BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0509400 Os09g0509400|AK100887
         (718 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26890.1  | chr3:9907456-9910463 REVERSE LENGTH=650            343   3e-94
AT5G41110.1  | chr5:16452598-16454989 FORWARD LENGTH=622          318   7e-87

>AT3G26890.1 | chr3:9907456-9910463 REVERSE LENGTH=650
          Length = 649

 Score =  343 bits (879), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 276/753 (36%), Positives = 367/753 (48%), Gaps = 141/753 (18%)

Query: 1   MGLPQVPAIKE--EVLPTMSASLIVR-PHFAGNSTCHLGKLPAESSSNRASPCSYISDFK 57
           MGLPQ  + ++  E L T S SL    P +A   T H   +   +S +    CS I++F 
Sbjct: 1   MGLPQTASSEQSQEALSTPSCSLSQSLPVYA---TSHDSDVL--NSGSEEGICSSIAEFD 55

Query: 58  RNDVLDSLNGFDGNFR-------ASHAAYGPAGFQGLKPDTGDVGSRSGPKLGSNVQMPA 110
           R   L+ L   D + R        S +A+G   +   K  +   G+R             
Sbjct: 56  RKTSLEPLEFTDDSCRFRGTCVVTSSSAHGSTSYAAGKVSSSLTGAR------------- 102

Query: 111 MRIVGFESGFANSTGGPDTMVADNTDSPLVIDNCHSL--------IEQHGPHARKRVLSP 162
            RIVGF SG        +T   DN  + + +D  HSL        ++  G   RKRVLSP
Sbjct: 103 -RIVGFASG--------ETSSLDNKQTSVAVD--HSLSSTVGVAGVDIGGALVRKRVLSP 151

Query: 163 LNNALPGHFRGDALNIGSGD-AKIQHSDCARRLYTSGFQDRKKANT-AILDSFEAPTWPA 220
           LN   P  FRGD  +I  G+  +I +S  +     S  QD  KANT + L     PT   
Sbjct: 152 LNTLFPVKFRGDLHDISCGNHQQITYSGQSNGFCNSVAQDHIKANTPSRLHLSTTPT--T 209

Query: 221 SRYSNWSTEQGVDKFSGSTFTDGPLLESR---------ESFPCSDHLEALESVAVPL--- 268
           +    W       + S   FTDGPLL+S          E    S   E   +   PL   
Sbjct: 210 TSCWEWKNVSNSGRLSSMVFTDGPLLDSVDLRQPVKGGEVCLYSPLYETSSTPNKPLPCD 269

Query: 269 AKLAHPPLLNLSPLGPTWMHGTNTVGS--HGESLRETEGSTCEGYSEGHGRSRIRDAFEK 326
            +++  P L LSPLGP +      V S   G+ L +         SE       R  F+ 
Sbjct: 270 KEISVSPPLCLSPLGPKFSERVKAVRSCQTGKILED-----LRNISEEAELRVDRRLFDD 324

Query: 327 TNILHDDFDMRIPKKSSDRKSQNWGPESASVSPRIGCIRSIGLLPVRRSLIGSFEESLLS 386
              +   F M       +R +     ESA  SP    IRS+   P++RSL+GSFEESLL+
Sbjct: 325 AYAIRRAFSM-------ERST-----ESAPASPCKRFIRSLSGRPIQRSLVGSFEESLLT 372

Query: 387 GRYSCGKDNQNIDGFLAVLNVTGGNFSPPTQKLPFSATSIDENSSLLYYSSIDLVGXXXX 446
           GR SCG  NQ IDGFLAVL++ GGN SP +QKLPFS TS  ++  LLYY+SIDL G    
Sbjct: 373 GRLSCGPTNQKIDGFLAVLSIAGGNISPKSQKLPFSVTSAGDDCLLLYYASIDLAGGSKL 432

Query: 447 XXXXXXXXXXXXXNHDSRSAKSRLRIPVKGRVQLVVSNPEKTPLHTFFCNYDLSDMPAGT 506
                        N D++S+KS+LRIP+KGR+QLV+SNPEKTPLHTF CNYDL+DMPAGT
Sbjct: 433 NKFWGQKVKTSQMNSDAQSSKSQLRIPMKGRIQLVLSNPEKTPLHTFLCNYDLTDMPAGT 492

Query: 507 KTFMRQKVTLFPVSPSNQKKEGSKANETKVESVQFGSELRECGTLFSECCRPG--QNCNL 564
           KTF+RQKVTL     SN   E ++ N             R+  +L  E  + G  ++C  
Sbjct: 493 KTFLRQKVTL---GSSNPTSEATQENT------------RKATSLEKENSKHGDKESCEG 537

Query: 565 IDDSEKGGRKNMTCCSMECDIRESNDXXXXXXXXXXXXXXVCCCQSDTFPLGEKKYCCRS 624
            D  +          S+E D+   +                             K C + 
Sbjct: 538 SDSVD----------SVEGDVLHESG----------------------------KICLKP 559

Query: 625 SKINDPAGGALRYALHLRFLSPFAKKPSRSMQRSKSDVSSEPYNHSSGPEEHRRFYLYND 684
           SK  +   GALRYALHLRFL P  KK S+  + ++S  + +  N  S  +  RRFYLYND
Sbjct: 560 SKECNGGSGALRYALHLRFLCPLPKKSSKKSEETES--TGQKKNLDS--DGKRRFYLYND 615

