BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0424300 Os09g0424300|AK102445
(392 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25570.1 | chr3:9287413-9288462 REVERSE LENGTH=350 354 4e-98
AT3G02470.1 | chr3:510223-511323 FORWARD LENGTH=367 347 7e-96
AT5G15950.1 | chr5:5206706-5207794 FORWARD LENGTH=363 340 1e-93
AT5G18930.1 | chr5:6312172-6313215 REVERSE LENGTH=348 266 2e-71
>AT3G25570.1 | chr3:9287413-9288462 REVERSE LENGTH=350
Length = 349
Score = 354 bits (909), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 189/351 (53%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 14 ASPIGFEGYEKRLEITLSDAPVFVDPCGRGLRALSREQIDSFLDLAKCTIVSHLSNKHFD 73
S GFEG+EKRLEI+ + F+DP G+ LR+L++ Q+D L A+CTIVS L+N D
Sbjct: 3 VSATGFEGFEKRLEISFFETTDFLDPQGKSLRSLTKSQLDEILTPAECTIVSSLTNSFVD 62
Query: 74 SYVLSESSLFVYPHKVVLKTCGTTKLLLSIPRILELAAELSLPVLSVKYSRGMFIFPGAQ 133
SYVLSESSLFVYP+K+++KTCGTTKLLLSIP IL LA L L V SV+Y+RG FIFPGAQ
Sbjct: 63 SYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILRLADSLCLTVKSVRYTRGSFIFPGAQ 122
Query: 134 PSPHRSFLEEVSVLNSFFGGLKSGGNAYVIGDAFKPKKKWHVYYA--TEEP---EQPMVT 188
PHRSF EEV++L+ +FG L +G A+V+G + ++WHVY A TEE ++P+ T
Sbjct: 123 SYPHRSFSEEVALLDDYFGKLNAGSKAFVMGGSDNNPQRWHVYSASSTEESAVCDKPVYT 182
Query: 189 LEMCMTGLDAKKAEVFFKDSTDGSCSSAKEMTMFSGISEIIPEMEICDFEFDPCGYSMNG 248
LEMCMTGLD KA VFFK ++ SA EMT+ SGI I+P EICDF F+PCGYSMN
Sbjct: 183 LEMCMTGLDNIKASVFFKTNS----VSASEMTISSGIRNILPGSEICDFNFEPCGYSMNS 238
Query: 249 IYGPAVSTIHVTPEEGFSYASYEAMNFNPSSLVYDDLIKKVLACFCPSDFSVAVTI-FGG 307
I G AVSTIHVTPE+GFSYAS+E + ++ +L + +L+ +VL CF P +FSVAV G
Sbjct: 239 IEGDAVSTIHVTPEDGFSYASFETVGYDLKALNFKELVDRVLVCFGPEEFSVAVHANLGT 298
Query: 308 HGFAKSWAKGAEVDSYMCDDLVEQELPGGGVLMYQSFTAVTPGAVSPRSTL 358
A A+V+ Y + +EL GG ++YQ F T SP+STL
Sbjct: 299 EVLASDCV--ADVNGYFSQERELEELGLGGSVLYQRFVK-TVECCSPKSTL 346
>AT3G02470.1 | chr3:510223-511323 FORWARD LENGTH=367
Length = 366
Score = 347 bits (890), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 194/360 (53%), Positives = 241/360 (66%), Gaps = 16/360 (4%)
Query: 15 SPIGFEGYEKRLEITLSDAPVFVDPCGRGLRALSREQIDSFLDLAKCTIVSHLSNKHFDS 74
S IGFEGYEKRLE+T + +F D G GLRAL++ Q+D L A CTIVS LSN DS
Sbjct: 4 SAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQLDS 63
Query: 75 YVLSESSLFVYPHKVVLKTCGTTKLLLSIPRILELAAELSLPVLSVKYSRGMFIFPGAQP 134
YVLSESS FVYP+KV++KTCGTTKLLLSIP +L+LA ELSL V SVKY+RG F+ PG QP
Sbjct: 64 YVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQP 123
Query: 135 SPHRSFLEEVSVLNSFFGGLKSGGNAYVIGDAFKPKKKWHVYYATEEP----EQPMVTLE 190
PHRSF EEVSVL+ F L AY++G+ KKWHVY A+ + + TLE
Sbjct: 124 FPHRSFSEEVSVLDGHFTQLGLNSVAYLMGND-DETKKWHVYAASAQDSSNCNNNVYTLE 182
Query: 191 MCMTGLDAKKAEVFFKDSTDGSCSSAKEMTMFSGISEIIPEMEICDFEFDPCGYSMNGIY 250
MCMTGLD +KA VF+KD D + S MT SGI +I+P+ EICDFEF+PCGYSMN I
Sbjct: 183 MCMTGLDREKAAVFYKDEADKTGS----MTDNSGIRKILPKSEICDFEFEPCGYSMNSIE 238
Query: 251 GPAVSTIHVTPEEGFSYASYEAMNFNPSSLVYDDLIKKVLACFCPSDFSVAVTIFGGHGF 310
G A+STIHVTPE+GFSYAS+EA+ ++ ++L L+ +VL+CF P FSVAV G
Sbjct: 239 GDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVG--- 295
Query: 311 AKSWAKGAEVD--SYMCDDLVEQEL-PGGGVLMYQSFTAVTPGAVSPRSTLD-GWNSDGA 366
A S+ VD Y C + + L G +MYQ+F + SPRSTL W+S+ +
Sbjct: 296 ANSYKPEITVDLEDYGCRERTFESLGEESGTVMYQTFEKLGKYCGSPRSTLKCEWSSNNS 355
