BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0507100 Os09g0507100|Os09g0507100
(472 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360 141 9e-34
AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360 141 9e-34
AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989 131 7e-31
AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928 130 1e-30
AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397 130 2e-30
AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406 127 1e-29
AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420 125 4e-29
AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394 122 4e-28
AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036 120 1e-27
AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882 119 3e-27
AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334 118 7e-27
AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376 114 8e-26
AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132 114 1e-25
AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175 110 2e-24
AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182 109 3e-24
AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355 107 1e-23
AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819 91 1e-18
>AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360
Length = 359
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Query: 111 QCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDE 170
Q P C VDGC +D S R+YH+RHKVC+ HSKTPVV ++G + RFCQQCSRFH L EFDE
Sbjct: 97 QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDE 156
Query: 171 AKRSCRKRLDGHNRRRRKPQADSMSS-GSFMTSQQGTRFASFT 212
KRSCRKRLDGHNRRRRKPQ + + +F T QG++ F+
Sbjct: 157 GKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199
>AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360
Length = 359
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Query: 111 QCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDE 170
Q P C VDGC +D S R+YH+RHKVC+ HSKTPVV ++G + RFCQQCSRFH L EFDE
Sbjct: 97 QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDE 156
Query: 171 AKRSCRKRLDGHNRRRRKPQADSMSS-GSFMTSQQGTRFASFT 212
KRSCRKRLDGHNRRRRKPQ + + +F T QG++ F+
Sbjct: 157 GKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199
>AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989
Length = 988
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 65/84 (77%)
Query: 113 PSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAK 172
P C VD CK DLS +DYHRRHKVCE HSK +V + RFCQQCSRFHLL EFDE K
Sbjct: 80 PKCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGK 139
Query: 173 RSCRKRLDGHNRRRRKPQADSMSS 196
RSCR+RLDGHNRRRRK Q D+++S
Sbjct: 140 RSCRRRLDGHNRRRRKTQPDAITS 163
>AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928
Length = 927
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 70/98 (71%)
Query: 115 CAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAKRS 174
C VD C ADLSK +DYHRRHKVCE HSK +V G RFCQQCSRFH+L EFDE KRS
Sbjct: 127 CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRS 186
Query: 175 CRKRLDGHNRRRRKPQADSMSSGSFMTSQQGTRFASFT 212
CR+RL GHN+RRRK D++ +G+ M+ Q + + T
Sbjct: 187 CRRRLAGHNKRRRKANPDTIGNGTSMSDDQTSNYMLIT 224
>AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397
Length = 396
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 67/96 (69%)
Query: 96 STLKRPRXXXXXXXXQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRF 155
S + R + Q P C +DGC+ DLS +DYHR+H+VCE HSK P VVVSG E RF
Sbjct: 157 SVVARKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRF 216
Query: 156 CQQCSRFHLLGEFDEAKRSCRKRLDGHNRRRRKPQA 191
CQQCSRFH + EFDE KRSCRKRL HN RRRKPQ
Sbjct: 217 CQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQG 252
>AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406
Length = 405
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%)
Query: 111 QCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDE 170
Q P C V GC DLS +DYH+RH+VCE HSKT VV+V+G E RFCQQCSRFH L EFD+
Sbjct: 120 QNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDD 179
Query: 171 AKRSCRKRLDGHNRRRRKP 189
KRSCR+RL GHN RRRKP
Sbjct: 180 GKRSCRRRLAGHNERRRKP 198
>AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420
Length = 419
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 111 QCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDE 170
Q P C V+GC DLS +DYHR+H++CE HSK P VVVSG E RFCQQCSRFH L EFDE
Sbjct: 165 QTPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDE 224
Query: 171 AKRSCRKRLDGHNRRRRKPQADSMSSGSFMTSQQGTRFASFTPPRPEP-SWP 221
KRSCR+RL HN RRRKP G RFA P E WP
Sbjct: 225 KKRSCRRRLSDHNARRRKPNPGRTYDGKPQVDFVWNRFALIHPRSEEKFIWP 276
>AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394
Length = 393
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 60/79 (75%)
Query: 113 PSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAK 172
