BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0505400 Os09g0505400|Os09g0505400
(398 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16530.1 | chr5:5400735-5402626 FORWARD LENGTH=352 270 9e-73
AT5G15100.1 | chr5:4892159-4893937 REVERSE LENGTH=368 154 1e-37
AT1G77110.1 | chr1:28970855-28974408 FORWARD LENGTH=571 125 5e-29
AT5G57090.1 | chr5:23100765-23104456 FORWARD LENGTH=648 101 7e-22
AT2G01420.2 | chr2:180478-183199 REVERSE LENGTH=617 99 4e-21
AT1G73590.1 | chr1:27659772-27662876 FORWARD LENGTH=623 98 8e-21
AT1G23080.1 | chr1:8180768-8183406 REVERSE LENGTH=620 97 2e-20
AT1G70940.1 | chr1:26743170-26745871 FORWARD LENGTH=641 96 2e-20
>AT5G16530.1 | chr5:5400735-5402626 FORWARD LENGTH=352
Length = 351
Score = 270 bits (690), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 161/400 (40%), Positives = 203/400 (50%), Gaps = 64/400 (16%)
Query: 1 MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXX 60
M PLY AL LGYGSV+WW +FT DQCDA+NRLV +DPF ++YR
Sbjct: 14 MVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPFNMNYRFIA 73
Query: 61 XXXXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPL 120
+ + W IT FSL TL N+LVVGVPL
Sbjct: 74 ADVLSKVIIVTVLALWAKYSNKG-------------SYCWSITSFSLCTLTNSLVVGVPL 120
Query: 121 LDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRRXXXXXXXXXXXXXXXXXXXXXXXX 180
AMYG+ A DL+VQ SV Q IV+ LLL E R+
Sbjct: 121 AKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKAGFSSNNISDVQVDNINIESGKRE 180
Query: 181 XXXXXXXXXRRSLWPLVRAVWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLI 240
+S ++ VWLK+A NPN Y+ +LG+AWA ++NRWH+E P I+EGS+LI
Sbjct: 181 TVVVG----EKSFLEVMSLVWLKLATNPNCYSCILGIAWAFISNRWHLELPGILEGSILI 236
Query: 241 MSKTGVGLSMFSMGLFMALQDKIIVCGAGLTVLGMALRXXXXXXXXXXXXXXXXXXXXXX 300
MSK G G +MF+MG+FMALQ+K+IVCG LTV+GM L+
Sbjct: 237 MSKAGTGTAMFNMGIFMALQEKLIVCGTSLTVMGMVLKF--------------------- 275
Query: 301 XXXXXQAYTHLHEIHSPSSFFLLSPEICLNSNGCMHDTSPHDETARDE--QAALPQSITT 358
I P++ + S + L H + R QAALPQSIT+
Sbjct: 276 -------------IAGPAAMAIGSIVLGL-----------HGDVLRVAIIQAALPQSITS 311
Query: 359 FVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGFIR 398
F+FAKEYGLHA++LSTAVIFG L SLPVL+ YY L FI
Sbjct: 312 FIFAKEYGLHADVLSTAVIFGMLVSLPVLVAYYAALEFIH 351
>AT5G15100.1 | chr5:4892159-4893937 REVERSE LENGTH=368
Length = 367
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 170/401 (42%), Gaps = 60/401 (14%)
Query: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXXXX 62
PLY ++ LG+ S R +LF+ +QC +N+ V +PF +S ++
Sbjct: 16 PLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIISENNPFKMSPKLILSD 75
Query: 63 XXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPLLD 122
W ITG S++ L NTL++G+P+L
Sbjct: 76 ILQKFLVVVVLAMVLRFWHPTGGRGGK--------LGWVITGLSISVLPNTLILGMPILS 127
Query: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRRXXXXXXXXXX-------XXXXXXXXX 175
A+YG A ++ QI V+Q+++++ +LL FE+
Sbjct: 128 AIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARALPSSGASLEHTGNDQEEANIEDE 187
Query: 176 XXXXXXXXXXXXXXRRSL--WPLVRAVWLKVARNPNVYAGVLGVAWACVTNRWHVETPSI 233
RS+ ++ W K+ NPN YA ++G+ WA + R P +
Sbjct: 188 PKEEEDEEEVAIVRTRSVGTMKILLKAWRKLIINPNTYATLIGIIWATLHFRLGWNLPEM 247
Query: 234 IEGSVLIMSKTGVGLSMFSMGLFMALQDKIIVCGAGLTVLGMALRXXXXXXXXXXXXXXX 293
I+ S+ ++S G+G++MFS+GLFMA Q II CG + ++ M L+
Sbjct: 248 IDKSIHLLSDGGLGMAMFSLGLFMASQSSIIACGTKMAIITMLLK--------------- 292
Query: 294 XXXXXXXXXXXXQAYTHLHEIHSPSSFFLLSPEICLNSNGCMHDTSPHDETARDEQAALP 353
F+L P + + S C+ S + A QAALP
Sbjct: 293 ---------------------------FVLGPALMIASAYCIRLKSTLFKVA-ILQAALP 324
Query: 354 QSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVL 394
Q + FVFAKEY LH EI+ST VIFG L +LP + YY +L
Sbjct: 325 QGVVPFVFAKEYNLHPEIISTGVIFGMLIALPTTLAYYFLL 365
>AT1G77110.1 | chr1:28970855-28974408 FORWARD LENGTH=571
Length = 570
