BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0433800 Os09g0433800|AK104973
(174 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G44670.1 | chr2:18425279-18425673 FORWARD LENGTH=94 67 5e-12
AT5G47060.1 | chr5:19116843-19117639 FORWARD LENGTH=178 64 4e-11
AT1G53903.1 | chr1:20132363-20132842 FORWARD LENGTH=127 64 6e-11
AT1G53885.1 | chr1:20119798-20120277 FORWARD LENGTH=127 64 6e-11
AT1G22160.1 | chr1:7823238-7823774 FORWARD LENGTH=148 62 2e-10
AT4G17670.1 | chr4:9833948-9834663 REVERSE LENGTH=160 62 2e-10
AT1G78020.1 | chr1:29338787-29339491 FORWARD LENGTH=163 61 3e-10
AT1G19200.1 | chr1:6625104-6625856 REVERSE LENGTH=216 60 4e-10
AT1G74940.1 | chr1:28146284-28147065 FORWARD LENGTH=223 59 9e-10
AT5G65040.1 | chr5:25977864-25978350 REVERSE LENGTH=114 59 1e-09
AT3G63210.1 | chr3:23354019-23354906 REVERSE LENGTH=264 57 5e-09
AT4G39795.1 | chr4:18466621-18467325 FORWARD LENGTH=127 56 8e-09
AT5G49120.1 | chr5:19908800-19909332 REVERSE LENGTH=151 56 1e-08
AT3G22550.1 | chr3:7991827-7992805 REVERSE LENGTH=268 54 6e-08
AT5G20700.1 | chr5:7006178-7007003 REVERSE LENGTH=249 53 7e-08
AT2G25690.1 | chr2:10940530-10941649 REVERSE LENGTH=325 53 9e-08
AT5G11460.1 | chr5:3657064-3658388 REVERSE LENGTH=345 49 2e-06
>AT2G44670.1 | chr2:18425279-18425673 FORWARD LENGTH=94
Length = 93
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 95 FLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARER 139
FL +CSLCR LG + D++MYRG++ FCS ECR +QI +DEA+ER
Sbjct: 16 FLESCSLCRKHLGLNSDIFMYRGDKAFCSNECREEQIESDEAKER 60
>AT5G47060.1 | chr5:19116843-19117639 FORWARD LENGTH=178
Length = 177
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 95 FLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARER 139
FL +C LC+ LG ++D+YMYRG+ FCSEECR +QI DEA+E+
Sbjct: 97 FLDSCFLCKKPLGDNRDIYMYRGDTPFCSEECRQEQIERDEAKEK 141
>AT1G53903.1 | chr1:20132363-20132842 FORWARD LENGTH=127
Length = 126
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 95 FLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARERDAMAK 144
FL C LC +L DKDVYMYRG+ GFCS ECR Q++ D+ +E +A K
Sbjct: 42 FLKTCHLCNKQLHQDKDVYMYRGDLGFCSRECRESQMLIDDRKELEASTK 91
>AT1G53885.1 | chr1:20119798-20120277 FORWARD LENGTH=127
Length = 126
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 95 FLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARERDAMAK 144
FL C LC +L DKDVYMYRG+ GFCS ECR Q++ D+ +E +A K
Sbjct: 42 FLKTCHLCNKQLHQDKDVYMYRGDLGFCSRECRESQMLIDDRKELEASTK 91
>AT1G22160.1 | chr1:7823238-7823774 FORWARD LENGTH=148
Length = 147
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 94 DFLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARER 139
DFL +CSLC+ L +D+YMYRG++ FCS ECR QQI DE +E+
Sbjct: 77 DFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERKEK 122
>AT4G17670.1 | chr4:9833948-9834663 REVERSE LENGTH=160
Length = 159
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 95 FLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARER 139
FL +C LC+ LG ++D++MYRG+ FCSEECR +QI DEA+E+
Sbjct: 76 FLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKEK 120
>AT1G78020.1 | chr1:29338787-29339491 FORWARD LENGTH=163
Length = 162
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 92 CGDFLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARERDAMA 143
G FL +C+LC L P +D+YMYRG++ FCS ECR +Q+ DE +E+ A
Sbjct: 86 AGHFLRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQDERKEKGKSA 137
>AT1G19200.1 | chr1:6625104-6625856 REVERSE LENGTH=216
Length = 215
