BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0501100 Os09g0501100|AK063752
         (150 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G18100.1  | chr4:10035715-10036475 REVERSE LENGTH=134          220   2e-58
AT5G46430.1  | chr5:18833429-18834409 FORWARD LENGTH=134          218   1e-57

>AT4G18100.1 | chr4:10035715-10036475 REVERSE LENGTH=134
          Length = 133

 Score =  220 bits (561), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 105/133 (78%), Positives = 111/133 (83%)

Query: 18  MVVPLLTXXXXXXXXXXXXXPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 77
           M VPLLT             P SDR I +K SWRRPKGIDSRVRRKFKG TLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 78  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVV 137
           DKKTRHYLPN FKKFVVHN SELELLMMHNRTYCAEIAHNVST+KRK IVERA+QLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 138 TNKLARLRSQEDE 150
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133



>AT5G46430.1 | chr5:18833429-18834409 FORWARD LENGTH=134
          Length = 133

 Score =  218 bits (554), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 102/133 (76%), Positives = 110/133 (82%)

Query: 18  MVVPLLTXXXXXXXXXXXXXPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 77
           M VPLLT             P SDR I +K SWRRPKGIDSRVRRKFKG TLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 78  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVV 137
           DKKTRHYLPN FKKF+VHN SELELLMMHNRTYCAEIAHN+ST+KRK IVERA+QLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 138 TNKLARLRSQEDE 150
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,700,351
Number of extensions: 97670
Number of successful extensions: 222
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 222
Number of HSP's successfully gapped: 2
Length of query: 150
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 60
Effective length of database: 8,639,129
Effective search space: 518347740
Effective search space used: 518347740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 107 (45.8 bits)