BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0512700 Os09g0512700|AK059516
(410 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51980.1 | chr3:19285811-19287502 REVERSE LENGTH=383 331 4e-91
AT3G53800.1 | chr3:19930942-19932719 FORWARD LENGTH=364 85 6e-17
AT5G02150.1 | chr5:424481-426068 REVERSE LENGTH=325 85 7e-17
AT3G09350.1 | chr3:2871216-2873109 FORWARD LENGTH=364 84 1e-16
>AT3G51980.1 | chr3:19285811-19287502 REVERSE LENGTH=383
Length = 382
Score = 331 bits (848), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/324 (54%), Positives = 232/324 (71%), Gaps = 3/324 (0%)
Query: 82 DEFAGGFGSLDSMLQWAIGNSDPDKLKEQAEGVQKLSADELLKRRMEIKELMEKLKMPSD 141
D+ GGF SLD ML WAIG+SDP LKE A+ +K+S DEL KR++E+KEL+EKLKMPS+
Sbjct: 56 DQIDGGFSSLDGMLHWAIGHSDPATLKEAAKDAEKMSLDELQKRQLELKELVEKLKMPSN 115
Query: 142 ADLMKIAIADLNNSSISLEDRQRALQELLILVEPIDNANDLDKLGGLVAVIQDLNNANEE 201
A LM+IAI DLNNSS+SLEDR RALQELLILVEPIDNANDL K GGL V +LN+ + E
Sbjct: 116 AKLMQIAIDDLNNSSLSLEDRHRALQELLILVEPIDNANDLSKSGGLRVVAGELNHDDTE 175
Query: 202 IRTTSAWVLGKASQNNALVQNQILGYGALARLVKMGYATSAEEATKALYAISALVRDNIN 261
+R +AWVLGKASQNN VQ Q+L GAL L+KM ++S EEA KAL+A+SAL+R+NI
Sbjct: 176 VRKLAAWVLGKASQNNPFVQEQVLELGALTTLIKMVNSSSTEEAVKALFAVSALIRNNIA 235
Query: 262 GQEAFHSENGSAMLQHILASNSVDVRLQKKAVFLVTDLADFQL-NSGNSGLPFLSDRIFL 320
GQ+ F + +G ML+ ++ + S+D++L++KAVFLV DLA+ QL N+ LP DR+FL
Sbjct: 236 GQDLFFAAHGYIMLRDVMNNGSLDMKLRRKAVFLVGDLAESQLQNTEKDELPIFKDRLFL 295
Query: 321 KSLVDMLSRFDLDLQEXXXXXXXXXXXXXXTEATDF-ESCDLSSVLYRLGVQLEE-LPSE 378
KS+VD++ DLDLQE E ESC L L R+ +QLEE + E
Sbjct: 296 KSVVDLIVVLDLDLQEKALTAIQTLLQLKSIEPQVLKESCGLEEALERMKLQLEESMADE 355
Query: 379 EQKEYAGEVDDLRREVQILFQDKL 402
+++YA +V+ +R EV+++F+ KL
Sbjct: 356 YKRDYAADVESIRGEVELIFRQKL 379
>AT3G53800.1 | chr3:19930942-19932719 FORWARD LENGTH=364
Length = 363
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 7/201 (3%)
Query: 137 KMPSDADLMKIAIADLNNSSISLEDRQRALQELLILVEPIDNANDLDKLGGLVAVIQDLN 196
+M + +MK+ L ++ +D + L EL VE ID ANDL +GGLV ++ L
Sbjct: 50 RMKVISQIMKMPEQVLEAQGVTPDDLEGMLAELQEHVESIDLANDLHSIGGLVPLLSYLK 109
Query: 197 NANEEIRTTSAWVLGKASQNNALVQNQILGYGALARLVKMGYA-TSAEEATKALYAISAL 255
N+N +IR SA VL QNN Q ++ L+ A TKAL AIS+L
Sbjct: 110 NSNAKIRAKSADVLTTVVQNNPRSQQLVMEANGFEPLLTNFIADPDIRVRTKALGAISSL 169
Query: 256 VRDNINGQEAFHSENGSAMLQHILASNSVDVRLQKKAVFLVTDLADFQLNSGNSGLPFLS 315
+R+N G AF NG A L+ L S++ VR Q+KA+ +L + L NS +
Sbjct: 170 IRNNQPGITAFRLANGYAGLRDALVSDT--VRFQRKAL----NLLHYLLQESNSDCKIVR 223
