BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0506800 Os09g0506800|AK064028
         (609 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67370.1  | chr1:25239347-25243713 REVERSE LENGTH=597          609   e-174
AT4G32200.1  | chr4:15548840-15554962 FORWARD LENGTH=1400         240   2e-63

>AT1G67370.1 | chr1:25239347-25243713 REVERSE LENGTH=597
          Length = 596

 Score =  609 bits (1570), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 332/600 (55%), Positives = 425/600 (70%), Gaps = 21/600 (3%)

Query: 1   MVMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLM 60
           MVMAQK KEAEITEQDSLLLTRNLLRIAI+NISYIRGLFPEKYFNDKSVPAL+MKIKKLM
Sbjct: 1   MVMAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALDMKIKKLM 60

Query: 61  PMDTESRRLIDWMEKGVYDALQKKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTSGDEVA 120
           PMD ESRRLIDWMEKGVYDALQ+KYLKTL+F ICE  +GPMIEEY+FSFSY ++   +V 
Sbjct: 61  PMDAESRRLIDWMEKGVYDALQRKYLKTLMFSICETVDGPMIEEYSFSFSYSDSDSQDVM 120

Query: 121 MNLSRTGSKKNSATFKSNAAEVTPDQMRSSACKMIRTLVSLMRTLDQMPEERTILMKLLY 180
           MN++RTG+KKN   F S  A++TP+QMRSSACKM+RTLV LMRTLD+MP+ERTI+MKLLY
Sbjct: 121 MNINRTGNKKNGGIFNS-TADITPNQMRSSACKMVRTLVQLMRTLDKMPDERTIVMKLLY 179

Query: 181 YDDVTPEDYEPPFFKCCADNEAINIWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCDDNN 240
           YDDVTP DYEPPFF+ C ++EA  +W KNPL+ME+GNVNSKHLVL LKVKSVLDPC+D N
Sbjct: 180 YDDVTPPDYEPPFFRGCTEDEAQYVWTKNPLRMEIGNVNSKHLVLTLKVKSVLDPCEDEN 239

Query: 241 VNSEDDNMSLDNES---DQDNDFSDTEVRPSEAERYIVAPNDGTCKGQNGTISEDDTQDP 297
            + +DD  S+  +S   DQ +D SD+E+  ++  ++IVAP +           +D+TQDP
Sbjct: 240 DDMQDDGKSIGPDSVHDDQPSD-SDSEISQTQENQFIVAPVEKQDDDDGEVDEDDNTQDP 298

Query: 298 VHEEELTAQVREWICSRDTESLEVSDVLVNFPDISMEMVEDIMERLLKDGLLSRAKKDSY 357
              E+  A+V++WI SR  ++LE++D+L NFPDIS+ + E+IM++L+ +G+LS+  KD Y
Sbjct: 299 AENEQQLARVKDWINSRHLDTLELTDILANFPDISIVLSEEIMDQLVTEGVLSKTGKDMY 358

Query: 358 SVNKIADPTT--PHIKKEVIMQNVSPTEGTKNSNGDLMYMKALYHALPMDYVSVGKLHGK 415
              +   P +    +K+E   Q +SP  G   +  D +YMKALYH+LPM YV++ KLH  
Sbjct: 359 IKKRDKTPESEFTFVKEEADGQ-ISP--GKSVAPEDYLYMKALYHSLPMKYVTITKLHNM 415

Query: 416 LDGEASQNMVRKLIEKMVQDGYVKNSANRRLGKAVIHSEVTNRKLLEIKKILEVDIAEQM 475
           LDGEA+Q  VRKL+++M Q+GYV+ S+NRRLGK VIHS +T +KL E++K+L  D  +  
Sbjct: 416 LDGEANQTAVRKLMDRMTQEGYVEASSNRRLGKRVIHSSLTEKKLNEVRKVLATDDMDVD 475

Query: 476 AIDTNAEPGEPERKDHLSGHEMRDGSTMGCLQSVGSDLTRTRELPEP-QQNVSMQSGQEA 534
             +T  +   P+ K         D ST G + S+GSD TRT+      QQN S+ S Q  
Sbjct: 476 VTETINKTNGPDAK------VTADVSTCGGIHSIGSDFTRTKGRSGGMQQNGSVLSEQTI 529

Query: 535 STVDKDPSRTPTSVREASVCSLESGVLGQKVRKSLAGAGGTQCSQDKRFRKASTVKEPIL 594
           S        TP S +     S ES  +     K       +Q SQD+R RK S V+EPIL
Sbjct: 530 SKA----GNTPISNKAQPAASRESFAVHGGAVKEAETVNCSQASQDRRGRKTSMVREPIL 585



>AT4G32200.1 | chr4:15548840-15554962 FORWARD LENGTH=1400
          Length = 1399

 Score =  240 bits (612), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/284 (50%), Positives = 180/284 (63%), Gaps = 29/284 (10%)

Query: 14  EQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDTESRRLIDWM 73
           EQ SL+LT  LLR AI+NISYIRGLFP +YF D SVPAL++K+KKLMPMD ESRRLI WM
Sbjct: 9   EQQSLILTTELLRTAIFNISYIRGLFPVRYFKDMSVPALDLKMKKLMPMDAESRRLIGWM 68

Query: 74  EKGVYDALQKKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTSGDEVAMNLSRTGSKKNSA 133
           EKGVYDAL KK+LK L+F ICE  +GP+IEEY FSFSY ++   +V MN++ TG      
Sbjct: 69  EKGVYDALHKKHLKKLIFYICETVDGPLIEEYIFSFSYSDSDSQDVRMNINITGINTYGG 128

Query: 134 TFKSNA----AEVTPDQMRS------SACKMIRTLVSLMRTLDQM--------------P 169
           T  S A    A++T +QM S         +     V+  R    +               
Sbjct: 129 TLNSTADNSTADMTLNQMSSVDEDFGQNARRSNAFVTYQRFSVYISFHIANYRLCYFFAS 188

Query: 170 EERTILMKLLYYDDVTPEDYEPPFFKCCA-DNEAINIWNKNPLKMEVGNVNSKHLVLALK 228
            +RTILMKLLYY+ V P DY+PPFF+ C+ + EA  +W K PL+ME+GNVNS+H VL +K
Sbjct: 189 VQRTILMKLLYYEYVPP-DYQPPFFRGCSEEEEAQYVWPKIPLRMEIGNVNSQHHVLTVK 247

Query: 229 VKSVL---DPCDDNNVNSEDDNMSLDNESDQDNDFSDTEVRPSE 269
           VKSVL   DPC+D N N +DD  S   +S  D+       +PS+
Sbjct: 248 VKSVLDPYDPCEDENDNMQDDERSKGPDSLHDDQPCKVFTKPSK 291



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.312    0.129    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,080,831
Number of extensions: 577673
Number of successful extensions: 1955
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1948
Number of HSP's successfully gapped: 3
Length of query: 609
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 505
Effective length of database: 8,255,305
Effective search space: 4168929025
Effective search space used: 4168929025
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 115 (48.9 bits)