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 45/194 (23%)
Query: 203 KVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMALQDK 262
K++RNPN Y+ +LG+ W+ ++ +W++ P+I++ S+ I+S G+G++MFS+GLFMALQ K
Sbjct: 420 KLSRNPNTYSSLLGLVWSLISFKWNIPMPNIVDFSIKIISDAGLGMAMFSLGLFMALQPK 479
Query: 263 IIVCGAGLTVLGMALRXXXXXXXXXXXXXXXXXXXXXXXXXXXQAYTHLHEIHSPSSFFL 322
+I CGA +GM +R I P F+
Sbjct: 480 MIPCGAKKATMGMLIRF----------------------------------ISGP--LFM 503
Query: 323 LSPEICLNSNGC-MHDTSPHDETARDEQAALPQSITTFVFAKEYGLHAEILSTAVIFGTL 381
+ + G +H A QAALPQ I FVFA+EY LH ++LST VIFG +
Sbjct: 504 AGASLLVGLRGSRLH--------AAIVQAALPQGIVPFVFAREYNLHPDLLSTLVIFGMI 555
Query: 382 ASLPVLIVYYIVLG 395
SLPV I+YY++LG
Sbjct: 556 VSLPVTILYYVLLG 569
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 1 MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXX 60
MAPLYFA+ + YGSV+W ++FT QC +NR V + +P+ +
Sbjct: 14 MAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFISQNNPYKMDTMFIL 73
Query: 61 XXXXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPL 120
W IT FS+ATL NTLV+G+PL
Sbjct: 74 ADTLSKIFVFVLLSLWAVFFKA-------------GGLDWLITLFSIATLPNTLVMGIPL 120
Query: 121 LDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
L AMYG + + L+VQ+ V+Q I+++ LLL FE+R
Sbjct: 121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELR 155
>AT5G57090.1 | chr5:23100765-23104456 FORWARD LENGTH=648
Length = 647
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 1 MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXX 60
M PLY A+ L YGSVRWW +FT DQC +NR V DP+A++Y
Sbjct: 14 MVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFLA 73
Query: 61 XXXXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPL 120
W IT FSL+TL NTLV+G+PL
Sbjct: 74 ADSLQKVVIL-------------AALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120
Query: 121 LDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
L AMYG ++ +L+VQI V+Q+I+++ L+L FE R
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFR 155
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ + G+AW+ V+ +W+++ P+I+ GS+ I+S G+G++MFS+GLFMAL
Sbjct: 494 VWRKLIRNPNTYSSLFGLAWSLVSFKWNIKMPTIMSGSISILSDAGLGMAMFSLGLFMAL 553
Query: 260 QDKIIVCGAGLTVLGMALR 278
Q KII CG + MA+R
Sbjct: 554 QPKIIACGKSVAGFAMAVR 572
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 349 QAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGF 396
QAALPQ I FVFAKEY +H +ILSTAVIFG L +LPV ++YY++LG
Sbjct: 600 QAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPVTVLYYVLLGL 647
>AT2G01420.2 | chr2:180478-183199 REVERSE LENGTH=617
Length = 616
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXXXX 62
PLY A+ L YGSV+WW++F+ DQC +NR V DP+A+++R
Sbjct: 16 PLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNFRFVAAD 75
Query: 63 XXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPLLD 122
W IT FSL+TL NTLV+G+PLL
Sbjct: 76 TLQKIIMLVLLALWANLTKNGS-------------LEWMITIFSLSTLPNTLVMGIPLLI 122
Query: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
AMYG +A L+VQ+ V+Q I+++ LLL FE R
Sbjct: 123 AMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYR 155
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ ++G+ WA V RWHV P I++ S+ I+S G+G++MFS+GLFMAL
Sbjct: 463 VWRKLIRNPNTYSSLIGLIWALVAYRWHVAMPKILQQSISILSDAGLGMAMFSLGLFMAL 522
Query: 260 QDKIIVCGAGLTVLGMALR 278
Q KII CG + MA+R
Sbjct: 523 QPKIIACGNSVATFAMAVR 541
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 37/48 (77%)
Query: 349 QAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGF 396
QAALPQ I FVFAKEY +H ILST VIFG L +LP+ +VYYI+LG
Sbjct: 569 QAALPQGIVPFVFAKEYNVHPTILSTGVIFGMLIALPITLVYYILLGL 616
>AT1G73590.1 | chr1:27659772-27662876 FORWARD LENGTH=623
Length = 622
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 1 MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXX 60