Query: 316 DRIFLKSLVDMLSRFDLDLQE 336
D F + ++ + S D +++E
Sbjct: 224 DLGFPRIMIHLASNQDFEVRE 244
>AT5G02150.1 | chr5:424481-426068 REVERSE LENGTH=325
Length = 324
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 127/255 (49%), Gaps = 29/255 (11%)
Query: 92 DSMLQWAIGNSDPDKLKEQ---------AEGVQKLSADELLKRRMEIKELMEKLKMPSDA 142
D +L+W++ +SD + Q AE +Q + D ++KR +KE+ + L+ P
Sbjct: 9 DGLLKWSLSHSDGTRPTCQLSEEDRKWFAEAMQSQTVD-VVKR---LKEITQVLQTPQQV 64
Query: 143 DLMKIAIADLNNSSISLEDRQRALQELLILVEPIDNANDLDKLGGLVAVIQDLNNANEEI 202
L ++ +D + L EL VE ID ANDL +GGLV ++ L N+N I
Sbjct: 65 ---------LEAHEVTPQDIEGLLDELQEHVESIDMANDLHSVGGLVPLLGYLKNSNANI 115
Query: 203 RTTSAWVLGKASQNNALVQNQILGYGAL-ARLVKMGYATSAEEATKALYAISALVRDNIN 261
R SA V+ +NN Q ++ L + L++ T T+AL AIS+L+R+N
Sbjct: 116 RAKSADVVSTIVENNPRSQESVMEANGLESLLLRFTSDTDMHSRTQALGAISSLIRNNKP 175
Query: 262 GQEAFHSENGSAMLQHILASNSVDVRLQKKAVFLVTDLADFQLNSGNSGLPFLSDRIFLK 321
G F NG + L+ L ++S VR Q+KA+ L+ L Q N +S + L
Sbjct: 176 GITGFRIANGYSGLKDALETDS--VRFQRKALNLLHYL--LQENDSDSDIAIEFGLHHL- 230
Query: 322 SLVDMLSRFDLDLQE 336
++ ++S FD D++E
Sbjct: 231 -MMHLVSSFDADVRE 244
>AT3G09350.1 | chr3:2871216-2873109 FORWARD LENGTH=364
Length = 363
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 9/207 (4%)
Query: 92 DSMLQWAIGNSDPDKLKEQ-AEGVQKLSADELLKRRMEIKELMEKLKMPSDADLMKIAIA 150
D +L+W++ ++D + Q +E +K + + + +++ + M+++ + +M+
Sbjct: 9 DGLLKWSLSHADGTRPTRQLSEEDRKWFMEAMQSQTVDVVKRMKEITL-----VMQTPEQ 63
Query: 151 DLNNSSISLEDRQRALQELLILVEPIDNANDLDKLGGLVAVIQDLNNANEEIRTTSAWVL 210
L ++ ED Q L EL VE ID ANDL +GGLV ++ L N++ IR +A V+
Sbjct: 64 VLVEHGVTPEDIQDLLDELQEHVESIDMANDLHSIGGLVPLLSFLKNSHANIRAKAADVV 123
Query: 211 GKASQNNALVQNQILGYGALARLVK-MGYATSAEEATKALYAISALVRDNINGQEAFHSE 269
QNN Q ++ AL L+ T T+AL AIS+L+R N G AF
Sbjct: 124 STIVQNNPRSQELVMETNALESLLSNFTSDTDIHARTQALGAISSLIRHNKPGVTAFKLA 183
Query: 270 NGSAMLQHILASNSVDVRLQKKAVFLV 296
NG A L+ LAS+S VR Q+KA+ L+
Sbjct: 184 NGYAGLRDALASDS--VRFQRKALNLL 208
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.130 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,901,186
Number of extensions: 247491
Number of successful extensions: 749
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 742
Number of HSP's successfully gapped: 4
Length of query: 410
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 309
Effective length of database: 8,337,553
Effective search space: 2576303877
Effective search space used: 2576303877
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)