BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0469400 Os09g0469400|AK101554
         (377 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G09020.1  | chr4:5784099-5788839 FORWARD LENGTH=765            585   e-167
AT2G39930.1  | chr2:16666078-16672183 FORWARD LENGTH=784          318   3e-87
AT1G03310.2  | chr1:813975-816623 FORWARD LENGTH=883              204   5e-53

>AT4G09020.1 | chr4:5784099-5788839 FORWARD LENGTH=765
          Length = 764

 Score =  585 bits (1507), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 273/370 (73%), Positives = 307/370 (82%)

Query: 7   GNTLNCNHPVVKELILDSLRHWVEEYHIDGFRFDLASVLCRGPDGCPLDAPPLIKEIAKD 66
           GNTLNCNHPVV ELILDSLRHWV EYH+DGFRFDLASVLCR  DG PL APPLI+ IAKD
Sbjct: 395 GNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRATDGSPLSAPPLIRAIAKD 454

Query: 67  AVLSRCKIIAEPWDCGGLYLVGRFPNWDRWAEWNGKYRDDLRRFIKGDPGMKGVFATRVS 126
           +VLSRCKIIAEPWDCGGLYLVG+FPNWDRWAEWNG YRDD+RRFIKGD GMKG FATRVS
Sbjct: 455 SVLSRCKIIAEPWDCGGLYLVGKFPNWDRWAEWNGMYRDDVRRFIKGDSGMKGSFATRVS 514

Query: 127 GSADLYQVNERKPYHGVNFVIAHDGFTLCDLVSYNLKHXXXXXXXXXXXXXXXFSWNCGV 186
           GS+DLYQVN+RKPYHGVNFVIAHDGFTL DLVSYN KH                SWNCG 
Sbjct: 515 GSSDLYQVNQRKPYHGVNFVIAHDGFTLRDLVSYNFKHNEANGEGGNDGCNDNHSWNCGF 574

Query: 187 EGETNDLNVLSLRSRQMKNFHVALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTCINNFQ 246
           EGET D ++ SLR+RQMKNFH+ALMISQGTPMMLMGDEYGHTRYGNNNSYGHDT +NNFQ
Sbjct: 575 EGETGDAHIKSLRTRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSLNNFQ 634

Query: 247 WEQLEQRRDGHFRFFSEMIKFRHSNPILRRDRFLNKNDVTWHEDCWENQESKFLAFTVHD 306
           W++L+ ++  HFRFFSE+IKFRHS+ +L+ + FL + ++TWHED W+N ESKFLAFT+HD
Sbjct: 635 WKELDAKKQNHFRFFSEVIKFRHSHHVLKHENFLTQGEITWHEDNWDNSESKFLAFTLHD 694

Query: 307 HNSGGDIYLAFNAHDYFVDAVIPPPPHHKCWNRVVDTNLESPNDIVPEGVPFTGPKYRIA 366
              G DIY+AFNAHDYFV A+IP PP  K W RV DTNLESP+D V EGV      Y +A
Sbjct: 695 GIGGRDIYVAFNAHDYFVKALIPQPPPGKQWFRVADTNLESPDDFVREGVAGVADTYNVA 754

Query: 367 PYSSILLKAK 376
           P+SSILL++K
Sbjct: 755 PFSSILLQSK 764



>AT2G39930.1 | chr2:16666078-16672183 FORWARD LENGTH=784
          Length = 783

 Score =  318 bits (815), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 175/406 (43%), Positives = 233/406 (57%), Gaps = 38/406 (9%)

Query: 7   GNTLNCNHPVVKELILDSLRHWVEEYHIDGFRFDLASVLCR-----------GPD----- 50
           GNT NCNHPVV++ ILD LR+WV E H+DGFRFDL S++ R           G D     
Sbjct: 377 GNTFNCNHPVVRQFILDCLRYWVTEMHVDGFRFDLGSIMSRSSSLWDAANVYGADVEGDL 436

Query: 51  ---GCPLDAPPLIKEIAKDAVLSRCKIIAEPWDCGGLYLVGRFPNWDRWAEWNGKYRDDL 107
              G P+  PP+I  I+ D +L   K+IAE WD GGLY VG FP+W  W+EWNGK+RD +
Sbjct: 437 LTTGTPISCPPVIDMISNDPILRGVKLIAEAWDAGGLYQVGMFPHWGIWSEWNGKFRDVV 496

Query: 108 RRFIKGDPGMKGVFATRVSGSADLYQVNERKPYHGVNFVIAHDGFTLCDLVSYNLKHXXX 167
           R+FIKG  G  G FA  + GS +LYQ   RKP+H +NF+ AHDGFTL DLV+YN K+   
Sbjct: 497 RQFIKGTDGFSGAFAECLCGSPNLYQ-GGRKPWHSINFICAHDGFTLADLVTYNNKNNLA 555