M PLY A+ L YGSV+WW++FT DQC +NR V +P+A++ R
Sbjct: 14 MVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIAANNPYAMNLRFLA 73
Query: 61 XXXXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPL 120
W IT FSL+TL NTLV+G+PL
Sbjct: 74 ADSLQKVIVLSLLFLWCKLSRNGS-------------LDWTITLFSLSTLPNTLVMGIPL 120
Query: 121 LDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
L MYG ++ DL+VQI V+Q I+++ L+L FE R
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYR 155
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 51/68 (75%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ + G+ W+ ++ +W++E P++I S+ I+S G+G++MFS+GLFMAL
Sbjct: 469 VWRKLIRNPNSYSSLFGITWSLISFKWNIEMPALIAKSISILSDAGLGMAMFSLGLFMAL 528
Query: 260 QDKIIVCG 267
+II CG
Sbjct: 529 NPRIIACG 536
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 349 QAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGF 396
QAALPQ I FVFAKEY +H +ILSTAVIFG L +LP+ ++YYI+LG
Sbjct: 575 QAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLLYYILLGL 622
>AT1G23080.1 | chr1:8180768-8183406 REVERSE LENGTH=620
Length = 619
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXXXX 62
PLY A+ L YGSVRWW++F+ DQC +NR V +P+A++ R
Sbjct: 16 PLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNPYAMNLRFIAAD 75
Query: 63 XXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPLLD 122
TR W IT FSL+TL NTLV+G+PLL
Sbjct: 76 TLQKLIMLTLLIIWANF--TRSGS-----------LEWSITIFSLSTLPNTLVMGIPLLI 122
Query: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
AMYG+++ L+VQI V+Q I+++ LLL FE R
Sbjct: 123 AMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYR 155
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ ++G+ WA V RW V P II+ S+ I+S G+G++MFS+GLFMAL
Sbjct: 466 VWRKLIRNPNTYSSLIGLIWALVAFRWDVAMPKIIQQSISILSDAGLGMAMFSLGLFMAL 525
Query: 260 QDKIIVCGAGLTVLGMALR 278
Q K+I CG MA+R
Sbjct: 526 QPKLIACGNSTATFAMAVR 544
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 37/48 (77%)
Query: 349 QAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGF 396
QAALPQ I FVFAKEY +H ILST VIFG L +LP+ +VYYI+LG
Sbjct: 572 QAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL 619
>AT1G70940.1 | chr1:26743170-26745871 FORWARD LENGTH=641
Length = 640
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXXXX 62
PLY A+ L YGSVRWW++F+ DQC +NR V +P+A++ R
Sbjct: 16 PLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYAMNLRFIAAD 75
Query: 63 XXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPLLD 122
TR W IT FSL+TL NTLV+G+PLL
Sbjct: 76 TLQKIIMLSLLVLWANF--TRSGS-----------LEWSITIFSLSTLPNTLVMGIPLLI 122
Query: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
AMYG+++ L+VQI V+Q I+++ LLL FE R
Sbjct: 123 AMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFR 155
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ ++G+ WA V RWHV P II+ S+ I+S G+G++MFS+GLFMAL
Sbjct: 487 VWRKLIRNPNTYSSLIGLIWALVAFRWHVAMPKIIQQSISILSDAGLGMAMFSLGLFMAL 546
Query: 260 QDKIIVCGAGLTVLGMALR 278
Q K+I CG + MA+R
Sbjct: 547 QPKLIACGNSVATFAMAVR 565
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 37/47 (78%)
Query: 349 QAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLG 395
QAALPQ I FVFAKEY +H ILST VIFG L +LP+ +VYYI+LG
Sbjct: 593 QAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLG 639
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.328 0.140 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,943,757
Number of extensions: 181030
Number of successful extensions: 451
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 451
Number of HSP's successfully gapped: 31
Length of query: 398
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 297
Effective length of database: 8,337,553
Effective search space: 2476253241
Effective search space used: 2476253241
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 113 (48.1 bits)