BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0502500 Os09g0502500|AK109664
(340 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G13010.1 | chr4:7600682-7602567 FORWARD LENGTH=330 362 e-100
AT1G23740.1 | chr1:8398245-8399656 REVERSE LENGTH=387 93 2e-19
AT4G21580.1 | chr4:11475822-11477514 FORWARD LENGTH=326 80 2e-15
AT1G49670.2 | chr1:18381591-18386021 REVERSE LENGTH=653 75 7e-14
AT3G15090.1 | chr3:5076847-5078870 FORWARD LENGTH=367 69 3e-12
AT5G61510.1 | chr5:24737084-24738975 REVERSE LENGTH=407 68 8e-12
>AT4G13010.1 | chr4:7600682-7602567 FORWARD LENGTH=330
Length = 329
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/332 (55%), Positives = 235/332 (70%), Gaps = 9/332 (2%)
Query: 6 RRMRAVQYDKYGGGAQALKHVEVPIPTPKKGEVLIKMEAGSINQVDWKFQKGVARPFMPN 65
+ M A+QY+ YGGGA L+HV+VP+PTPK EV +K+EA S+N VDWK QKG+ RPF+P
Sbjct: 4 KLMHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPR 63
Query: 66 KFPFIPVYDLAGEVVELGRGVSSFKVGDKVIAI-NFPGGGGLAEYAVAQASRTAPRPPEV 124
KFP IP D+AGEVVE+G GV +FK GDKV+A+ + GGGGLAE+AVA T RP EV
Sbjct: 64 KFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVATEKLTVKRPQEV 123
Query: 125 SAAVGACLPIXXXXXXXXXXX-XGVSLXXXXXXXXXXXXNVLVTAASGGVGHFAVQLASA 183
AA A LP+ G+ L N+LVTAASGGVGH+AVQLA
Sbjct: 124 GAAEAAALPVAGLTALQALTNPAGLKL-----DGTGKKANILVTAASGGVGHYAVQLAKL 178
Query: 184 AGHRVTATCGARNAGLVGGLGADKVLDYATPEGAALRSPSGRRYDAVVHCAAVAGLPWSA 243
A VTATCGARN V LGAD+VLDY TPEGAAL+SPSG++YDAVVHCA G+P+S
Sbjct: 179 ANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCA--NGIPFSV 236
Query: 244 FAPVLADAGVVVDLTPGAAAFATALRQRVTFSRKRLVPLFVSPTKEDMELVAGMVAEGKL 303
F P L++ G V+D+TPG A T +++T S+K+LVPL + P E++E + +V EGK+
Sbjct: 237 FEPNLSENGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKV 296
Query: 304 RAVIESRHPLSRAEEGWARSMAGHATGKIIVE 335
+ VI+S+HPLS+AE+ WA+S+ GHATGKIIVE
Sbjct: 297 KTVIDSKHPLSKAEDAWAKSIDGHATGKIIVE 328
>AT1G23740.1 | chr1:8398245-8399656 REVERSE LENGTH=387
Length = 386
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 146/344 (42%), Gaps = 44/344 (12%)
Query: 2 ATSSRRMRAVQYDKYGGGAQALKHVEVPIPTPKKGEVLIKMEAGSINQVDWKFQKGVARP 61
A+ + M+A Y YGG + +P K+ +VLIK+ A ++N VD K ++G +
Sbjct: 72 ASIPKEMKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKA 131
Query: 62 FMPNKFPFIPVYDLAGEVVELGRGVSSFKVGDKVI------AINFPGG-GGLAEYAVAQA 114
+ P +P YD+AG VV++G V K GD+V A+ P G LAEY +
Sbjct: 132 -TDSPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEE 190
Query: 115 SRTAPRPPEVSAAVGACLPIXXXXXXXXXXXXGVSLXXXXXXXXXXXXNVLVTAASGGVG 174
A +P + A A LP+ S ++LV +GGVG
