BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0439800 Os09g0439800|AK068870
         (251 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G72490.1  | chr1:27289435-27290732 REVERSE LENGTH=288          118   3e-27
AT1G17400.1  | chr1:5960920-5962245 REVERSE LENGTH=296             92   2e-19
AT1G19115.3  | chr1:6606351-6607197 FORWARD LENGTH=176             58   5e-09

>AT1G72490.1 | chr1:27289435-27290732 REVERSE LENGTH=288
          Length = 287

 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 54/296 (18%)

Query: 1   MKIFSWVANKISGKQEANRFPANSSAPYRANVSDCRKDEFSDWPQSLLAIGTFGNKQI-- 58
           MK F W+ NK+ GKQE    P+ SSA      S   ++EF+DWP  LLAIGTFGNK+   
Sbjct: 1   MKFFGWMQNKLHGKQEITHRPSISSAS-----SHHPREEFNDWPHGLLAIGTFGNKKQTP 55

Query: 59  ----EEVAQVENSSD---NVQSVQDTVK-----------FTEEEVDKIRKEFETLL---A 97
               +EV Q E  S+     +  QDT +           FT EEV K++KE   LL   +
Sbjct: 56  QTLDQEVIQEETVSNLHVEGRQAQDTDQELSSSDDLEEDFTPEEVGKLQKELTKLLTRRS 115

Query: 98  IKDQAEAQRSHDD----------DQVGLQKRADG-------EDNEKHIRQLINK-RIIVX 139
            K +++  R   +            + + +R          ED E+ I  ++ + + I  
Sbjct: 116 KKRKSDVNRELANLPLDRFLNCPSSLEVDRRISNALCDEKEEDIERTISVILGRCKAIST 175

Query: 140 XXXXXXXXXXXTLKPRSVASLLK-LFMCKGGFTSVVPEP--RNTFPQSRMEKLLKAILQK 196
                       L   SV+ LLK +F+C  GF S VP P  R+TF ++RMEKLL+ +L K
Sbjct: 176 ESKNKTKKNKRDLSKTSVSHLLKKMFVCTEGF-SPVPRPILRDTFQETRMEKLLRMMLHK 234

Query: 197 KIHPQNSSTLVA-KRHLDWKPDETEINECLEDALRDLDDDGAKWVKTDSEYIVLEM 251
           K++ Q SS   + K++L  K   +  NE  E+  R   +DG KWVKTDS++IVLE+
Sbjct: 235 KVNTQASSKQTSTKKYLQDKQQLSLKNE--EEEGRS-SNDGGKWVKTDSDFIVLEI 287



>AT1G17400.1 | chr1:5960920-5962245 REVERSE LENGTH=296
          Length = 295

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 143/305 (46%), Gaps = 64/305 (20%)

Query: 1   MKIFSWVANKISGKQEANRFPANSSAPYRANVSDCRKDEFSDWPQSLLAIGTFGNKQIEE 60
           MK F W+ NK++G  + NR   ++S+    +V    ++EFSDWP +LLAIGTFG      
Sbjct: 1   MKFFGWMQNKLNG--DHNR--TSTSSASSHHVKQEPREEFSDWPHALLAIGTFGTTS--- 53

Query: 61  VAQVENSSDNVQSVQDTVK--------------------FTEEEVDKIRKEFETLLAIKD 100
            +  EN S NV    +  K                    FT EEV K++KE   LL+   
Sbjct: 54  NSVSENESKNVHEEIEAEKKCTAQSEQEEEPSSSVNLEDFTPEEVGKLQKELMKLLSRTK 113

Query: 101 QAEAQRSHD-------------------DDQV--GLQKRADG--EDNEKHIRQLINKRII 137
           + ++  + +                   D ++   L    D   E+ E+ + + IN  +I
Sbjct: 114 KRKSDVNRELMKNLPLDRFLNCPSSLEVDRRISNALSAVVDSSEENKEEDMERTIN--VI 171

Query: 138 VXXXXXXXXXXXXTLKPR-----SVASLLK-LFMCKGGFTSVVPEP--RNTFPQSRMEKL 189
           +              K R     SV+ L K +F+C  G  S  P P  R+T  +SRMEKL
Sbjct: 172 LGRCKEISIESKNNKKKRDISKNSVSYLFKKIFVCADGI-STAPSPSLRDTLQESRMEKL 230

Query: 190 LKAILQKKIHPQNSS---TLVAKRHLDWKPDETEINECLEDALRDLDDDGAKWVKTDSEY 246
           LK +L KKI+ Q SS   +L  KR+L  K   +  +E  E + R    DG KWVKTDS++
Sbjct: 231 LKMMLHKKINAQASSKPTSLTTKRYLQDKKQLSLKSEEEETSERRSSSDGYKWVKTDSDF 290

Query: 247 IVLEM 251
           IVLE+
Sbjct: 291 IVLEI 295



>AT1G19115.3 | chr1:6606351-6607197 FORWARD LENGTH=176
          Length = 175

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 14/98 (14%)

Query: 153 KPRSVASLLK-LFMCKGGFTSVVP----EPRNTFPQSRMEKLLKAILQKKIHPQNSSTLV 207
           K +S++ LLK +F+C  GF +  P       ++   +RMEK+L+ IL KKIHPQ S++ +
Sbjct: 83  KKKSLSFLLKKMFVCTSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHPQRSNS-I 141

Query: 208 AKRHLDWKPDETEINECLEDALRDLDDDGAKWVKTDSE 245
           AK++L       E N  + D  R    D  KWVKTDSE
Sbjct: 142 AKKYL-------ESNHKIMDEARS-SVDANKWVKTDSE 171



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.130    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,236,216
Number of extensions: 201959
Number of successful extensions: 723
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 716
Number of HSP's successfully gapped: 5
Length of query: 251
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 155
Effective length of database: 8,474,633
Effective search space: 1313568115
Effective search space used: 1313568115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 110 (47.0 bits)