BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0509300 Os09g0509300|AK067488
(627 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33490.1 | chr2:14183552-14187666 FORWARD LENGTH=624 342 3e-94
AT3G26910.2 | chr3:9915304-9918511 REVERSE LENGTH=615 291 5e-79
AT5G41100.1 | chr5:16447429-16450610 FORWARD LENGTH=587 277 2e-74
>AT2G33490.1 | chr2:14183552-14187666 FORWARD LENGTH=624
Length = 623
Score = 342 bits (877), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 250/621 (40%), Positives = 338/621 (54%), Gaps = 77/621 (12%)
Query: 1 MKSSLRKLRGFALQRHEQRVDRRGGHSPXXXXXXXXXXXXSQDMADMRSCYDNLLSVAAA 60
MK+SLR+LRG L +HE + DRR + SQD+ DMR CYD+LL+ AAA
Sbjct: 1 MKTSLRRLRG-VLHKHESK-DRRDLRA---LVQKDELAQASQDVEDMRDCYDSLLNAAAA 55
Query: 61 IANSAYEFSEALQEMGTCLLKRVTPNKDGINDKVLLLLGKAQFELRKLVDSYRVHVLNTI 120
ANSAYEFSE+L+E+G CLL++ N D + +VL++LGK QFEL+KLVD YR H+ TI
Sbjct: 56 TANSAYEFSESLRELGACLLEKTALNDDEESGRVLIMLGKLQFELQKLVDKYRSHIFQTI 115
Query: 121 TTPSQSLLNELQTVEEMKHQCDEKRELFEFLLNAQKEKGRSKNAKSDIGASEQLKQAQDD 180
T PS+SLLNEL+ VEEM+ CDEKR ++E +L Q+EKGRSK K + + +QL++A DD
Sbjct: 116 TIPSESLLNELRIVEEMQRLCDEKRNVYEGMLTRQREKGRSKGGKGETFSPQQLQEAHDD 175
Query: 181 YQEEATLFLFRLKSLKQGQFRSLFTQAARHHAAQLNLFRKGLKSLEAVEPHVRLAAEQQH 240
Y+ E TLF+FRLKSLKQGQ RSL TQAARHHAAQL F+K L SLE V+PHV++ E QH
Sbjct: 176 YENETTLFVFRLKSLKQGQTRSLLTQAARHHAAQLCFFKKALSSLEEVDPHVQMVTESQH 235
Query: 241 IDHQFSAL-DEEDYSVDEENEDDYNDSHED--LSFDYGENKEGTEAGHASRSPTEELLDR 297
ID+ FS L D++ E NE+D ++ H+D LSF+Y N + +A ++ +E L
Sbjct: 236 IDYHFSGLEDDDGDDEIENNENDGSEVHDDGELSFEYRVNDKDQDADSSAGGSSE--LGN 293
Query: 298 SKAEYSSFPGERQ-------------------RSGSQSAPLFPEKKLE-AAERIKELRRS 337
S + G R+ SQSAPLFPE + +E++ +R +
Sbjct: 294 SDITFPQIGGPYTAQENEEGNYRKSHSFRRDVRAVSQSAPLFPENRTTPPSEKLLRMRST 353
Query: 338 ATRKLYTYVLPTPNDVRDTSQTV---------TANPTSGSPLGNKGAFYSSPLQPSTNVG 388
TRK TY LPTP + + + ++NPT K +YSSPL+
Sbjct: 354 LTRKFNTYALPTPVETTRSPSSTTSPGHKNVGSSNPTKAI---TKQIWYSSPLETRGPA- 409
Query: 389 DLRDNKLPSPTRLSNAHSVLKESNTNTTDTRTMLVLPLGDLSLPGYHDSKASDNKKVKRG 448
K+ S + ++ VL+ESN NT + L PL D G S+ +KR
Sbjct: 410 -----KVSSRSMVALKEQVLRESNKNT----SRLPPPLAD----GLLFSRLG---TLKRR 453
Query: 449 SFSGPIVPR---SRSTENIDXXXXXXXXXXXXXXXXXVRVXXXXXXXXXXXXKIKELHEL 505
SFSGP+ + ++ V KI ELHEL
Sbjct: 454 SFSGPLTSKPLPNKPLSTTSHLYSGPIPRNPVSKLPKVSSSPTASPTFVSTPKISELHEL 513
Query: 506 PRPPANASKHTTFPSLVAHSAPLVPNSAPLAPRGQDHFRPRQTPPSAPQTASPLPTPPGP 565
PRPP +S ++ + +SAPLV S L+ P +ASPLP PP