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 92 CGDFLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARERDAMAKKERL 148
C DFL++C LC+ +L KD+YMY+G++GFCS+ECR +IM D +E+ + E L
Sbjct: 147 CPDFLTSCCLCKKKL-QGKDIYMYKGDEGFCSKECRSLKIMEDSLKEQHKLTSVEVL 202
>AT1G74940.1 | chr1:28146284-28147065 FORWARD LENGTH=223
Length = 222
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 94 DFLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARER 139
+FLS+C LC+ +L KD+YMY+GE GFCS ECR QIM DE +E+
Sbjct: 149 EFLSSCCLCKKKLQ-GKDIYMYKGEMGFCSAECRSVQIMNDERQEQ 193
>AT5G65040.1 | chr5:25977864-25978350 REVERSE LENGTH=114
Length = 113
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 94 DFLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARERDAMAKKER 147
DFL CSLC L +D+YMYRG FCS ECR +QI DE + + ++
Sbjct: 56 DFLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKKAKTGFVTSKK 109
>AT3G63210.1 | chr3:23354019-23354906 REVERSE LENGTH=264
Length = 263
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 95 FLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDE 135
FLS C C+ L +D+Y+YRGE+GFCS ECR+Q+++ D+
Sbjct: 220 FLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEMLLDQ 260
>AT4G39795.1 | chr4:18466621-18467325 FORWARD LENGTH=127
Length = 126
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 95 FLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARERD 140
FL C C+ L P +D+YMY+G+ FCS ECR QQ+ DE + R+
Sbjct: 73 FLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQMEHDEGKTRN 118
>AT5G49120.1 | chr5:19908800-19909332 REVERSE LENGTH=151
Length = 150
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 95 FLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDE 135
FL C LCR +L P KD+YMY+G++ FCS ECR +Q++ DE
Sbjct: 68 FLEHCFLCRRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDE 108
>AT3G22550.1 | chr3:7991827-7992805 REVERSE LENGTH=268
Length = 267
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 95 FLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARE 138
FLS C C+ LGP D++MYRG++ FCS ECR ++M E +
Sbjct: 222 FLSCCCNCKKSLGPRDDIFMYRGDRAFCSSECRSIEMMMSEEND 265
>AT5G20700.1 | chr5:7006178-7007003 REVERSE LENGTH=249
Length = 248
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 95 FLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDEARER 139
FL++C LCR +L +D+++YRGE+ FCS ECR I DE +ER
Sbjct: 182 FLNSCYLCRKKLH-GQDIFIYRGEKAFCSTECRSSHIANDERKER 225
>AT2G25690.1 | chr2:10940530-10941649 REVERSE LENGTH=325
Length = 324
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 94 DFLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQIMTDE 135
+FL C+ C +LG D+YMYR E+ FCSEECR +++M DE
Sbjct: 266 NFLGICNFCNKKLGGGDDIYMYR-EKSFCSEECRSEEMMIDE 306
>AT5G11460.1 | chr5:3657064-3658388 REVERSE LENGTH=345
Length = 344
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 94 DFLSACSLCRLELGPDKDVYMYRGEQGFCSEECRWQQI 131
DFLS C C +LG +D+YMY G + FCS ECR ++I
Sbjct: 270 DFLSFCYGCSKKLGMGEDIYMYSGYKAFCSSECRSKEI 307
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.138 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,704,320
Number of extensions: 90237
Number of successful extensions: 306
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 303
Number of HSP's successfully gapped: 17
Length of query: 174
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 82
Effective length of database: 8,584,297
Effective search space: 703912354
Effective search space used: 703912354
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 108 (46.2 bits)