALAGSDLWPNQGFYVQISDSLN 60
Query: 61 ATYVSLPEDQHDLILSDKIQLGQFIHVDRLEAATPVPILRGVRPVPGRHACVGNPEDLV 119
+TYVSL E DLILS+++QLGQFI+++RLE ATPVP G+RPV GRHA VG PE L+
Sbjct: 61 STYVSLSERDTDLILSNRLQLGQFIYLERLEFATPVPRAAGIRPVAGRHAFVGKPEPLI 119
>AT1G23790.1 | chr1:8410099-8411917 FORWARD LENGTH=519
Length = 518
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 92/122 (75%), Gaps = 1/122 (0%)
Query: 1 MASLVPGVLVKLLQHMNTDVKVAGEHRSSLLQVVSIVPA-LAGSDLFTNQGFYLKVSDSS 59
MA+L PG+L KL+ M T VK GEHRSSLLQV IVP L +L QGF++KVSDSS
Sbjct: 1 MAALAPGILQKLIDGMKTGVKPTGEHRSSLLQVTDIVPIDLDEKNLLPKQGFFIKVSDSS 60
Query: 60 HATYVSLPEDQHDLILSDKIQLGQFIHVDRLEAATPVPILRGVRPVPGRHACVGNPEDLV 119
H+ YVSLP DQ D +LS+K+QLGQFI+VDRL+ TPVPI++G RP+PGRH +G PE L+
Sbjct: 61 HSIYVSLPSDQDDDVLSNKMQLGQFIYVDRLDPGTPVPIIKGARPIPGRHPLLGTPEPLM 120
Query: 120 VT 121
T
Sbjct: 121 ST 122
>AT1G70340.1 | chr1:26504567-26506389 REVERSE LENGTH=511
Length = 510
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 1 MASLVPGVLVKLLQHMNTDVKVAGEHRSSLLQVVSIVPA-LAGSDLFTNQGFYLKVSDSS 59
MA+L PG+L KL+Q M T +K EHRSS+LQV IVP L L QGF +K+SDSS
Sbjct: 1 MAALAPGILQKLIQGMKTGIKPTREHRSSMLQVTDIVPIDLDEKSLEPKQGFLIKISDSS 60
Query: 60 HATYVSLPEDQHDLILSDKIQLGQFIHVDRLEAATPVPILRGVRPVPGRHACVGNPEDLV 119
H+ YVSLP DQ D++LS+K+QLGQFI+VDRLE +PVP+++G +P+PGRH +G PE LV
Sbjct: 61 HSIYVSLPSDQDDVVLSNKLQLGQFIYVDRLEPGSPVPVIKGAKPIPGRHPLLGTPETLV 120
Query: 120 V 120
V
Sbjct: 121 V 121
>AT3G19610.1 | chr3:6812493-6814660 REVERSE LENGTH=641
Length = 640
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
Query: 1 MASLVPGVLVKLLQHMNT-DVKVAGEHRSSLLQVVSIVPALAGSDLFTNQGFYLKVSDSS 59
MA L GVL KLL+ M V+ +HR LLQ+ I+P LA L+ N+GF+L+++DS+
Sbjct: 29 MAELRSGVLFKLLEEMGVGKVRRDVDHRPVLLQIRCIIPVLAAGGLWPNKGFFLRITDST 88
Query: 60 HATYVSLPEDQHDLILSDKIQLGQFIHVDRLEAATPVPILRGVRPVPGRHACVGNPEDLV 119
H+ YVSLP +++DL+L DK+Q+GQ I V++LE A PVP+++G+RP PGR AC G+P DL+
Sbjct: 89 HSIYVSLPREENDLVLYDKLQIGQLIFVEKLEFAYPVPMIKGIRPTPGRRACTGDPIDLI 148
>AT2G31920.1 | chr2:13574053-13576367 REVERSE LENGTH=586
Length = 585
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 82/126 (65%), Gaps = 9/126 (7%)
Query: 1 MASLVPGVLVKLLQ----HMNTDVKVAGEHRSSLLQVVSIVPALAGSDLFTNQGFYLKVS 56
MASL PGVL LL + + + HRS LLQV+ IVP L+ D + ++ F++KVS
Sbjct: 1 MASLTPGVLSNLLNIAAGNSPSSPPLLSSHRSPLLQVIEIVPCLS-DDQWRSEAFFVKVS 59
Query: 57 DSSHATYVSLPE-DQHDLILSDKIQLGQFIHVD---RLEAATPVPILRGVRPVPGRHACV 112
DS HA YV++ D DLI SD+IQLGQFI++ +E PVP++RG++PVP R CV
Sbjct: 60 DSLHAAYVAVSTGDDADLIRSDEIQLGQFIYICGGLHVEKGCPVPVIRGLKPVPKRRMCV 119
Query: 113 GNPEDL 118
GNP DL
Sbjct: 120 GNPSDL 125
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.309 0.126 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,171,758
Number of extensions: 381480
Number of successful extensions: 1170
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1162
Number of HSP's successfully gapped: 7
Length of query: 463
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 361
Effective length of database: 8,310,137
Effective search space: 2999959457
Effective search space used: 2999959457
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 113 (48.1 bits)