Query: 168 XXXXXXXXXXXXFSWNCGVEGETNDLNVLSLRSRQMKNFHVALMISQGTPMMLMGDEYGH 227
                       +SWNCG EG+   ++V  LR RQM+NF V+LM+SQG PM+ MGDEYGH
Sbjct: 556 NGEENNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGH 615

Query: 228 TRYGNNNSYGHDTCINNFQWEQLEQRRDGHFRFFSEMIKFRHSNPILRRDRFLNKNDVTW 287
           T+ GNNN+Y HD  +N F+W++ E+     FRF   +IKFR     L  + F     + W
Sbjct: 616 TKGGNNNTYCHDNYMNYFRWDKKEEAHSDFFRFCRILIKFRDECESLGLNDFPTAKRLQW 675

Query: 288 HEDCWE----NQESKFLAFTVHDHNSGGDIYLAFNAHDYFVDAVIPPPPHHKCWNRVVDT 343
           H    E    ++ S+F+AF++ D +   +IY+AFN         +P  P ++ W   VDT
Sbjct: 676 HGLAPEIPNWSETSRFVAFSLVD-SVKKEIYVAFNTSHLATLVSLPNRPGYR-WEPFVDT 733

Query: 344 NLESPNDIVPEGVP------------FTGPKYRIAPYSSILLKAKP 377
           +  SP D +   +P                 Y +  YSSI+L   P
Sbjct: 734 SKPSPYDCITPDLPERETAMKQYRHFLDANVYPMLSYSSIILLLSP 779



>AT1G03310.2 | chr1:813975-816623 FORWARD LENGTH=883
          Length = 882

 Score =  204 bits (520), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/396 (33%), Positives = 194/396 (48%), Gaps = 48/396 (12%)

Query: 10  LNCNHPVVKELILDSLRHWVEEYHIDGFRFDLASVLCRGPDGCPLDAPPLIKEIAKDAVL 69
           LNCN+PVV++L+L+SLR+WV E+H+DGF F  AS L RG  G  L  PPL++ IA D +L
Sbjct: 500 LNCNYPVVQQLVLESLRYWVTEFHVDGFCFINASSLLRGVHGEQLSRPPLVEAIAFDPLL 559

Query: 70  SRCKIIAEPWD-CGGLYLVGRFPNWDRWAEWNGKYRDDLRRFIKGDPGMKGVFATRVSGS 128
           +  K+IA+ WD    +    RFP+W RWAE N +Y  ++R F++G  G+    ATR+ GS
Sbjct: 560 AETKLIADCWDPLEMMPKEVRFPHWKRWAELNTRYCRNVRNFLRGR-GVLSDLATRICGS 618

Query: 129 ADLYQVNERKPYHGVNFVIAHDGFTLCDLVSYNLKHXXXXXXXXXXXXXXXFSWNCGVEG 188
            D++  + R P    N++  + G +L D+VS++                   SWNCG EG
Sbjct: 619 GDVF-TDGRGPAFSFNYISRNSGLSLVDIVSFS-----------GPELASELSWNCGEEG 666

Query: 189 ETNDLNVLSLRSRQMKNFHVALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTCINNFQWE 248
            TN   VL  R +Q++NF     IS G P++ MGDE G +  G+            F W 
Sbjct: 667 ATNKSAVLQRRLKQIRNFLFIQYISLGVPVLNMGDECGISTRGSPLLESR----KPFDWN 722

Query: 249 QLEQ---RRDGHFRFFSEMIKFRHSNPILRRDRFLNKNDVTWHED-----CWENQESKFL 300
            L      +   F  F   ++ R S+   RRD FL   ++ W+ +      WE+  SKFL
Sbjct: 723 LLASAFGTQITQFISFMTSVRARRSDVFQRRD-FLKPENIVWYANDQTTPKWEDPASKFL 781

Query: 301 AFTVH--------------DHNSGGDIYLAFNAHDYFVDAVIPPPPHHKCWNRVVDTNLE 346
           A  +               +     D+++ FNA D+    V+P  P    W R+VDT L 
Sbjct: 782 ALEIKSESEEEETASLAEPNEPKSNDLFIGFNASDHPESVVLPSLPDGSKWRRLVDTALP 841

Query: 347 SPNDIVPEGVPFTGPK-------YRIAPYSSILLKA 375
            P     EG      +       Y + PYS  L + 
Sbjct: 842 FPGFFSVEGETVVAEEPLQQLVVYEMKPYSCTLFET 877



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.323    0.141    0.475 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,437,029
Number of extensions: 425321
Number of successful extensions: 749
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 741
Number of HSP's successfully gapped: 3
Length of query: 377
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 277
Effective length of database: 8,364,969
Effective search space: 2317096413
Effective search space used: 2317096413
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)