Sbjct: 514 PRPPPRSSTKSS--RELGYSAPLVSRSQLLS------------KPLITNSASPLPIPPA- 558
Query: 566 ISRSFSIPSRGMRTSGISDGK 586
I+RSFSIP+ +R S + K
Sbjct: 559 ITRSFSIPTSNLRASDLDMSK 579
>AT3G26910.2 | chr3:9915304-9918511 REVERSE LENGTH=615
Length = 614
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 232/613 (37%), Positives = 314/613 (51%), Gaps = 81/613 (13%)
Query: 1 MKSSLRKLRGFALQRHEQRVDRRGGHSPXXXXXXXXXXXXSQDMADMRSCYDNLLSVAAA 60
MK+S+ KLR L H +VD + +DM DMR CYD LL+ AAA
Sbjct: 1 MKASIEKLR--RLTSHSHKVDVKEKGDVMATTQIDELDRAGKDMQDMRECYDRLLAAAAA 58
Query: 61 IANSAYEFSEALQEMGTCLLKRVTPNKDGINDKVLLLLGKAQFELRKLVDSYRVHVLNTI 120
ANSAYEFSE+L EMG+CL +++ P+ D + ++L +LGK Q EL++L+D+YR H+ TI
Sbjct: 59 TANSAYEFSESLGEMGSCL-EQIAPHNDEESSRILFMLGKVQSELQRLLDTYRSHIFETI 117
Query: 121 TTPSQSLLNELQTVEEMKHQCDEKRELFEFLLNAQKEKGRSKNAKSDIGASEQLKQAQDD 180
T+PS++LL +L+ VE+MK QCD KR ++E L KEKGR K++K + + + A +
Sbjct: 118 TSPSEALLKDLRYVEDMKQQCDGKRNVYEMSL--VKEKGRPKSSKGERHIPPESRPAYSE 175
Query: 181 YQEEATLFLFRLKSLKQGQFRSLFTQAARHHAAQLNLFRKGLKSLEAVEPHVRLAAEQQH 240
+ +EAT+ +FRLKSLK+GQ RSL QA RHH AQ+ LF GLKSLEAVE HV++A E+QH
Sbjct: 176 FHDEATMCIFRLKSLKEGQARSLLIQAVRHHTAQMRLFHTGLKSLEAVERHVKVAVEKQH 235
Query: 241 IDHQFSAL-DEEDYSVDEENEDDYNDSHEDLSFDYGENKEGTEAGHASRSPTEELLDRS- 298
ID S +E + S D++++ Y + +LSFDY N++ EA S +P +D +
Sbjct: 236 IDCDLSVHGNEMEASEDDDDDGRYMNREGELSFDYRTNEQKVEASSLS-TPWATKMDDTD 294
Query: 299 ------------------KAEYSSFPGERQRSGSQSAPLFPEKKLEAAERIKELRRSATR 340
+ EY ++ S S SAPLFPEKK + +ER+ R A
Sbjct: 295 LSFPRPSTTRPAAVNADHREEYPVSTRDKYLS-SHSAPLFPEKKPDVSERL----RQANP 349
Query: 341 KLYTYVLPTPNDVR---DTSQTVTANPTSGSPLGNKGAFYSSPLQPSTNVGDLRDNKLPS 397
YVLPTPND R SQ + PT+ S GN ++SSPL+P + D +D
Sbjct: 350 SFNAYVLPTPNDSRYSKPVSQALNPRPTNHS-AGN--IWHSSPLEPIKSGKDGKD----- 401
Query: 398 PTRLSNAHSVLKESNTNTTDTRTMLVLPLGDLSLPGYHDSKASDNKKVKRGSFSGPIVPR 457
ESN+ G L P D+ + R +FSGP+ P
Sbjct: 402 -----------AESNSF-----------YGRLPRPSTTDTHHHQQQAAGRHAFSGPLRP- 438
Query: 458 SRSTENIDXXXXXXXX----------XXXXXXXXXVRVXXXXXXXXXXXXKIKELHELPR 507
ST+ I RV ++ ELHELPR
Sbjct: 439 -SSTKPITMADSYSGAFCPLPTPPVLQSHPHSSSSPRVSPTASPPPASSPRLNELHELPR 497
Query: 508 PPANASKHTTFPSLVAHSAPLVPNSAPLAPRGQDHFRPRQTPPSAPQ-TASPLPTPPGPI 566
PP H P A S LV +SAPL Q+ PSA ASPLP PP +
Sbjct: 498 PPG----HFAPPPRRAKSPGLVGHSAPLTAWNQERSTVTVAVPSATNIVASPLPVPPLVV 553
Query: 567 SRSFSIPSRGMRT 579
RS+SIPSR R
Sbjct: 554 PRSYSIPSRNQRV 566
>AT5G41100.1 | chr5:16447429-16450610 FORWARD LENGTH=587
Length = 586
