BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0457800 Os09g0457800|AK101358
(437 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25000.1 | chr4:12852109-12853825 REVERSE LENGTH=424 516 e-146
AT1G69830.1 | chr1:26288518-26293003 REVERSE LENGTH=888 372 e-103
AT1G76130.1 | chr1:28561647-28563914 FORWARD LENGTH=414 345 2e-95
>AT4G25000.1 | chr4:12852109-12853825 REVERSE LENGTH=424
Length = 423
Score = 516 bits (1328), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/424 (57%), Positives = 312/424 (73%), Gaps = 7/424 (1%)
Query: 4 HSTTMSCLLFFVLLCLGSHLAQAQVLFQGFNWESWKKQGGWYNFLHSHVDDIAATGVTHV 63
H+ S LLFF++ + + +LFQ FNWESWKK+GG+YN LH+ +DDIA G+TH+
Sbjct: 5 HTLLFSSLLFFIVFP--TFTFSSTLLFQSFNWESWKKEGGFYNSLHNSIDDIANAGITHL 62
Query: 64 WLPPPSHSVAPQGYMPGRLYDLDASKYGTGAELRSLIAAFHSKSIKCVADIVINHRCADY 123
WLPPPS SVAP+GY+PG+LYDL++SKYG+ AEL+SLI A + K IK +ADIVINHR A+
Sbjct: 63 WLPPPSQSVAPEGYLPGKLYDLNSSKYGSEAELKSLIKALNQKGIKALADIVINHRTAER 122
Query: 124 KDSRGIYCIFEGGTPDSRLDWGPDMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNTRVQ 183
KD + YC FEGGT D RLDW P +C +D ++ G G+ DTG DF APDIDHLN RVQ
Sbjct: 123 KDDKCGYCYFEGGTSDDRLDWDPSFVCRNDPKFP-GTGNLDTGGDFDGAPDIDHLNPRVQ 181
Query: 184 TELSDWLNWLKSDVGFDGWRLDFAKGYSATVAKTYVDNTDPSFVVAEIWSNMRYDGNGEP 243
ELS+W+NWLK+++GF GWR D+ +GY++++ K YV NT P F V E W +M+Y G+G+
Sbjct: 182 KELSEWMNWLKTEIGFHGWRFDYVRGYASSITKLYVQNTSPDFAVGEKWDDMKYGGDGKL 241
Query: 244 SWNQDGDRQELVNW-AQAVGGPASAFDFTTKGELQAAVQGELWRMKDGNGKAPGMIGWLP 302
++Q+ R L W +A GG +AFDFTTKG LQ+AV+GELWR+KD GK PGMIG +P
Sbjct: 242 DYDQNEHRSGLKQWIEEAGGGVLTAFDFTTKGILQSAVKGELWRLKDSQGKPPGMIGIMP 301
Query: 303 EKAVTFIDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNLKQEISTLA 362
AVTFIDNHDT T W FPSDKV+ GY YILTHPG PCIFY+H +W LK+ IS L
Sbjct: 302 GNAVTFIDNHDTFRT---WVFPSDKVLLGYVYILTHPGTPCIFYNHYIEWGLKESISKLV 358
Query: 363 AVRSRNGIHPGSKLNILAADGDVYVAMIDDKVITKIGTRYDVGNLIPSDFHVVAHGNNYC 422
A+R++NGI S + I AA+ D+Y+AMIDDKVI KIG + DVG L+PS+F + G ++
Sbjct: 359 AIRNKNGIGSTSSVTIKAAEADLYLAMIDDKVIMKIGPKQDVGTLVPSNFALAYSGLDFA 418
Query: 423 VWEK 426
VWEK
Sbjct: 419 VWEK 422
>AT1G69830.1 | chr1:26288518-26293003 REVERSE LENGTH=888
Length = 887
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/402 (46%), Positives = 257/402 (63%), Gaps = 11/402 (2%)
Query: 27 QVLFQGFNWESWKKQGGWYNFLHSHVDDIAATGVTHVWLPPPSHSVAPQGYMPGRLYDLD 86
++L QGFNWES K G WY L D++A+ G T +WLPPP+ SV+P+GYMP LY+L+
Sbjct: 496 EILCQGFNWES-NKSGRWYLELQEKADELASLGFTVLWLPPPTESVSPEGYMPKDLYNLN 554
Query: 87 ASKYGTGAELRSLIAAFHSKSIKCVADIVINHRCADYKDSRGIYCIFEGGTPDSRLDWGP 146
S+YGT EL+ + FH IK + D V+NHRCA +K+ G++ +F G RL+W
Sbjct: 555 -SRYGTIDELKDTVKKFHKVGIKVLGDAVLNHRCAHFKNQNGVWNLFGG-----RLNWDD 608
Query: 147 DMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNTRVQTELSDWLNWLKSDVGFDGWRLDF 206
+ +DD + GRG++ +G +F AAP+IDH V+ ++ +WL W+ +VG+DGWRLDF
Sbjct: 609 RAVVADDPHF-QGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWMMEEVGYDGWRLDF 667
Query: 207 AKGYSATVAKTYVDNTDPSFVVAEIWSNMRYDGNGEPSWNQDGDRQELVNWAQAVGGPAS 266
+G+ K Y+D + P F V E W ++ Y GE +NQD RQ +V+W A G A
Sbjct: 668 VRGFWGGYVKDYMDASKPYFAVGEYWDSLSYT-YGEMDYNQDAHRQRIVDWINATSGAAG 726
Query: 267 AFDFTTKGELQAAVQG-ELWRMKDGNGKAPGMIGWLPEKAVTFIDNHDTGSTQNSWPFPS 325
AFD TTKG L A+Q E WR+ D GK PG++GW P +AVTFI+NHDTGSTQ W FP
Sbjct: 727 AFDVTTKGILHTALQKCEYWRLSDPKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPE 786
Query: 326 DKVMQGYAYILTHPGVPCIFYDHVFDWNLKQEISTLAAVRSRNGIHPGSKLNILAADGDV 385
K MQGYAYILTHPG P +F+DH+F + EI+ L ++R+R +H S++NI ++ DV
Sbjct: 787 GKEMQGYAYILTHPGTPAVFFDHIFS-DYHSEIAALLSLRNRQKLHCRSEVNIDKSERDV 845
Query: 386 YVAMIDDKVITKIGTRYDVGNLIPSDFHVVAHGNNYCVWEKS 427
Y A+ID+KV KIG + ++ V G +Y VWE S
Sbjct: 846 YAAIIDEKVAMKIGPGHYEPPNGSQNWSVAVEGRDYKVWETS 887
>AT1G76130.1 | chr1:28561647-28563914 FORWARD LENGTH=414
Length = 413
Score = 345 bits (886), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/404 (43%), Positives = 249/404 (61%), Gaps = 20/404 (4%)
Query: 27 QVLFQGFNWESWKKQGGWYNFLHSHVDDIAATGVTHVWLPPPSHSVAPQGYMPGRLYDLD 86
+V+ Q +NWES K W+ L V DIA +G T WLPPPS S+AP+GY+P LY L+
Sbjct: 26 EVILQAYNWESHKYD--WWRNLDGKVPDIAKSGFTSAWLPPPSQSLAPEGYLPQDLYSLN 83
Query: 87 ASKYGTGAELRSLIAAFHSKSIKCVADIVINHRCADYKDSRGIYCIFEGGTPDSRLDWGP 146
S YG+ L+SL+ ++ +ADIVINHR + G+Y ++G + L W
Sbjct: 84 -SAYGSEHLLKSLLRKMKQYKVRAMADIVINHRVGTTRGHGGMYNRYDGIS----LPWDE 138
Query: 147 DMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNTRVQTELSDWLNWLKSDVGFDGWRLDF 206
+ T + G G+R TG +F P++DH V+ ++ WL WL++ VGF +R DF
Sbjct: 139 HAV----TSCTGGLGNRSTGDNFNGVPNVDHTQHFVRKDIIGWLRWLRNTVGFQDFRFDF 194
Query: 207 AKGYSATVAKTYVDNTDPSFVVAEIWSNMRYDGNGEPSWNQDGDRQELVNWAQAVGGPAS 266
A+GYSA K Y+ P F V E W + Y+G+G +NQD RQ +++W A G ++
Sbjct: 195 ARGYSANYVKEYIGAAKPLFSVGECWDSCNYNGHGL-DYNQDSHRQRIISWIDATGQISA 253
Query: 267 AFDFTTKGELQAAVQGELWRMKDGNGKAPGMIGWLPEKAVTFIDNHDTGSTQNSWPFPSD 326
AFDFTTKG LQ AV+G+ WR+ D GK PG++GW P +AVTF+DNHDTGSTQ WPFPS
Sbjct: 254 AFDFTTKGILQEAVKGQYWRLCDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSH 313
Query: 327 KVMQGYAYILTHPGVPCIFYDHVFDW--NLKQEISTLAAVRSRNGIHPGSKLNILAADGD 384
VM+GYAYILTHPG+PC+FYDH +DW ++ +I L +R R IH S + +L A+ +
Sbjct: 314 HVMEGYAYILTHPGIPCVFYDHFYDWGSSIHDQIVKLIDIRRRQDIHSRSTVRVLKAESN 373
Query: 385 VYVAMIDDKVITKIGTRYDVGNLIPS--DFHVVAHGNNYCVWEK 426
+Y A++ +K+ K+G G+ PS D+ + G+ Y VW K
Sbjct: 374 LYAAIVGEKICMKLGD----GSWCPSGRDWTLATSGHRYAVWHK 413
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.137 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,186,815
Number of extensions: 508307
Number of successful extensions: 1040
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1027
Number of HSP's successfully gapped: 3
Length of query: 437
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 335
Effective length of database: 8,310,137
Effective search space: 2783895895
Effective search space used: 2783895895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)