BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0509000 Os09g0509000|AK106007
(396 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G15000.1 | chr3:5050321-5052121 FORWARD LENGTH=396 242 2e-64
AT3G06790.1 | chr3:2144564-2145743 REVERSE LENGTH=245 167 1e-41
AT2G35240.1 | chr2:14845099-14846262 REVERSE LENGTH=233 133 1e-31
AT2G33430.1 | chr2:14162732-14164729 FORWARD LENGTH=220 131 5e-31
AT1G53260.1 | chr1:19859393-19860421 REVERSE LENGTH=272 130 2e-30
AT1G72530.2 | chr1:27312999-27313937 FORWARD LENGTH=193 129 3e-30
AT1G32580.1 | chr1:11784108-11785430 FORWARD LENGTH=230 129 3e-30
AT1G11430.1 | chr1:3847273-3848938 FORWARD LENGTH=233 127 7e-30
AT4G20020.1 | chr4:10844433-10846085 REVERSE LENGTH=420 97 2e-20
AT5G44780.1 | chr5:18068100-18070544 FORWARD LENGTH=724 84 2e-16
AT3G20930.1 | chr3:7331739-7333749 FORWARD LENGTH=375 49 5e-06
>AT3G15000.1 | chr3:5050321-5052121 FORWARD LENGTH=396
Length = 395
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 132/178 (74%), Gaps = 5/178 (2%)
Query: 54 FATQPATSSLRDSSPNWSNRPPKETILLDGCDFEHWLVVVEXXXXXXXXXXXTRDEIIDG 113
+TQ +SSL D +PNWSNRPPKETILLDGCDFEHWLVVVE TRDEIID
Sbjct: 65 LSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEP-----TRDEIIDS 119
Query: 114 YIKTLAQVVGSEEEARHKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVR 173
YIKTLAQ+VGSE+EAR KIYSVSTR Y+AFGALVSE+LS+KLKEL VRWVLPDSYLDVR
Sbjct: 120 YIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVR 179
Query: 174 NKDYGGEPFINGEAVPYDPKYHEEWVXXXXXXXXXXXXXXXXXXXXXXXXXERRRENM 231
NKDYGGEPFI+G+AVPYDPKYHEEW+ ERRRENM
Sbjct: 180 NKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENM 237
>AT3G06790.1 | chr3:2144564-2145743 REVERSE LENGTH=245
Length = 244
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 104/147 (70%), Gaps = 11/147 (7%)
Query: 54 FATQPATSS-----LRDSSPNWSNRPPKETILLDGCDFEHWLVVVEXXXXXXXXXXXTRD 108
+T+P TS L D SPNWSNRPPKETILLDGCD+EHWL+V+E T +
Sbjct: 57 ISTRPKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKP-----TEE 111
Query: 109 EIIDGYIKTLAQVVGSEEEARHKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDS 168
E+I+ Y+KTL V+G +EEA+ KIYSV T Y FGAL+SEELS K+K LP V WVLPDS
Sbjct: 112 EMINSYVKTLTSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDS 171
Query: 169 YLDVRNKDYGGEPFINGEAVPYDPKYH 195
YLDV NKDYGG+ ++ G+ +P P+Y
Sbjct: 172 YLDVPNKDYGGDLYVEGKVIP-RPQYR 197
>AT2G35240.1 | chr2:14845099-14846262 REVERSE LENGTH=233
Length = 232
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 66 SSPNWSNRPPKETI-LLDGCDFEHWLVVVEXXXXXXXXXXXTRDEIIDGYIKTLAQVVGS 124
S N+S+RPP E L GCD+EHWL+V+E + ++ID Y++TLA++VGS
Sbjct: 75 SGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQ----KQQMIDCYVQTLAKIVGS 130
Query: 125 EEEARHKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGEPFIN 184
EEEAR KIY+VS YF FG + EE S KL+ LP V +VLPDSY+D KDYG E F+N
Sbjct: 131 EEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGAELFVN 190
Query: 185 GEAVPYDPKYHEEWV 199
GE VP P+ V
Sbjct: 191 GEVVPRPPERQRRMV 205
>AT2G33430.1 | chr2:14162732-14164729 FORWARD LENGTH=220
Length = 219
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 59 ATSSLRDSSPNWSNRPPKETI-LLDGCDFEHWLVVVEXXXXXXXXXXXTRDEIIDGYIKT 117
+T S +S N+S+RPP E L GCD+EHWL+V++ T+ ++ID YI+T
Sbjct: 56 STYSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGA----TKQQMIDCYIQT 111
Query: 118 LAQVVGSEEEARHKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDY 177
LA+VVGSEEEA+ +IY+VS Y FG + EE S KL+ LP V +VLPDSY+D NKDY
Sbjct: 112 LAKVVGSEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDY 171
Query: 178 GGEPFINGEAVPYDPK 193
G E F+NGE V P+
Sbjct: 172 GAELFVNGEIVQRSPE 187
>AT1G53260.1 | chr1:19859393-19860421 REVERSE LENGTH=272
Length = 271
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/69 (82%), Positives = 66/69 (95%)
Query: 131 KIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGEPFINGEAVPY 190
KIYSVS + YFAFGALVSE+LS+K+KELPKV+WVLPDSYLD +NKDYGGEPFI+G+AVPY
Sbjct: 2 KIYSVSHKCYFAFGALVSEDLSHKIKELPKVKWVLPDSYLDGKNKDYGGEPFIDGKAVPY 61
Query: 191 DPKYHEEWV 199
DPKYHEEW+
Sbjct: 62 DPKYHEEWI 70