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 208/551 (37%), Positives = 293/551 (53%), Gaps = 89/551 (16%)
Query: 1 MKSSLRKLRGFALQRHEQRVDRRGGHSPXXXXXXXXXXXXSQDMADMRSCYDNLLSVAAA 60
MK+S +LR FAL + + +D G P ++DM DMR YD LL VAAA
Sbjct: 2 MKASFGRLRRFALPKADA-IDI-GELFPTAQIEGLARA--AKDMQDMREGYDRLLEVAAA 57
Query: 61 IANSAYEFSEALQEMGTCLLKRVTPNKDGINDKVLLLLGKAQFELRKLVDSYRVHVLNTI 120
+ANSAYEFSE+L EMG+CL +++ P+ D + +LL+LGK QFEL+KLVD+YR + TI
Sbjct: 58 MANSAYEFSESLGEMGSCL-EQIAPHNDQESGGILLMLGKVQFELKKLVDTYRSQIFKTI 116
Query: 121 TTPSQSLLNELQTVEEMKHQCDEKRELFE-FLLNAQKEKGRSKNAKSDIGASEQLKQAQD 179
T PS+SLL++L+TVE+MK QC+EKR++ + L+ K+K + K K + QL+ A+D
Sbjct: 117 TRPSESLLSDLRTVEDMKQQCEEKRDVVKHMLMEHVKDKVQVKGTKGERLIRRQLETARD 176
Query: 180 DYQEEATLFLFRLKSLKQGQFRSLFTQAARHHAAQLNLFRKGLKSLEAVEPHVRLAAEQQ 239
+ Q+EATL +FRLKSLK+GQ RSL TQAARHH AQ+++F GLKSLEAVE HVR+AA++Q
Sbjct: 177 ELQDEATLCIFRLKSLKEGQARSLLTQAARHHTAQMHMFFAGLKSLEAVEQHVRIAADRQ 236
Query: 240 HIDHQFS-ALDEEDYSVDEENEDDYNDSHEDLSFDYGENKEGTEA-----GHASRSPTEE 293
HID S +E D S D +++D + +LSFDY +++ E G T+
Sbjct: 237 HIDCVLSDPGNEMDCSEDNDDDDRLVNRDGELSFDYITSEQRVEVISTPHGSMKMDDTDL 296
Query: 294 LLDR----SKAEYSSFPGER-------QRSGSQSAPLFPEKKLEAAER-IKELRRSATRK 341
R A ++ P E +R+ S SAPLFP+KK + A+R ++++ SA
Sbjct: 297 SFQRPSPAGSATVNADPREEHSVSNRDRRTSSHSAPLFPDKKADLADRSMRQMTPSAN-- 354
Query: 342 LYTYVLPTPNDVRDTSQTVTANPTSGSPLGNKGA--FYSSPLQPSTNVGDLRDNKLPSPT 399
Y+LPTP D + S + P + + N A ++SSPL+P
Sbjct: 355 --AYILPTPVDSK--SSPIFTKPVTQT---NHSANLWHSSPLEP---------------- 391
Query: 400 RLSNAHSVLKESNTNTTDTRTMLVLPLGDLSLPGYHDSKASDNKKVKRGSFSGPIVPRSR 459
+ AH K++ +N L P H +FSGP+ P S
Sbjct: 392 -IKTAH---KDAESNL----------YSRLPRPSEH-------------AFSGPLKPSS- 423
Query: 460 STENIDXXXXXXXXXXXXXXXXXVRVXXXXXXXXXXXXKIKELHELPRPPANAS--KHTT 517
R+ +I ELHELPRPP + + +
Sbjct: 424 --------TRLPVPVAVQAQSSSPRISPTASPPLASSPRINELHELPRPPGQFAPPRRSK 475
Query: 518 FPSLVAHSAPL 528
P LV HSAPL
Sbjct: 476 SPGLVGHSAPL 486
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.127 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,891,554
Number of extensions: 577545
Number of successful extensions: 3654
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 3643
Number of HSP's successfully gapped: 5
Length of query: 627
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 522
Effective length of database: 8,227,889
Effective search space: 4294958058
Effective search space used: 4294958058
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)