BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0497700 Os09g0497700|AK101485
(446 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31340.1 | chr4:15205662-15208950 FORWARD LENGTH=438 365 e-101
AT2G24420.1 | chr2:10380147-10382624 FORWARD LENGTH=441 349 2e-96
AT4G30090.1 | chr4:14709135-14711612 REVERSE LENGTH=389 154 7e-38
>AT4G31340.1 | chr4:15205662-15208950 FORWARD LENGTH=438
Length = 437
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/398 (47%), Positives = 256/398 (64%), Gaps = 5/398 (1%)
Query: 49 QLRAKISALESSITKQTQELKSKDDGIQXXXXXXXXXXXXXATLQSEITSLETKRSLAAE 108
QL AKI ALES I ++T+E++ KD+ + A+LQ+E++SL+ K S +
Sbjct: 45 QLNAKIRALESQIDEKTREVQGKDEVVAEKEKLLKEREDKIASLQTEVSSLQKKGSSDSA 104
Query: 109 EQAGKANARAXXXXXXXXXXXXXXXAQNSKKSTVEARAGDADKKVQELNAKLEKLQKTSD 168
+Q GKA ARA +N +K + EAR +A+KK++ELN+ L+KLQKT++
Sbjct: 105 KQLGKAQARADELEKQVEVLKNFLEQKNKEKDSTEARTNEAEKKLRELNSSLDKLQKTNE 164
Query: 169 EQKRRIQKTEHALKVAEEELMRVQLETTTQLNQLKEVHGAWLPPWLVTHTARAKEMMLSH 228
EQK +I K E A+K+AEEE++R +LE TT+ +L E HG+WLPPWL H + + +H
Sbjct: 165 EQKNKIGKLERAIKIAEEEMLRTKLEATTKAKELLEAHGSWLPPWLAVHWFKFQTYTETH 224
Query: 229 WNEHGKPAVNSLLQKASEKSVQAKKWAEPHVEAAKTKWIPVIKEKWVTMKTNAEPYVQKV 288
W HGKPAV +++ K +E QA+KWAEPHVE KTK+IP IKE T+ + EP+ + +
Sbjct: 225 WEAHGKPAVETVILKVTEAKAQAEKWAEPHVENVKTKYIPAIKE---TVTIHVEPHFRTL 281
Query: 289 SAKSIELYQASKDVVLPHVVKAHKIADPYFQEAKKVSKPYIDQVAKATKPHVEKIRIYLK 348
S K+ E Y +SK V PH+V + DPY+QEAKK SKPY+DQVA TKPHV+K+++ +K
Sbjct: 282 SIKAKEAYHSSKSAVSPHIVTVQEFVDPYYQEAKKFSKPYVDQVATTTKPHVDKMKVAMK 341
Query: 349 PYTKRAVHIYGNFLEKATAYHQQAQATVLDYLHQHELTKEFATEELAWYLASALLIMPIY 408
PYT + + +Y FLE AT YH Q QA V L HELT+ FAT E W+ ASALL+ PI+
Sbjct: 342 PYTTKVIIVYTEFLESATTYHNQVQAHVERKLKSHELTEPFATNEFVWFAASALLVFPIF 401
Query: 409 VFYNVLVETFCSKKKKKATRNVNANHGHRKHKRRHADK 446
V Y VL FC+K KK +HG RK KR H DK
Sbjct: 402 VAYRVLSSLFCTKTKKPVKH--PHHHGRRKAKRAHTDK 437
>AT2G24420.1 | chr2:10380147-10382624 FORWARD LENGTH=441
Length = 440
Score = 349 bits (895), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/398 (45%), Positives = 252/398 (63%), Gaps = 5/398 (1%)
Query: 49 QLRAKISALESSITKQTQELKSKDDGIQXXXXXXXXXXXXXATLQSEITSLETKRSLAAE 108
QL AKI ALES I +T+ELK +++ + A+L++E++SL K S +
Sbjct: 48 QLNAKIRALESQIDDKTKELKGREELVTEKEKLLQERQDKVASLETEVSSLRKKGSSDSV 107
Query: 109 EQAGKANARAXXXXXXXXXXXXXXXAQNSKKSTVEARAGDADKKVQELNAKLEKLQKTSD 168
E KA ARA +N +K +EA+ + +KK+ ELN+++EKL KT++
Sbjct: 108 ELLSKAQARATELEKQVEVLKKFLEQKNKEKELIEAQTSETEKKLNELNSRVEKLHKTNE 167
Query: 169 EQKRRIQKTEHALKVAEEELMRVQLETTTQLNQLKEVHGAWLPPWLVTHTARAKEMMLSH 228
