BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0492700 Os09g0492700|AK101104
(576 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76490.1 | chr1:28695801-28698206 FORWARD LENGTH=643 671 0.0
AT2G17370.1 | chr2:7550007-7551981 FORWARD LENGTH=563 582 e-166
>AT1G76490.1 | chr1:28695801-28698206 FORWARD LENGTH=643
Length = 642
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/535 (63%), Positives = 384/535 (71%), Gaps = 1/535 (0%)
Query: 38 DALPLPIRHTNLIXXXXXXXXXXYLMRRWREKIRTSTPLHVVGLAEILAICGLVASLIYL 97
DALPLP+ TN + YL+ RWR+KIR +TPLHVV + E+ AI L+AS IYL
Sbjct: 99 DALPLPLYLTNAVFFTLFFSVAYYLLHRWRDKIRYNTPLHVVTITELGAIIALIASFIYL 158
Query: 98 LSFFGIAFVQSVVSNSXXXXXXXXFLIDSRXXXXXXXXXXXXXXXXXFSLLGSACAAPKK 157
L FFGI FVQS +S + ID L +
Sbjct: 159 LGFFGIDFVQSFISRASGDAWDLADTIDDDDHRLVTCSPPTPIVSVA-KLPNPEPIVTES 217
Query: 158 MPXXXXXXXXXXXXGKIPSYVLETRLGDCRRAAGIRREALRRTTGREIRGLPLDGFDYAS 217
+P G IPSY LE+RLGDC+RAA IRREAL+R TGR I GLPLDGFDY S
Sbjct: 218 LPEEDEEIVKSVIDGVIPSYSLESRLGDCKRAASIRREALQRVTGRSIEGLPLDGFDYES 277
Query: 218 ILGQCCELPVGYVQLPVGVAGPLVLDGERFYVPMATTEGCLVASTNRGCKAIAESGGATS 277
ILGQCCE+PVGY+Q+PVG+AGPL+LDG + VPMATTEGCLVASTNRGCKA+ SGGATS
Sbjct: 278 ILGQCCEMPVGYIQIPVGIAGPLLLDGYEYSVPMATTEGCLVASTNRGCKAMFISGGATS 337
Query: 278 VVLQDGMTRAPVARFPSARRAAELKGFLENPANFDTLAMVFNRSSRFARLQRVKCAVAGR 337
VL+DGMTRAPV RF SARRA+ELK FLENP NFDTLA+VFNRSSRFARLQ VKC +AG+
Sbjct: 338 TVLKDGMTRAPVVRFASARRASELKFFLENPENFDTLAVVFNRSSRFARLQSVKCTIAGK 397
Query: 338 NLYMRFSCSTGDAMGMNMVSKGVQNVLDYLQDDFPDMDVISISGNFCSDKKSAAVNWIEG 397
N Y+RF CSTGDAMGMNMVSKGVQNVL+YL DDFPDMDVI ISGNFCSDKK AAVNWIEG
Sbjct: 398 NAYVRFCCSTGDAMGMNMVSKGVQNVLEYLTDDFPDMDVIGISGNFCSDKKPAAVNWIEG 457
Query: 398 RGKSXXXXXXXXXXXXXXXXXXXXQSLVELNVIKNXXXXXXXXXXXXFNAHASNIVTAIF 457
RGKS +LVELN++KN FNAHASNIV+A+F
Sbjct: 458 RGKSVVCEAVIRGEIVNKVLKTSVAALVELNMLKNLAGSAVAGSLGGFNAHASNIVSAVF 517
Query: 458 IATGQDPAQNVESSQCITMLEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLDLLG 517
IATGQDPAQNVESSQCITM+EA+NDGKD+HISVTMPSIEVGTVGGGTQLASQSACL+LLG
Sbjct: 518 IATGQDPAQNVESSQCITMMEAINDGKDIHISVTMPSIEVGTVGGGTQLASQSACLNLLG 577
Query: 518 VKGANRESPGSNARXXXXXXXXXXXXXELSLISAQAAGHLVQSHMKYNRSSKDMS 572
VKGA+ ESPG NAR ELSL+SA AAG LV+SHMKYNRSS+D+S
Sbjct: 578 VKGASTESPGMNARRLATIVAGAVLAGELSLMSAIAAGQLVRSHMKYNRSSRDIS 632
>AT2G17370.1 | chr2:7550007-7551981 FORWARD LENGTH=563
Length = 562
Score = 582 bits (1501), Expect = e-166, Method: Compositional matrix adjust.