>AT5G15950.1 | chr5:5206706-5207794 FORWARD LENGTH=363
Length = 362
Score = 340 bits (871), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/359 (52%), Positives = 241/359 (67%), Gaps = 15/359 (4%)
Query: 15 SPIGFEGYEKRLEITLSDAPVFVDPCGRGLRALSREQIDSFLDLAKCTIVSHLSNKHFDS 74
S IGFEGYEKRLE+T + +F+D G+GLRAL++ QID L A+CTIVS LSN DS
Sbjct: 4 SAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQLDS 63
Query: 75 YVLSESSLFVYPHKVVLKTCGTTKLLLSIPRILELAAELSLPVLSVKYSRGMFIFPGAQP 134
YVLSESSLF++P+K+V+KTCGTTKLLLSI +L LA ELSL V +V+Y+RG F+ PG QP
Sbjct: 64 YVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPGGQP 123
Query: 135 SPHRSFLEEVSVLNSFFGGLKSGGNAYVIGDAFKPKKKWHVY---YATEEPEQPMVTLEM 191
PHR+F EEVSVL+ F L AY++G+ KKWHVY A + + TLEM
Sbjct: 124 FPHRNFSEEVSVLDGHFAKLGLSSVAYLMGND-DETKKWHVYSASSANSNNKNNVYTLEM 182
Query: 192 CMTGLDAKKAEVFFKDSTDGSCSSAKEMTMFSGISEIIPEMEICDFEFDPCGYSMNGIYG 251
CMTGLD KA VF+K+ + SSA MT SGI +I+P+ +ICDFEF+PCGYSMN I G
Sbjct: 183 CMTGLDKDKASVFYKNES----SSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEG 238
Query: 252 PAVSTIHVTPEEGFSYASYEAMNFNPSSLVYDDLIKKVLACFCPSDFSVAVTIFGGHGFA 311
A+STIHVTPE+GFSYAS+EA+ ++ +++ L+ KVL CF P FSVAV
Sbjct: 239 DAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVAQ--- 295
Query: 312 KSWAKG--AEVDSYMCDDLVEQEL-PGGGVLMYQSFTAVTPGAVSPRSTLD-GWNSDGA 366
KS+ G ++D Y C + + L G +MYQ F + SPRSTL W+S+ +
Sbjct: 296 KSYDSGLSVDLDDYGCKESTMESLGEERGTVMYQRFEKLGRYCGSPRSTLKCEWSSNSS 354
>AT5G18930.1 | chr5:6312172-6313215 REVERSE LENGTH=348
Length = 347
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 203/342 (59%), Gaps = 17/342 (4%)
Query: 18 GFEGYEKRLEITL--SDAPVFVDPCGRGLRALSREQIDSFLDLAKCTIVSHLSNKHFDSY 75
GFEG+EKRLE+ D P+ +P G LR + E +D L+ +CT+VS ++N+ FD+Y
Sbjct: 5 GFEGFEKRLELRFFDDDKPITKNPMG--LRLIDFESLDQVLNEVQCTVVSAVANRSFDAY 62
Query: 76 VLSESSLFVYPHKVVLKTCGTTKLLLSIPRILELAAELSLPVLSVKYSRGMFIFPGAQPS 135
VLSESSLFVYP K+++KTCGTT+LL SI ++ LA L L + + +YSRG FIFP AQP
Sbjct: 63 VLSESSLFVYPTKIIIKTCGTTQLLKSIRPLIHLARNLGLTLRACRYSRGSFIFPKAQPF 122
Query: 136 PHRSFLEEVSVLNSFFGGLKSGGNAYVIGDAFKPKKKWHVYYATE--EPEQPMVTLEMCM 193
P+ SF +EV V+ A V+ + P + WHV+ A+ E ++ +V +E+CM
Sbjct: 123 PYTSFKDEVIVVEESLPKSLCYRKASVMTPSNNPSRAWHVFTASADVESDEHVVVVEVCM 182
Query: 194 TGLDAKKAEVFFK---DSTDGSCSSAKEMTMFSGISEIIPEMEICDFEFDPCGYSMNGIY 250
T LD A FFK D + S S+ KEMT SGI I ICDF FDPCGYSMNG+
Sbjct: 183 TELDRVNARSFFKRKGDEKNNSDSAGKEMTRLSGIDNINANAYICDFAFDPCGYSMNGVD 242
Query: 251 GPAVSTIHVTPEEGFSYASYEA--MNFNPSSLVYDDLIKKVLACFCPSDFSVAVTIFGGH 308
G STIHVTPE+GFSYAS+E ++ +++ + + F PSD S+A T +GG
Sbjct: 243 GDRYSTIHVTPEDGFSYASFECGLSLYDNGHEDISEVLSRAIDVFRPSDVSIATT-YGGE 301
Query: 309 GFAKSWAKGAEVD-----SYMCDDLVEQELPGGGVLMYQSFT 345
+ K E C + E PG G ++YQSFT
Sbjct: 302 DYNHEVTKRVERVLAKKLDLKCRSRLMDEFPGSGTVVYQSFT 343
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,816,320
Number of extensions: 382068
Number of successful extensions: 864
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 848
Number of HSP's successfully gapped: 4
Length of query: 392
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 291
Effective length of database: 8,337,553
Effective search space: 2426227923
Effective search space used: 2426227923
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)