Sbjct: 191 KLLALKPKNIDFAQAAGLPLAIETADEGLVRTEFS----------AGKSILVLNGAGGVG 240
Query: 175 HFAVQLASAA--GHRVTATCGARNAGLVGGLGADKVLDYATPEGAALRSPSGRRYDAVVH 232
+QLA +V AT LV LGAD +DY L +DA+
Sbjct: 241 SLVIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGM 300
Query: 233 CAAVAGLPWSAFAPVLADAGVVVDLTPGAAAFATALRQRVTFSRKRLVPLFVSPTKEDME 292
C V+ + G VV LT GA VT R V V+ + ++
Sbjct: 301 CDKAVK--------VIKEGGKVVALT-GA----------VTPPGFRFV---VTSNGDVLK 338
Query: 293 LVAGMVAEGKLRAVIESR--HPLSRAEEGWARSMAGHATGKIIV 334
+ + GK++ V++ + P SR + ++ HATGK++V
Sbjct: 339 KLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNHATGKVVV 382
>AT4G21580.1 | chr4:11475822-11477514 FORWARD LENGTH=326
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 144/330 (43%), Gaps = 27/330 (8%)
Query: 18 GGAQALKHVEVPIPTPKKGEVLIKMEAGSINQVDWKFQKGVARPFMPNKFPFIPVYDLAG 77
G + L+ +V P K EVLI++ A ++N+ D + G+ P P P++ + + +G
Sbjct: 10 GKPEVLQLRDVADPEVKDDEVLIRVLATALNRADTLQRLGLYNP-PPGSSPYLGL-ECSG 67
Query: 78 EVVELGRGVSSFKVGDKVIAINFPGGGGLAEYAVAQASRTAPRPPEVSAAVGACLPIXXX 137
+ +G+GVS +KVGD+V A+ GGG AE A + P P +S A P
Sbjct: 68 TIESVGKGVSRWKVGDQVCAL--LSGGGYAEKVSVPAGQIFPIPAGISLKDAAAFPEVAC 125
Query: 138 XXXXXXXXXGVSLXXXXXXXXXXXXNVLVTAASGGVGHFAVQLASAAGHRVTATCGA-RN 196
G + L+ S G+G FA+Q+A G RV T G+
Sbjct: 126 TVWSTVFMMG---------RLSVGESFLIHGGSSGIGTFAIQIAKHLGVRVFVTAGSDEK 176
Query: 197 AGLVGGLGADKVLDYATPEGAA--LRSPSGRRYDAVVHCAAVAGLPWSAFAPVLADAGVV 254
LGAD ++Y T + A G+ D ++ C L + + +
Sbjct: 177 LAACKELGADVCINYKTEDFVAKVKAETDGKGVDVILDCIGAPYLQKNLDSLNFDGRLCI 236
Query: 255 VDLTPGAAA---FATALRQRVTFSRKRLVPLFVSP------TKEDMELVAGMVAEGKLRA 305
+ L GA A ++ L +R+T L P SP +E + V + GK++
Sbjct: 237 IGLMGGANAEIKLSSLLPKRLTVLGAALRPR--SPENKAVVVREVEKNVWPAIEAGKVKP 294
Query: 306 VIESRHPLSRAEEGWARSMAGHATGKIIVE 335
VI PLS+A EG + + + GKI++E
Sbjct: 295 VIYKYLPLSQAAEGHSLMESSNHIGKILLE 324
>AT1G49670.2 | chr1:18381591-18386021 REVERSE LENGTH=653
Length = 652
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 136/329 (41%), Gaps = 38/329 (11%)
Query: 37 EVLIKMEAGSINQVDWKFQKGVARPFMPNKFPFIPVYDLAGEVVELGRGVSSFKVGDKVI 96
+VL+K+ +N D F G K PF ++ G + +G V + +VG
Sbjct: 318 QVLLKIIYAGVNASDVNFSSGRYFTGGSPKLPFDAGFEGVGLIAAVGESVKNLEVGTPAA 377
Query: 97 AINFPGGGGLAEYAVAQASRTAPRP---PEVSAAVGACLPIXXXXXX---------XXXX 144
+ F G +EY + + P P PEV A + + L
Sbjct: 378 VMTF---GAYSEYMIVSSKHVLPVPRPDPEVVAMLTSGLTALIALEKLYDILKLLVQLSL 434
Query: 145 XXGVSLXXXXXXXXXXXXNVLVTAASGGVGHFAVQLASAAGHRVTATC-GARNAGLVGGL 203
+S VLVTAA+GG G FAVQLA +G++V ATC G+ A L+ L