>AT1G72530.2 | chr1:27312999-27313937 FORWARD LENGTH=193
Length = 192
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 97/146 (66%), Gaps = 14/146 (9%)
Query: 60 TSSLRDSSPNWSN--RPPKETILLDGCDFEHWLVVVEXXXXXXXXXXXTRDEIIDGYIKT 117
+ S+ + +WS R P L++GCD++HWLV+++ TR+ I+ +++T
Sbjct: 29 SGSINSETTSWSELIRVPS---LVEGCDYKHWLVLMKPPNGYP-----TRNHIVQSFVET 80
Query: 118 LAQVVGSEEEARHKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDY 177
LA +GSEEEA+ IYSVST++Y+AFG + E L+YK++ LP V+WVLPDS++ + Y
Sbjct: 81 LAMALGSEEEAKRSIYSVSTKYYYAFGCRIHEPLTYKIRSLPDVKWVLPDSFIVDGDNRY 140
Query: 178 G----GEPFINGEAVPYDPKYHEEWV 199
G GEPF++GE VPYD KYH +W+
Sbjct: 141 GVFFAGEPFVDGEVVPYDEKYHADWL 166
>AT1G32580.1 | chr1:11784108-11785430 FORWARD LENGTH=230
Length = 229
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 88/135 (65%), Gaps = 5/135 (3%)
Query: 66 SSPNWSNRPPKETI-LLDGCDFEHWLVVVEXXXXXXXXXXXTRDEIIDGYIKTLAQVVGS 124
S N+S+R P E L GCD+EHWL+V++ T+ ++ID Y++TLA+++GS
Sbjct: 72 SGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENA----TKQQMIDCYVQTLAKIIGS 127
Query: 125 EEEARHKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGEPFIN 184
EEEA+ KIY+VS YF FG + EE S KL+ LP V ++LPDSY+D NKDYG E F+N
Sbjct: 128 EEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGAELFVN 187
Query: 185 GEAVPYDPKYHEEWV 199
GE V P+ + +
Sbjct: 188 GEIVQRPPERQRKII 202
>AT1G11430.1 | chr1:3847273-3848938 FORWARD LENGTH=233
Length = 232
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 9/123 (7%)
Query: 76 KETILLDGCDFEHWLVVVEXXXXXXXXXXXTRDEIIDGYIKTLAQVVGSEEEARHKIYSV 135
+ETI+L GCD+ HWL+V+E +RD++ID Y+ TLA V+GS EEA+ +Y+
Sbjct: 77 RETIMLPGCDYNHWLIVMEFPKDPAP----SRDQMIDTYLNTLATVLGSMEEAKKNMYAF 132
Query: 136 STRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGEPFINGEAVP-----Y 190
ST Y F + EE S K K LP V WVLPDSY+DV+NKDYGG+ +INGE +P Y
Sbjct: 133 STTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTY 192
Query: 191 DPK 193
PK
Sbjct: 193 QPK 195
>AT4G20020.1 | chr4:10844433-10846085 REVERSE LENGTH=420
Length = 419
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Query: 76 KETILLDGCDFEHWLVVVEXXXXXXXXXXXTRDEIIDGYIKTLAQVVG-SEEEARHKIYS 134
++T+L +GCD+ HWL+ ++ + +E++ Y +T AQ +G S EEA+ ++Y+
Sbjct: 77 EDTVLFEGCDYNHWLITMDFSKEETPK---SPEEMVAAYEETCAQGLGISVEEAKQRMYA 133
Query: 135 VSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGEPFING 185
ST Y F A+++E+ S K K+LP V ++LPDSY+D +NK+YGG+ + NG
Sbjct: 134 CSTTTYQGFQAIMTEQESEKFKDLPGVVFILPDSYIDPQNKEYGGDKYENG 184
>AT5G44780.1 | chr5:18068100-18070544 FORWARD LENGTH=724
Length = 723
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Query: 82 DGCDFEHWLVVVEXXXXXXXXXXXTRDEIIDGYIKTLAQVVG-SEEEARHKIYSVSTRHY 140
+GCDF HWL+ + +R+E+I + +T A+ + S EEA+ KIY++ T Y
Sbjct: 78 EGCDFNHWLITMNFPKDNLP----SREEMISIFEQTCAKGLAISLEEAKKKIYAICTTSY 133
Query: 141 FAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGEPFINGEAVP 189
F A ++ K ++LP V++++PDSY+DV NK YGG+ + NG P
Sbjct: 134 QGFQATMTIGEVEKFRDLPGVQYIIPDSYIDVENKVYGGDKYENGVITP 182
>AT3G20930.1 | chr3:7331739-7333749 FORWARD LENGTH=375
Length = 374
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 54 FATQPATSSLR------DSSPNWSNRPPKETILLDGCDFEHWLVVVEXXXXXXXXXXXTR 107
A+ P S+R N+ K L D +HW+V ++ T+
Sbjct: 135 LASLPGVVSIRPEQDYSSEKKNYGIGSHKGVSLFDHGTVKHWMVRIDKPGVGIV----TK 190
Query: 108 DEIIDGYIKTLAQVVGSEEEARHKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPD 167
+++D ++ L++V+ +E++A+ +Y VS + F F + E + +L +P V V+PD
Sbjct: 191 AQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERSAVELAGVPGVLAVVPD 250
Query: 168 SYLDVRNKDYGGE 180
+ + NKDY G+
Sbjct: 251 NSFESLNKDYEGD 263
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,153,820
Number of extensions: 167947
Number of successful extensions: 306
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 297
Number of HSP's successfully gapped: 12
Length of query: 396
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 295
Effective length of database: 8,337,553
Effective search space: 2459578135
Effective search space used: 2459578135
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)