BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0450600 Os09g0450600|Os09g0450600
(98 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50720.1 | chr5:20633442-20634502 REVERSE LENGTH=117 112 3e-26
AT4G24960.1 | chr4:12828060-12828982 FORWARD LENGTH=136 110 2e-25
AT2G42820.1 | chr2:17817460-17818301 REVERSE LENGTH=159 87 1e-18
AT1G74520.1 | chr1:28008109-28009156 REVERSE LENGTH=178 81 1e-16
AT1G69700.1 | chr1:26220337-26221663 FORWARD LENGTH=185 78 1e-15
AT5G62490.1 | chr5:25090206-25091345 FORWARD LENGTH=168 76 3e-15
AT4G36720.1 | chr4:17307769-17309668 FORWARD LENGTH=201 56 5e-09
AT5G42560.1 | chr5:17015573-17016969 FORWARD LENGTH=297 55 1e-08
AT1G19950.1 | chr1:6925043-6926527 FORWARD LENGTH=316 54 1e-08
AT1G75700.1 | chr1:28423956-28424931 FORWARD LENGTH=178 50 2e-07
>AT5G50720.1 | chr5:20633442-20634502 REVERSE LENGTH=117
Length = 116
Score = 112 bits (281), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 61/72 (84%)
Query: 1 MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASF 60
+ES SKVDDEQWL YWILYS +TL E+ L +L WIP+WY AK++FVAWLVLPQFRGA+F
Sbjct: 32 IESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTAKLVFVAWLVLPQFRGAAF 91
Query: 61 IYDKFVREQLKK 72
IY+K VREQ KK
Sbjct: 92 IYNKVVREQFKK 103
>AT4G24960.1 | chr4:12828060-12828982 FORWARD LENGTH=136
Length = 135
Score = 110 bits (274), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 63/75 (84%)
Query: 1 MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASF 60
MEST+KVDDEQWL YWI+YS ++L E+ L ++ WIP+WY K++FVAWLVLPQF+GA+F
Sbjct: 32 MESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVKLVFVAWLVLPQFQGAAF 91
Query: 61 IYDKFVREQLKKNRV 75
IY++ VREQ KK+ V
Sbjct: 92 IYNRVVREQFKKHGV 106
>AT2G42820.1 | chr2:17817460-17818301 REVERSE LENGTH=159
Length = 158
Score = 87.4 bits (215), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%)
Query: 1 MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASF 60
+ES + +DD+QWL YWI+YSLIT+ E+++ +VL W+P W K+LF WLVLP F GA++
Sbjct: 32 IESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAWLPFWPYLKLLFCMWLVLPMFSGAAY 91
Query: 61 IYDKFVREQLK 71
IY FVR+ +K
Sbjct: 92 IYSNFVRQYVK 102
>AT1G74520.1 | chr1:28008109-28009156 REVERSE LENGTH=178
Length = 177
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 51/74 (68%)
Query: 1 MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASF 60
+E+ S DD+QWL YW+LYSL+TL+E+ K++ W+P+W K++ WLV+P F GA++
Sbjct: 37 IETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAY 96
Query: 61 IYDKFVREQLKKNR 74
+Y+ FVR R
Sbjct: 97 VYEHFVRPVFVNPR 110
>AT1G69700.1 | chr1:26220337-26221663 FORWARD LENGTH=185
Length = 184
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%)
Query: 1 MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASF 60
+E+ S +DEQWL YW+LY+LI+L E+ K L W P+W K+ + WLVLPQF GA
Sbjct: 39 IETRSLPEDEQWLTYWVLYALISLFELTFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEH 98
Query: 61 IYDKFVR 67
IY F+R
Sbjct: 99 IYKHFIR 105
>AT5G62490.1 | chr5:25090206-25091345 FORWARD LENGTH=168
Length = 167
Score = 76.3 bits (186), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 1 MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASF 60
+ES S DD+QWL YW LYSLI L E+ ++L WIPL+ AK+ +WLVLP GA++
Sbjct: 37 IESRSHGDDKQWLTYWALYSLIKLFELTFFRLLEWIPLYPYAKLALTSWLVLPGMNGAAY 96
Query: 61 IYDKFVREQL 70
+Y+ +VR L
Sbjct: 97 LYEHYVRSFL 106
>AT4G36720.1 | chr4:17307769-17309668 FORWARD LENGTH=201
Length = 200
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 1 MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASF 60
+ES + + ++ L+YW Y +L+E+ K++ W PL+Y K F+ WL LP G+
Sbjct: 57 IESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFAFLVWLQLPTVEGSKQ 116
Query: 61 IYDKFVREQLKKNRVKL 77
IY+ +R L +++ ++
Sbjct: 117 IYNNQIRPFLLRHQARV 133
>AT5G42560.1 | chr5:17015573-17016969 FORWARD LENGTH=297
Length = 296
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 12 WLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASFIYDKFVREQLK 71
W YWIL + +T+ E + W+P++ EAK+ F +L P+ RG +++Y+ F R L
Sbjct: 40 WCQYWILVACLTVFERVGDAFVSWVPMYSEAKLAFFIYLWYPKTRGTTYVYESFFRPYLS 99
Query: 72 KN 73
++
Sbjct: 100 QH 101
>AT1G19950.1 | chr1:6925043-6926527 FORWARD LENGTH=316
Length = 315
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 12 WLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASFIYDKFVREQLK 71
W YWIL + +T+ E + W+PL+ EAK+ F +L P+ RG +++YD F + +
Sbjct: 40 WCQYWILVAALTIFERVGDALASWVPLYCEAKLAFFIYLWFPKTRGTTYVYDSFFQPYVA 99
Query: 72 KN 73
K+
Sbjct: 100 KH 101
>AT1G75700.1 | chr1:28423956-28424931 FORWARD LENGTH=178
Length = 177
Score = 50.1 bits (118), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 12 WLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASFIYDKFVREQLK 71
W YWI+ + +T+ E ++ W+P++ EAK+ F +L P+ +G +++YD F R +
Sbjct: 40 WCQYWIIVAALTIFERIGDALVSWLPMYSEAKLAFFIYLWFPKTKGTTYVYDSFFRPYIA 99
Query: 72 KN 73
K+
Sbjct: 100 KH 101
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.138 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,935,447
Number of extensions: 61959
Number of successful extensions: 154
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 154
Number of HSP's successfully gapped: 11
Length of query: 98
Length of database: 11,106,569
Length adjustment: 68
Effective length of query: 30
Effective length of database: 9,242,281
Effective search space: 277268430
Effective search space used: 277268430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 104 (44.7 bits)