Sbjct: 435 TFSLSYGNSQAGQMKSGETVLVTAAAGGTGQFAVQLAKLSGNKVIATCGGSEKAKLLKEL 494
Query: 204 GADKVLDYAT-----------PEGAAL--RSPSGRRYDAVVHCAAVAG--LPWSAFAPVL 248
G D+V+DY + P+G + S G+ +D ++ AV G + +
Sbjct: 495 GVDRVIDYKSENIKTVLKKEFPKGVNIIYESVGGQMFDMCLNALAVYGRLIVIGMISQYQ 554
Query: 249 ADAGVVVDLTPGAAAFATALRQRVT-FSRKRLVPLFVSPTKEDMELVAGMVAEGKLRAVI 307
+ G PG A Q V F + L+ K++++ + + A GKL+ I
Sbjct: 555 GEKGWEPAKYPGLCEKILAKSQTVAGFFLVQYSQLW----KQNLDKLFNLYALGKLKVGI 610
Query: 308 ESRH--PLSRAEEGWARSMAGHATGKIIV 334
+ + L+ + +G +TGK++V
Sbjct: 611 DQKKFIGLNAVADAVEYLHSGKSTGKVVV 639
>AT3G15090.1 | chr3:5076847-5078870 FORWARD LENGTH=367
Length = 366
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 11/209 (5%)
Query: 9 RAVQYDKYGGGAQALKHVEVPIPTPKKGEVLIKMEAGSINQVDWKFQKGVARPFMPNKFP 68
RAV ++GG VP+P EVL+K +A S+N +D + + G R P
Sbjct: 33 RAVILPRFGGPEVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVFQPHLP 92
Query: 69 FIPVYDLAGEVVELGRGVSSFKVGDKVIAINFPGG--GGLAEYAVAQASRTAPRPPEVSA 126
I D++GEV +G V S KVG +V P G +Y + +P +S
Sbjct: 93 IIVGRDVSGEVAAIGTSVKSLKVGQEVFGALHPTALRGTYTDYGILSEDELTEKPSSISH 152
Query: 127 AVGACLPIXXXXXXXXXXXXGVSLXXXXXXXXXXXXNVLVTAASGGVGHFAVQLASAAGH 186
+ +P +LV G VG A+QLA A+G
Sbjct: 153 VEASAIPFAALTAWRALKSNA---------RITEGQRLLVFGGGGAVGFSAIQLAVASGC 203
Query: 187 RVTATCGARNAGLVGGLGADKVLDYATPE 215
VTA+C + + GA++ +DY T +
Sbjct: 204 HVTASCVGQTKDRILAAGAEQAVDYTTED 232
>AT5G61510.1 | chr5:24737084-24738975 REVERSE LENGTH=407
Length = 406
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 13/174 (7%)
Query: 18 GGAQALKHVEVPIPTPKKGEVLIKMEAGSINQVDWKFQKGVARPFMPNKFPFIPVYDLAG 77
GG + LK +V + PK+GE+ +K +A +N +D F+KGV + P PF P + G
Sbjct: 93 GGPEVLKWEDVEVGEPKEGEIRVKNKAIGLNFIDVYFRKGV---YKPASMPFTPGMEAVG 149
Query: 78 EVVELGRGVSSFKVGDKVIAINFPGGGGLAEYAVAQASRTAPRPPEVSAAVGACLPIXXX 137
EVV +G G++ +GD V P G AE + A + P P + V A + +
Sbjct: 150 EVVAVGSGLTGRMIGDLVAYAGNP-MGAYAEEQILPADKVVPVPSSIDPIVAASIMLKGM 208
Query: 138 XXXXXXXXXGVSLXXXXXXXXXXXXNVLVTAASGGVGHFAVQLASAAGHRVTAT 191
+LV AA+GGVG Q A+A G V T
Sbjct: 209 TA---------QFLLRRCFKVEPGHTILVHAAAGGVGSLLCQWANALGATVIGT 253
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,477,971
Number of extensions: 248244
Number of successful extensions: 596
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 583
Number of HSP's successfully gapped: 7
Length of query: 340
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 241
Effective length of database: 8,392,385
Effective search space: 2022564785
Effective search space used: 2022564785
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)