Query: 685 VRVVFPQRHSDADEGELRVEHDFPADPKYFDIS 717
           +RVVFPQRH+D+DEG+L VE+ +P +P+YFDI+
Sbjct: 616 LRVVFPQRHTDSDEGKLNVEYHYPENPRYFDIT 648



>AT5G41110.1 | chr5:16452598-16454989 FORWARD LENGTH=622
          Length = 621

 Score =  318 bits (815), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 230/617 (37%), Positives = 304/617 (49%), Gaps = 109/617 (17%)

Query: 112 RIVGFESGFANSTGGPDTMVADNTDSPLVIDNCHSLIEQHGPHARKRVLSPLNNALPGHF 171
           RIVGFES   +S     T +  N        N   +I   G   RKRV SPLN   P  F
Sbjct: 102 RIVGFESNEVSSVSNEYTSITVNRTGG---SNEVDII--GGSLVRKRVSSPLNKLFPEKF 156

Query: 172 RGDALNIGSGDAKIQHSDCARRLYTSGFQDRKKANTAILDSFEAPTWPASRYSNWSTEQG 231
           RGD+L+I   +  +  +   +  +    QD KKAN     S     +  S  S W  +  
Sbjct: 157 RGDSLDISHSNQPMTSAGLPKGFHIPVGQDHKKANI----SGRLRLFTTSNCSEWGNDTS 212

Query: 232 -VDKFSGSTFTDGPLLESRESFPCSD----HLEALESVAVPLAKL------AHPPLLNLS 280
              K S + FTDGPLL+S +  P  D    +    E+  VP   L      +  P L+LS
Sbjct: 213 HTGKLSSTVFTDGPLLDSNDLQPSQDVHCLYSPVHETFQVPNKPLPCHRNISVSPPLSLS 272

Query: 281 PLGPTWMHGTNTV-GSHGESLRETEGSTCEGYSEGHGRSRIRDAFEKTNILHDDFDMRIP 339
           PLGP +      + G    ++ E +        E   R+  R +F+ TN +   F M   
Sbjct: 273 PLGPRFSERMKALQGGLNGNIFEDDVCLKNTGEEAELRTGHR-SFDDTNGIQRAFSM--- 328

Query: 340 KKSSDRKSQNWGPESASVSPRIGCIRSIGLLPVRRSLIGSFEESLLSGRYSCGKDNQNID 399
               DR       ES   SP     RS+   P++RSL+GSFEESL SGR S G+ NQ ID
Sbjct: 329 ----DR-----AIESVPTSPCKRFSRSLSGRPIQRSLVGSFEESLFSGRLSYGQANQKID 379

Query: 400 GFLAVLNVTGGNFSPPTQKLPFSATSIDENSSLLYYSSIDLVGXXXXXXXXXXXXXXXXX 459
           GFLA+L++ GGN SP +QKLPFS TS+ ++  LLYY+SIDL G                 
Sbjct: 380 GFLAILSIAGGNISPKSQKLPFSVTSVGDDCFLLYYASIDLSGGSLPSKLWGQKLKTNQN 439

Query: 460 NHDSRSAKSRLRIPVKGRVQLVVSNPEKTPLHTFFCNYDLSDMPAGTKTFMRQKVTLFPV 519
             D+++   RLRIP+KGR+QLV+SNPEKTPLHTF CNYDL+DMP GTKTF+RQKVTL   
Sbjct: 440 KSDAQTINKRLRIPMKGRIQLVLSNPEKTPLHTFLCNYDLTDMPHGTKTFLRQKVTLASS 499

Query: 520 SPSNQKKEGSKANETKVESVQFGSELRECGTLFSECCRPGQNCNLIDDSEKGGRKNMTCC 579
            P+  KK  +K +E        GSEL +     +EC                G KN    
Sbjct: 500 VPTKAKKSANKGSE--------GSELVDELHSPNEC----------------GNKN---- 531

Query: 580 SMECDIRESNDXXXXXXXXXXXXXXVCCCQSDTFPLGEKKYCCRSSKINDPAGGALRYAL 639
                                       C+      G++  C +S        G LRYAL
Sbjct: 532 ----------------------------CRETYRETGQR--CSKS--------GVLRYAL 553

Query: 640 HLRFLSPFAKKPSRSMQRSKSDVSSEPYNHSSGPEEHRRFYLYNDVRVVFPQRHSDADEG 699
           HL+F+ P  KK S+  Q+   D         +G +  RRFYLYN++RVVFPQRH+D+DEG
Sbjct: 554 HLKFICPLRKKASKLGQKKSLD---------AGDDGERRFYLYNELRVVFPQRHTDSDEG 604

Query: 700 ELRVEHDFPADPKYFDI 716
           +L VE+ +P +P+YFD+
Sbjct: 605 KLNVEYHYPENPRYFDV 621



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.133    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,460,352
Number of extensions: 724797
Number of successful extensions: 1630
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1620
Number of HSP's successfully gapped: 4
Length of query: 718
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 612
Effective length of database: 8,200,473
Effective search space: 5018689476
Effective search space used: 5018689476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 115 (48.9 bits)