Identities = 296/537 (55%), Positives = 364/537 (67%), Gaps = 16/537 (2%)
Query: 38 DALPLPIRHTNLIXXXXXXXXXXYLMRRWREKIRTSTPLHVVGLAEILAICGLVASLIYL 97
DALPLP+ TN +L+ RWREKIR STPLHVV L+EI C L+ +
Sbjct: 31 DALPLPLYLTNTFFLSLFFATVYFLLSRWREKIRNSTPLHVVDLSEI---CALIGFVASF 87
Query: 98 LSFFGIAFVQSVVSNSXXXXXXXXFLIDSRXXXXXXXXXXXXXXXXXFSLLGSACAAPKK 157
+ G + + +S D + ++ P++
Sbjct: 88 IYLLGFCGIDLIFRSSSDD--------DVWVNDGMIPCNQSLDCREVLPIKPNSVDPPRE 139
Query: 158 MPXXXXXXXXXXXX---GKIPSYVLETRLGDCRRAAGIRREALRRTTGREIRGLPLDGFD 214
G IPSY LET+LGDC+RAA IRREA++R TG+ + GLPL+GFD
Sbjct: 140 SELDSVEDEEIVKLVIDGTIPSYSLETKLGDCKRAAAIRREAVQRITGKSLTGLPLEGFD 199
Query: 215 YASILGQCCELPVGYVQLPVGVAGPLVLDGERFYVPMATTEGCLVASTNRGCKAIAESGG 274
Y SILGQCCE+PVGYVQ+PVG+AGPL+LDG + VPMATTEGCLVASTNRG KAI SGG
Sbjct: 200 YNSILGQCCEMPVGYVQIPVGIAGPLLLDGVEYSVPMATTEGCLVASTNRGFKAIHLSGG 259
Query: 275 ATSVVLQDGMTRAPVARFPSARRAAELKGFLENPANFDTLAMVFNRSSRFARLQRVKCAV 334
A SV+++D MTRAPV RFPSARRAA + +L++P+NF+ L+++FN+SSRFARLQ + C +
Sbjct: 260 AFSVLVKDAMTRAPVVRFPSARRAALVMFYLQDPSNFERLSLIFNKSSRFARLQSITCTI 319
Query: 335 AGRNLYMRFSCSTGDAMGMNMVSKGVQNVLDYLQDDFPDMDVISISGNFCSDKKSAAVNW 394
AGRNLY RF+CSTGDAMGMNMVSKGVQNVLD+++ +FPDMDVI ISGN+CSDKK++AVNW
Sbjct: 320 AGRNLYPRFACSTGDAMGMNMVSKGVQNVLDFVKSEFPDMDVIGISGNYCSDKKASAVNW 379
Query: 395 IEGRGKSXXXXXXXXXXXXXXXXXXXXQSLVELNVIKNXXXXXXXXXXXXFNAHASNIVT 454
IEGRGK ++LVELN +KN FNAH+SNIV+
Sbjct: 380 IEGRGKHVVCEAFIKAEIVEKVLKTSVEALVELNTLKNLVGSAMAGSLGGFNAHSSNIVS 439
Query: 455 AIFIATGQDPAQNVESSQCITMLEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLD 514
A+FIATGQDPAQNVESS C+TM+ + DG DLHISV+MP IEVGTVGGGTQLASQ+ACL+
Sbjct: 440 AVFIATGQDPAQNVESSHCMTMI--LPDGDDLHISVSMPCIEVGTVGGGTQLASQAACLN 497
Query: 515 LLGVKGANRESPGSNARXXXXXXXXXXXXXELSLISAQAAGHLVQSHMKYNRSSKDM 571
LLGVKG+N E PGSNA+ ELSL+SA AAG LV+SHMKYNRSS+D+
Sbjct: 498 LLGVKGSNNEKPGSNAQQLARIVAGSVLAGELSLMSAIAAGQLVKSHMKYNRSSRDI 554
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,746,718
Number of extensions: 302725
Number of successful extensions: 572
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 569
Number of HSP's successfully gapped: 4
Length of query: 576
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 472
Effective length of database: 8,255,305
Effective search space: 3896503960
Effective search space used: 3896503960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)