EQK +I+K E ALK++EEE++R + E TT+ +L EVHGAWLPPW H + + + +H
Sbjct: 168 EQKNKIRKLERALKISEEEMLRTKHEATTKAKELMEVHGAWLPPWFAVHWSSFQTVAGTH 227
Query: 229 WNEHGKPAVNSLLQKASEKSVQAKKWAEPHVEAAKTKWIPVIKEKWVTMKTNAEPYVQKV 288
W+ HGKP + + QK + QA+KWA+PH+ KTK+IP IKE T+KT+ EP+VQ +
Sbjct: 228 WDAHGKPVMEKVTQKVTLAKNQAEKWAKPHMANVKTKYIPAIKE---TVKTHVEPHVQTL 284
Query: 289 SAKSIELYQASKDVVLPHVVKAHKIADPYFQEAKKVSKPYIDQVAKATKPHVEKIRIYLK 348
S K+ E Y ASK V PH+VK + DPY+QEAKK SKPY+DQVA ATKPHV+K+R +K
Sbjct: 285 STKAKEAYHASKSAVTPHIVKFQEHVDPYYQEAKKFSKPYVDQVATATKPHVDKVRATMK 344
Query: 349 PYTKRAVHIYGNFLEKATAYHQQAQATVLDYLHQHELTKEFATEELAWYLASALLIMPIY 408
PYT + VH Y FLE A+ YH Q QA V L HEL + FAT+E W+ ASALL +PI+
Sbjct: 345 PYTTKTVHYYKEFLESASTYHHQLQANVESKLKSHELLEPFATKEFIWFAASALLALPIF 404
Query: 409 VFYNVLVETFCSKKKKKATRNVNANHGHRKHKRRHADK 446
+ Y L FC+K KK + + H RK +R H+DK
Sbjct: 405 IVYKFLCSLFCTKTKKPIRQ--SHQHTRRKARRGHSDK 440
>AT4G30090.1 | chr4:14709135-14711612 REVERSE LENGTH=389
Length = 388
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 163/298 (54%), Gaps = 14/298 (4%)
Query: 146 AGDADKKVQELNAKLEKLQKTSDEQKRRIQKTEHALKVAEEELMRVQLETTTQLNQLKEV 205
A + ++KV EL ++ L++ + Q++R + E ++A++++ ++ ++L+ +
Sbjct: 102 ASEVEEKVYELQKQVFGLKREVETQRKR--RLEVEAELADKKVAQLS-------SKLENI 152
Query: 206 HGAWLPPWLVTHTARAKEMMLSHWNEHGKPAVNSLLQKASEKSVQAKKWAEPHVEAAKTK 265
G W L + ++ +++ W++H P +++ LQ S K Q +KW+EPH+E ++
Sbjct: 153 DG-WFLSKLGLNPTESQAYLMTLWHQHLSPTLHTTLQMVSMKIEQVQKWSEPHIETLNSQ 211
Query: 266 WIPVIKEKWVTMKTNAEPYVQKVSAKSIELYQASKDVVLPHVVKAHKIADPYFQEAKKVS 325
WIP IK+ VT+ EP VQ ++ KSIEL SK + PH+++ + Y + + +
Sbjct: 212 WIPSIKDACVTITIYLEPKVQYITDKSIELLYTSKQALTPHLIQGFDASYYYLEVIRTHT 271
Query: 326 KPYIDQVAKATKPHVEKIRIYLKPYTKRAVHIYGNFLEKATAYHQQAQATVLDYLHQHEL 385
PY ++ TKPH+E++++ L+PYT+ H + + YHQQAQ + L +E+
Sbjct: 272 HPYTTRIMTLTKPHLERVQVALEPYTENVRHGFQKLVNSTKIYHQQAQ----EMLKNNEI 327
Query: 386 TKEFATEELAWYLASALLIMPIYVFYNVLVETFCSKKKKKATRNVNANHGHRKHKRRH 443
TK AT +LAW A+AL+ P+ +L K KK+ G+R+ KRRH
Sbjct: 328 TKPVATMDLAWVGATALIGFPLIFIIKLLSAVSNPKGKKRHNHKKEPTTGYRRAKRRH 385
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.124 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,123,010
Number of extensions: 253637
Number of successful extensions: 1379
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1352
Number of HSP's successfully gapped: 3
Length of query: 446
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 344
Effective length of database: 8,310,137
Effective search space: 2858687128
Effective search space used: 2858687128
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 113 (48.1 bits)