BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0513100 Os09g0513100|AK120151
         (308 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G03310.1  | chr3:778767-781488 REVERSE LENGTH=448              389   e-108
AT4G19860.1  | chr4:10777655-10780260 REVERSE LENGTH=536          324   4e-89

>AT3G03310.1 | chr3:778767-781488 REVERSE LENGTH=448
          Length = 447

 Score =  389 bits (998), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/286 (64%), Positives = 218/286 (76%), Gaps = 2/286 (0%)

Query: 21  ETAYKASGGKKVNIISHSMGGLLVSCFMSMNRDIFAKYVNKWICIACPFQGAPGCINDSL 80
           ETAYK SGG+KV IISHSMGGL+VSCFM ++ + F+KYVNKWI IA PFQGAPGCINDS+
Sbjct: 160 ETAYKRSGGRKVTIISHSMGGLMVSCFMYLHPEAFSKYVNKWITIATPFQGAPGCINDSI 219

Query: 81  LTGLQFVYGFESFFFVSRWVMHQLLVECPSIYEMLPNPHFKWKKAPVVQVWRKKPEK--D 138
           LTG+QFV G ESFFFVSRW MHQLLVECPSIYEM+ NP FKWKK P ++VWRKK E   D
Sbjct: 220 LTGVQFVEGLESFFFVSRWTMHQLLVECPSIYEMMANPDFKWKKQPEIRVWRKKSENDVD 279

Query: 139 GIAELVLYEATDCLSLFQEALRNNELKYNGKTIALPFNMSVFKWATETRRILEDAELPDT 198
              EL  +   + + LF +AL+NNEL Y G  IALPFN ++  WA +TR IL  A+LPD 
Sbjct: 280 TSVELESFGLIESIDLFNDALKNNELSYGGNKIALPFNFAILDWAAKTREILNKAQLPDG 339

Query: 199 VSFYNIYGTSYDTPYDVCYGSESSPIGDLSEVCHTMPVYTYVDGDGTVPIESTMADGFAA 258
           VSFYNIYG S +TP+DVCYG+E+SPI DLSE+C TMP YTYVDGDGTVP ES  A  F A
Sbjct: 340 VSFYNIYGVSLNTPFDVCYGTETSPIDDLSEICQTMPEYTYVDGDGTVPAESAAAAQFKA 399

Query: 259 KERVGIEADHRGLLCDENVFELLKKWLGVKEESTRRRRLSKSKVTD 304
              VG+   HRGLL DE VFEL+++WLGV+ +  +R+ L   KV D
Sbjct: 400 VASVGVSGSHRGLLRDERVFELIQQWLGVEPKKAKRKHLRTHKVVD 445



>AT4G19860.1 | chr4:10777655-10780260 REVERSE LENGTH=536
          Length = 535

 Score =  324 bits (830), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 150/275 (54%), Positives = 196/275 (71%), Gaps = 4/275 (1%)

Query: 19  KLETAYKASGGKKVNIISHSMGGLLVSCFMSMNRDIFAKYVNKWICIACPFQGAPGCIND 78
           KLET YKASG KK+N+ISHSMGGLLV CFM ++ DIF KYV  WI IA PF+GAPG I  
Sbjct: 163 KLETVYKASGEKKINVISHSMGGLLVKCFMGLHSDIFEKYVQNWIAIAAPFRGAPGYITS 222

Query: 79  SLLTGLQFVYGFESFFFVSRWVMHQLLVECPSIYEMLPNPHFKWKKAPVVQVWRKKPEKD 138
           +LL G+ FV G+E  FFVS+W MHQLL+ECPSIYE++  P+FKW+  PV+++WR+K   D
Sbjct: 223 TLLNGMSFVNGWEQNFFVSKWSMHQLLIECPSIYELMCCPYFKWELPPVLELWREKESND 282

Query: 139 GIAE----LVLYEATDCLSLFQEALRNNELKYNGKTIALPFNMSVFKWATETRRILEDAE 194
           G+      L  Y + + L +F ++L NN   Y G++I LPFN  + +WA +T+++L  A+
Sbjct: 283 GVGTSYVVLESYCSLESLEVFTKSLSNNTADYCGESIDLPFNWKIMEWAHKTKQVLASAK 342

Query: 195 LPDTVSFYNIYGTSYDTPYDVCYGSESSPIGDLSEVCHTMPVYTYVDGDGTVPIESTMAD 254
           LP  V FYNIYGT+ +TP+ VCYG+E  P+ DL+ + +  P Y  VDGDGTVP+ES MAD
Sbjct: 343 LPPKVKFYNIYGTNLETPHSVCYGNEKMPVKDLTNLRYFQPTYICVDGDGTVPMESAMAD 402

Query: 255 GFAAKERVGIEADHRGLLCDENVFELLKKWLGVKE 289
           G  A  RVG+  +HRG+L D  VF +LKKWL V E
Sbjct: 403 GLEAVARVGVPGEHRGILNDHRVFRMLKKWLNVGE 437



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.137    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,223,691
Number of extensions: 322466
Number of successful extensions: 645
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 645
Number of HSP's successfully gapped: 2
Length of query: 308
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 210
Effective length of database: 8,419,801
Effective search space: 1768158210
Effective search space used: 1768158210
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)