P C +DGC+ DLS + YHR+HKVCE HSK P V VSG E RFCQQCSRFH + EFDE K
Sbjct: 173 PRCQIDGCELDLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKK 232
Query: 173 RSCRKRLDGHNRRRRKPQA 191
RSCRKRL HN RRRKPQ
Sbjct: 233 RSCRKRLSHHNARRRKPQG 251
>AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036
Length = 1035
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 113 PSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAK 172
P C VD C DLS +DYHRRHKVCE HSK +V + RFCQQCSRFHLL EFDE K
Sbjct: 118 PMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGK 177
Query: 173 RSCRKRLDGHNRRRRK-PQADSMSSG 197
RSCR+RL GHNRRRRK Q + ++SG
Sbjct: 178 RSCRRRLAGHNRRRRKTTQPEEVASG 203
>AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882
Length = 881
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%)
Query: 115 CAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAKRS 174
C V+ C+ADLSK +DYHRRHKVCE HSK V G RFCQQCSRFHLL EFDE KRS
Sbjct: 106 CQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRS 165
Query: 175 CRKRLDGHNRRRRKPQADSMSSGS 198
CR+RL GHN+RRRK + ++G+
Sbjct: 166 CRRRLAGHNKRRRKTNPEPGANGN 189
>AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334
Length = 333
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 58/89 (65%)
Query: 100 RPRXXXXXXXXQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQC 159
RP P C +GC ADLS + YHRRHKVCE HSK VV +G RFCQQC
Sbjct: 173 RPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQC 232
Query: 160 SRFHLLGEFDEAKRSCRKRLDGHNRRRRK 188
SRFHLL EFD KRSCRKRL HNRRRRK
Sbjct: 233 SRFHLLSEFDNGKRSCRKRLADHNRRRRK 261
>AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376
Length = 375
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 65/97 (67%)
Query: 99 KRPRXXXXXXXXQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQ 158
+R R Q P C V+GC DL+ + Y+ RH+VC HSKTP V V+G E RFCQQ
Sbjct: 58 RRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQ 117
Query: 159 CSRFHLLGEFDEAKRSCRKRLDGHNRRRRKPQADSMS 195
CSRFH L EFD KRSCR+RL GHN RRRKPQ S+S
Sbjct: 118 CSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLS 154
>AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132
Length = 131
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 59/78 (75%)
Query: 115 CAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAKRS 174
C V+ C AD+SK + YH+RHKVC+ H+K P V +SG RFCQQCSRFH L EFDEAKRS
Sbjct: 54 CQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRS 113
Query: 175 CRKRLDGHNRRRRKPQAD 192
CR+RL GHN RRRK D
Sbjct: 114 CRRRLAGHNERRRKSTTD 131
>AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175
Length = 174
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 71/117 (60%), Gaps = 11/117 (9%)
Query: 115 CAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAKRS 174
C VD C AD+ + + YHRRHKVCE H+K V +SG RFCQQCSRFH L EFDEAKRS
Sbjct: 54 CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRS 113
Query: 175 CRKRLDGHNRRRRKPQADS----------MSSGSFMTSQQGTRFASFTPPRPEPSWP 221
CR+RL GHN RRRK +S ++ M +Q+ +R T P P S+
Sbjct: 114 CRRRLAGHNERRRKSSGESTYGEGSGRRGINGQVVMQNQERSR-VEMTLPMPNSSFK 169
>AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182
Length = 181
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 59/84 (70%)
Query: 115 CAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAKRS 174
C VD C +L++ + Y+RRH+VCE H+K V+G RFCQQCSRFH L EFDEAKRS
Sbjct: 63 CQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRS 122
Query: 175 CRKRLDGHNRRRRKPQADSMSSGS 198
CR+RL GHN RRRK DS GS
Sbjct: 123 CRRRLAGHNERRRKISGDSFGEGS 146
>AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355
Length = 354
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%)
Query: 115 CAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAKRS 174
C V+GC+ DLS + Y+ RHKVC HSK+ V+VSG RFCQQCSRFH L EFD KRS
Sbjct: 59 CQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKRS 118
Query: 175 CRKRLDGHNRRRRKPQ 190
CR+RL HN RRRKPQ
Sbjct: 119 CRRRLACHNERRRKPQ 134
>AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819
Length = 818
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 115 CAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAKRS 174
C V C+AD+S+ + YH+RH+VC + VV+ G R+CQQC +FHLL +FDE KRS
Sbjct: 138 CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRS 197
Query: 175 CRKRLDGH-NRRRRKPQADSMSSGSFMTSQQ 204
CR++L+ H NRR+RKP + G QQ
Sbjct: 198 CRRKLERHNNRRKRKP----VDKGGVAAEQQ 224
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,962,773
Number of extensions: 216380
Number of successful extensions: 437
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 437
Number of HSP's successfully gapped: 17
Length of query: 472
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 370
Effective length of database: 8,310,137
Effective search space: 3074750690
Effective search space used: 3074750690
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)